From 63a28eff296f7363c9abe08e8fdd54c4c3faf61c Mon Sep 17 00:00:00 2001 From: Alan Orth Date: Thu, 19 Sep 2019 18:20:04 +0300 Subject: [PATCH] Add notes for 2019-09-19 --- content/posts/2019-09.md | 82 ++++++++++++++++++ docs/2015-11/index.html | 2 +- docs/2015-12/index.html | 2 +- docs/2016-01/index.html | 2 +- docs/2016-02/index.html | 2 +- docs/2016-03/index.html | 2 +- docs/2016-04/index.html | 2 +- docs/2016-05/index.html | 2 +- docs/2016-06/index.html | 2 +- docs/2016-07/index.html | 2 +- docs/2016-08/index.html | 2 +- docs/2016-09/index.html | 2 +- docs/2016-10/index.html | 2 +- docs/2016-11/index.html | 2 +- docs/2016-12/index.html | 2 +- docs/2017-01/index.html | 2 +- docs/2017-02/index.html | 2 +- docs/2017-03/index.html | 2 +- docs/2017-04/index.html | 2 +- docs/2017-05/index.html | 2 +- docs/2017-06/index.html | 2 +- docs/2017-07/index.html | 2 +- docs/2017-08/index.html | 2 +- docs/2017-09/index.html | 2 +- docs/2017-10/index.html | 2 +- docs/2017-11/index.html | 2 +- docs/2017-12/index.html | 2 +- docs/2018-01/index.html | 2 +- docs/2018-02/index.html | 2 +- docs/2018-03/index.html | 2 +- docs/2018-04/index.html | 2 +- docs/2018-05/index.html | 2 +- docs/2018-06/index.html | 2 +- docs/2018-07/index.html | 2 +- docs/2018-08/index.html | 2 +- docs/2018-09/index.html | 2 +- docs/2018-10/index.html | 2 +- docs/2018-11/index.html | 2 +- docs/2018-12/index.html | 2 +- docs/2019-01/index.html | 2 +- docs/2019-02/index.html | 2 +- docs/2019-03/index.html | 2 +- docs/2019-04/index.html | 2 +- docs/2019-05/index.html | 2 +- docs/2019-06/index.html | 2 +- docs/2019-07/index.html | 2 +- docs/2019-08/index.html | 2 +- docs/2019-09/index.html | 105 +++++++++++++++++++++++- docs/404.html | 2 +- docs/categories/index.html | 2 +- docs/categories/notes/index.html | 2 +- docs/categories/page/2/index.html | 2 +- docs/categories/page/3/index.html | 2 +- docs/categories/page/4/index.html | 2 +- docs/categories/page/5/index.html | 2 +- docs/cgiar-library-migration/index.html | 2 +- docs/index.html | 2 +- docs/page/2/index.html | 2 +- docs/page/3/index.html | 2 +- docs/page/4/index.html | 2 +- docs/page/5/index.html | 2 +- docs/posts/index.html | 2 +- docs/posts/page/2/index.html | 2 +- docs/posts/page/3/index.html | 2 +- docs/posts/page/4/index.html | 2 +- docs/posts/page/5/index.html | 2 +- docs/sitemap.xml | 10 +-- docs/tags/index.html | 2 +- docs/tags/notes/index.html | 2 +- docs/tags/notes/page/2/index.html | 2 +- docs/tags/notes/page/3/index.html | 2 +- docs/tags/notes/page/4/index.html | 2 +- docs/tags/notes/page/5/index.html | 2 +- docs/tags/page/2/index.html | 2 +- docs/tags/page/3/index.html | 2 +- docs/tags/page/4/index.html | 2 +- docs/tags/page/5/index.html | 2 +- 77 files changed, 262 insertions(+), 83 deletions(-) diff --git a/content/posts/2019-09.md b/content/posts/2019-09.md index 522eb09ca..7c9d11f4f 100644 --- a/content/posts/2019-09.md +++ b/content/posts/2019-09.md @@ -152,4 +152,86 @@ dspace.log.2019-09-15:808 - I restarted Tomcat and the item views came back, but then the Solr statistics cores didn't all load properly - After restarting Tomcat once again, both the item views and the Solr statistics cores all came back OK +## 2019-09-19 + +- For some reason my podman PostgreSQL container isn't working so I had to use Docker to re-create it for my testing work today: + +``` +# docker pull docker.io/library/postgres:9.6-alpine +# docker create volume dspacedb_data +# docker run --name dspacedb -v dspacedb_data:/var/lib/postgresql/data -e POSTGRES_PASSWORD=postgres -p 5432:5432 -d postgres:9.6-alpine +$ createuser -h localhost -U postgres --pwprompt dspacetest +$ createdb -h localhost -U postgres -O dspacetest --encoding=UNICODE dspacetest +$ psql -h localhost -U postgres dspacetest -c 'alter user dspacetest superuser;' +$ pg_restore -h localhost -U postgres -d dspacetest -O --role=dspacetest -h localhost ~/Downloads/cgspace_2019-08-31.backup +$ psql -h localhost -U postgres dspacetest -c 'alter user dspacetest nosuperuser;' +$ psql -h localhost -U postgres -f ~/src/git/DSpace/dspace/etc/postgres/update-sequences.sql dspacetest +``` + +- Elizabeth from CIAT sent me a list of sixteen authors who need to have their ORCID identifiers tagged with their publications + - I manually checked the ORCID profile links to make sure they matched the names + - Then I created an input file to use with my `add-orcid-identifiers-csv.py` script: + +``` +dc.contributor.author,cg.creator.id +"Kihara, Job","Job Kihara: 0000-0002-4394-9553" +"Twyman, Jennifer","Jennifer Twyman: 0000-0002-8581-5668" +"Ishitani, Manabu","Manabu Ishitani: 0000-0002-6950-4018" +"Arango, Jacobo","Jacobo Arango: 0000-0002-4828-9398" +"Chavarriaga Aguirre, Paul","Paul Chavarriaga-Aguirre: 0000-0001-7579-3250" +"Paul, Birthe","Birthe Paul: 0000-0002-5994-5354" +"Eitzinger, Anton","Anton Eitzinger: 0000-0001-7317-3381" +"Hoek, Rein van der","Rein van der Hoek: 0000-0003-4528-7669" +"Aranzales Rondón, Ericson","Ericson Aranzales Rondon: 0000-0001-7487-9909" +"Staiger-Rivas, Simone","Simone Staiger: 0000-0002-3539-0817" +"de Haan, Stef","Stef de Haan: 0000-0001-8690-1886" +"Pulleman, Mirjam","Mirjam Pulleman: 0000-0001-9950-0176" +"Abera, Wuletawu","Wuletawu Abera: 0000-0002-3657-5223" +"Tamene, Lulseged","Lulseged Tamene: 0000-0002-3806-8890" +"Andrieu, Nadine","Nadine Andrieu: 0000-0001-9558-9302" +"Ramírez-Villegas, Julián","Julian Ramirez-Villegas: 0000-0002-8044-583X" +``` + +- I tested the file on my local development machine with the following invocation: + +``` +$ ./add-orcid-identifiers-csv.py -i 2019-09-19-ciat-orcids.csv -db dspace -u dspace -p 'fuuu' +``` + +- In my test environment this added 390 ORCID identifier +- I ran the same updates on CGSpace and DSpace Test and then started a Discovery re-index to force the search index to update +- Update the PostgreSQL JDBC driver to version 42.2.8 in our [Ansible infrastructure scripts](https://github.com/ilri/rmg-ansible-public) + - There is only [one minor fix to a usecase we aren't using](https://github.com/pgjdbc/pgjdbc/issues/1567) so I will deploy this on the servers the next time I do updates +- Run system updates on DSpace Test (linode19) and reboot it +- Start looking at IITA's latest round of batch updates that Sisay had [uploaded to DSpace Test](https://dspacetest.cgiar.org/handle/10568/105486) earlier this month + - For posterity, IITA's original input file was 20196th.xls and Sisay uploaded it as "IITA_Sep_06" to DSpace Test + - Sisay said he did ran the csv-metadata-quality script on the records, but I assume he didn't run the unsafe fixes or AGROVOC checks because I still see unneccessary Unicode, excessive whitespace, one invalid ISBN, missing dates and a few invalid AGROVOC fields + - In addition, a few records were missing authorship type + - I deleted two invalid AGROVOC terms because they were ambiguous + - Validate and normalize affiliations against our 2019-04 list using reconcile-csv and OpenRefine: + - `$ lein run ~/src/git/DSpace/2019-04-08-affiliations.csv name id` + - I always forget how to copy the reconciled values in OpenRefine, but you need to make a new colum and populate it using this GREL: `if(cell.recon.matched, cell.recon.match.name, value)` + - I also looked through the IITA subjects to normalize some values +- Follow up with Marissa again about the CCAFS phase II project tags +- Generate a list of the top 1500 authors on CGSpace: + +``` +dspace=# \copy (SELECT DISTINCT text_value, count(*) FROM metadatavalue WHERE metadata_field_id = (SELECT metadata_field_id FROM metadatafieldregistry WHERE element = 'contributor' AND qualifier = 'author') AND resource_type_id = 2 GROUP BY text_value ORDER BY count DESC LIMIT 1500) to /tmp/2019-09-19-top-1500-authors.csv WITH CSV HEADER; +``` + +- Then I used `csvcut` to select the column of author names, strip the header and quote characters, and saved the sorted file: + +``` +$ csvcut -c text_value /tmp/2019-09-19-top-1500-authors.csv | grep -v text_value | sed 's/"//g' | sort > dspace/config/controlled-vocabularies/dc-contributor-author.xml +``` + +- After adding the XML formatting back to the file I formatted it using XML tidy: + +``` +$ tidy -xml -utf8 -m -iq -w 0 dspace/config/controlled-vocabularies/dc-contributor-author.xml +``` + +- I created and merged [a pull request for the updates](https://github.com/ilri/DSpace/pull/433) + - This is the first time we've updated this controlled vocabulary since 2018-09 + diff --git a/docs/2015-11/index.html b/docs/2015-11/index.html index aabc6c44b..1f76f9193 100644 --- a/docs/2015-11/index.html +++ b/docs/2015-11/index.html @@ -37,7 +37,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac 78 "/> - + diff --git a/docs/2015-12/index.html b/docs/2015-12/index.html index 6a934d491..9d0b9db35 100644 --- a/docs/2015-12/index.html +++ b/docs/2015-12/index.html @@ -37,7 +37,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less -rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz "/> - + diff --git a/docs/2016-01/index.html b/docs/2016-01/index.html index 8d99f0848..af9b8ea5d 100644 --- a/docs/2016-01/index.html +++ b/docs/2016-01/index.html @@ -27,7 +27,7 @@ Move ILRI collection 10568/12503 from 10568/27869 to 10568/27629 using the move_ I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated. Update GitHub wiki for documentation of maintenance tasks. "/> - + diff --git a/docs/2016-02/index.html b/docs/2016-02/index.html index 7a2f5fe91..1b97cbd98 100644 --- a/docs/2016-02/index.html +++ b/docs/2016-02/index.html @@ -41,7 +41,7 @@ I noticed we have a very interesting list of countries on CGSpace: Not only are there 49,000 countries, we have some blanks (25)… Also, lots of things like “COTE D`LVOIRE” and “COTE D IVOIRE” "/> - + diff --git a/docs/2016-03/index.html b/docs/2016-03/index.html index a1ab6220c..95c43f53c 100644 --- a/docs/2016-03/index.html +++ b/docs/2016-03/index.html @@ -27,7 +27,7 @@ Looking at issues with author authorities on CGSpace For some reason we still have the index-lucene-update cron job active on CGSpace, but I’m pretty sure we don’t need it as of the latest few versions of Atmire’s Listings and Reports module Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Java JDK 1.7 to match environment on CGSpace server "/> - + diff --git a/docs/2016-04/index.html b/docs/2016-04/index.html index a01156f80..0e02d3039 100644 --- a/docs/2016-04/index.html +++ b/docs/2016-04/index.html @@ -31,7 +31,7 @@ After running DSpace for over five years I’ve never needed to look in any This will save us a few gigs of backup space we’re paying for on S3 Also, I noticed the checker log has some errors we should pay attention to: "/> - + diff --git a/docs/2016-05/index.html b/docs/2016-05/index.html index 6226b6c98..8492b6f86 100644 --- a/docs/2016-05/index.html +++ b/docs/2016-05/index.html @@ -37,7 +37,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period! 3168 "/> - + diff --git a/docs/2016-06/index.html b/docs/2016-06/index.html index c2a40a6c2..325dd7d2e 100644 --- a/docs/2016-06/index.html +++ b/docs/2016-06/index.html @@ -33,7 +33,7 @@ This is their publications set: http://ebrary.ifpri.org/oai/oai.php?verb=ListRec You can see the others by using the OAI ListSets verb: http://ebrary.ifpri.org/oai/oai.php?verb=ListSets Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in dc.identifier.fund to cg.identifier.cpwfproject and then the rest to dc.description.sponsorship "/> - + diff --git a/docs/2016-07/index.html b/docs/2016-07/index.html index 4af85e918..6a4bd6c57 100644 --- a/docs/2016-07/index.html +++ b/docs/2016-07/index.html @@ -47,7 +47,7 @@ text_value In this case the select query was showing 95 results before the update "/> - + diff --git a/docs/2016-08/index.html b/docs/2016-08/index.html index b893eebde..0b8a541e7 100644 --- a/docs/2016-08/index.html +++ b/docs/2016-08/index.html @@ -45,7 +45,7 @@ $ git reset --hard ilri/5_x-prod $ git rebase -i dspace-5.5 "/> - + diff --git a/docs/2016-09/index.html b/docs/2016-09/index.html index fd53d2973..4b8e29ba7 100644 --- a/docs/2016-09/index.html +++ b/docs/2016-09/index.html @@ -37,7 +37,7 @@ It looks like we might be able to use OUs now, instead of DCs: $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=org" -D "admigration1@cgiarad.org" -W "(sAMAccountName=admigration1)" "/> - + diff --git a/docs/2016-10/index.html b/docs/2016-10/index.html index 647c97bdb..476ec6f42 100644 --- a/docs/2016-10/index.html +++ b/docs/2016-10/index.html @@ -45,7 +45,7 @@ I exported a random item’s metadata as CSV, deleted all columns except id 0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X "/> - + diff --git a/docs/2016-11/index.html b/docs/2016-11/index.html index 9ff343cfe..eb83a0654 100644 --- a/docs/2016-11/index.html +++ b/docs/2016-11/index.html @@ -27,7 +27,7 @@ Add dc.type to the output options for Atmire’s Listings and Reports module "/> - + diff --git a/docs/2016-12/index.html b/docs/2016-12/index.html index 6b59573a1..02a719d7d 100644 --- a/docs/2016-12/index.html +++ b/docs/2016-12/index.html @@ -53,7 +53,7 @@ I’ve raised a ticket with Atmire to ask Another worrying error from dspace.log is: "/> - + diff --git a/docs/2017-01/index.html b/docs/2017-01/index.html index 517eb278e..319cc6eea 100644 --- a/docs/2017-01/index.html +++ b/docs/2017-01/index.html @@ -27,7 +27,7 @@ I checked to see if the Solr sharding task that is supposed to run on January 1s I tested on DSpace Test as well and it doesn’t work there either I asked on the dspace-tech mailing list because it seems to be broken, and actually now I’m not sure if we’ve ever had the sharding task run successfully over all these years "/> - + diff --git a/docs/2017-02/index.html b/docs/2017-02/index.html index a84d11c3d..413e224ea 100644 --- a/docs/2017-02/index.html +++ b/docs/2017-02/index.html @@ -53,7 +53,7 @@ Create issue on GitHub to track the addition of CCAFS Phase II project tags (#30 Looks like we’ll be using cg.identifier.ccafsprojectpii as the field name "/> - + diff --git a/docs/2017-03/index.html b/docs/2017-03/index.html index 1fe694366..959f5a4fd 100644 --- a/docs/2017-03/index.html +++ b/docs/2017-03/index.html @@ -61,7 +61,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg /Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000 "/> - + diff --git a/docs/2017-04/index.html b/docs/2017-04/index.html index 372e42c29..8aafd5e71 100644 --- a/docs/2017-04/index.html +++ b/docs/2017-04/index.html @@ -47,7 +47,7 @@ Testing the CMYK patch on a collection with 650 items: $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p "ImageMagick PDF Thumbnail" -v >& /tmp/filter-media-cmyk.txt "/> - + diff --git a/docs/2017-05/index.html b/docs/2017-05/index.html index 066e772ed..05d338e09 100644 --- a/docs/2017-05/index.html +++ b/docs/2017-05/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/2017-06/index.html b/docs/2017-06/index.html index bd52d13a8..c97d17df7 100644 --- a/docs/2017-06/index.html +++ b/docs/2017-06/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/2017-07/index.html b/docs/2017-07/index.html index 1156c12f4..d67304833 100644 --- a/docs/2017-07/index.html +++ b/docs/2017-07/index.html @@ -39,7 +39,7 @@ Merge changes for WLE Phase II theme rename (#329) Looking at extracting the metadata registries from ICARDA’s MEL DSpace database so we can compare fields with CGSpace We can use PostgreSQL’s extended output format (-x) plus sed to format the output into quasi XML: "/> - + diff --git a/docs/2017-08/index.html b/docs/2017-08/index.html index 5926fd8c7..e4b395440 100644 --- a/docs/2017-08/index.html +++ b/docs/2017-08/index.html @@ -59,7 +59,7 @@ This was due to newline characters in the dc.description.abstract column, which I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using g/^$/d Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet "/> - + diff --git a/docs/2017-09/index.html b/docs/2017-09/index.html index e21e76fea..a9fff9f28 100644 --- a/docs/2017-09/index.html +++ b/docs/2017-09/index.html @@ -35,7 +35,7 @@ Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two Ask Sisay to clean up the WLE approvers a bit, as Marianne’s user account is both in the approvers step as well as the group "/> - + diff --git a/docs/2017-10/index.html b/docs/2017-10/index.html index 8bfab35b1..2ec06ef65 100644 --- a/docs/2017-10/index.html +++ b/docs/2017-10/index.html @@ -37,7 +37,7 @@ There appears to be a pattern but I’ll have to look a bit closer and try t Add Katherine Lutz to the groups for content submission and edit steps of the CGIAR System collections "/> - + diff --git a/docs/2017-11/index.html b/docs/2017-11/index.html index f5df1f245..2c5fc90d0 100644 --- a/docs/2017-11/index.html +++ b/docs/2017-11/index.html @@ -55,7 +55,7 @@ dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue COPY 54701 "/> - + diff --git a/docs/2017-12/index.html b/docs/2017-12/index.html index c56ebf4a6..597535068 100644 --- a/docs/2017-12/index.html +++ b/docs/2017-12/index.html @@ -29,7 +29,7 @@ The logs say “Timeout waiting for idle object” PostgreSQL activity says there are 115 connections currently The list of connections to XMLUI and REST API for today: "/> - + diff --git a/docs/2018-01/index.html b/docs/2018-01/index.html index 5fced2aa9..4e2a025b1 100644 --- a/docs/2018-01/index.html +++ b/docs/2018-01/index.html @@ -163,7 +163,7 @@ dspace.log.2018-01-02:34 Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let’s Encrypt if it’s just a handful of domains "/> - + diff --git a/docs/2018-02/index.html b/docs/2018-02/index.html index 11d50557a..3b856e99e 100644 --- a/docs/2018-02/index.html +++ b/docs/2018-02/index.html @@ -29,7 +29,7 @@ We don’t need to distinguish between internal and external works, so that Yesterday I figured out how to monitor DSpace sessions using JMX I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu’s munin-plugins-java package and used the stuff I discovered about JMX in 2018-01 "/> - + diff --git a/docs/2018-03/index.html b/docs/2018-03/index.html index 94825729d..cfb9d0369 100644 --- a/docs/2018-03/index.html +++ b/docs/2018-03/index.html @@ -23,7 +23,7 @@ Export a CSV of the IITA community metadata for Martin Mueller Export a CSV of the IITA community metadata for Martin Mueller "/> - + diff --git a/docs/2018-04/index.html b/docs/2018-04/index.html index 804a687c8..d989338f3 100644 --- a/docs/2018-04/index.html +++ b/docs/2018-04/index.html @@ -25,7 +25,7 @@ Catalina logs at least show some memory errors yesterday: I tried to test something on DSpace Test but noticed that it’s down since god knows when Catalina logs at least show some memory errors yesterday: "/> - + diff --git a/docs/2018-05/index.html b/docs/2018-05/index.html index 303446581..15acfb0a7 100644 --- a/docs/2018-05/index.html +++ b/docs/2018-05/index.html @@ -37,7 +37,7 @@ http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E Then I reduced the JVM heap size from 6144 back to 5120m Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the Ansible infrastructure scripts to support hosts choosing which distribution they want to use "/> - + diff --git a/docs/2018-06/index.html b/docs/2018-06/index.html index ec5048e29..b7e547562 100644 --- a/docs/2018-06/index.html +++ b/docs/2018-06/index.html @@ -65,7 +65,7 @@ user 8m5.056s sys 2m7.289s "/> - + diff --git a/docs/2018-07/index.html b/docs/2018-07/index.html index 812fa8428..4de8aa202 100644 --- a/docs/2018-07/index.html +++ b/docs/2018-07/index.html @@ -39,7 +39,7 @@ During the mvn package stage on the 5.8 branch I kept getting issues with java r There is insufficient memory for the Java Runtime Environment to continue. "/> - + diff --git a/docs/2018-08/index.html b/docs/2018-08/index.html index 1f03bf45c..629300df4 100644 --- a/docs/2018-08/index.html +++ b/docs/2018-08/index.html @@ -57,7 +57,7 @@ The server only has 8GB of RAM so we’ll eventually need to upgrade to a la I ran all system updates on DSpace Test and rebooted it "/> - + diff --git a/docs/2018-09/index.html b/docs/2018-09/index.html index e19755ab5..d4a159d0d 100644 --- a/docs/2018-09/index.html +++ b/docs/2018-09/index.html @@ -29,7 +29,7 @@ I’ll update the DSpace role in our Ansible infrastructure playbooks and ru Also, I’ll re-run the postgresql tasks because the custom PostgreSQL variables are dynamic according to the system’s RAM, and we never re-ran them after migrating to larger Linodes last month I’m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I’m getting those autowire errors in Tomcat 8.5.30 again: "/> - + diff --git a/docs/2018-10/index.html b/docs/2018-10/index.html index 5b01edc4c..39bb3566a 100644 --- a/docs/2018-10/index.html +++ b/docs/2018-10/index.html @@ -25,7 +25,7 @@ I created a GitHub issue to track this #389, because I’m super busy in Nai Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items I created a GitHub issue to track this #389, because I’m super busy in Nairobi right now "/> - + diff --git a/docs/2018-11/index.html b/docs/2018-11/index.html index f422352e7..4d304eb26 100644 --- a/docs/2018-11/index.html +++ b/docs/2018-11/index.html @@ -39,7 +39,7 @@ Send a note about my dspace-statistics-api to the dspace-tech mailing list Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage Today these are the top 10 IPs: "/> - + diff --git a/docs/2018-12/index.html b/docs/2018-12/index.html index 95fc1cdb9..2371b3dee 100644 --- a/docs/2018-12/index.html +++ b/docs/2018-12/index.html @@ -39,7 +39,7 @@ Then I ran all system updates and restarted the server I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another Ghostscript vulnerability last week "/> - + diff --git a/docs/2019-01/index.html b/docs/2019-01/index.html index c423771a2..46653ac1e 100644 --- a/docs/2019-01/index.html +++ b/docs/2019-01/index.html @@ -53,7 +53,7 @@ I don’t see anything interesting in the web server logs around that time t 903 54.70.40.11 "/> - + diff --git a/docs/2019-02/index.html b/docs/2019-02/index.html index 38c5c4bf3..ec9ea768f 100644 --- a/docs/2019-02/index.html +++ b/docs/2019-02/index.html @@ -81,7 +81,7 @@ user 0m22.203s sys 0m1.979s "/> - + diff --git a/docs/2019-03/index.html b/docs/2019-03/index.html index f05c3a0e4..a051663e5 100644 --- a/docs/2019-03/index.html +++ b/docs/2019-03/index.html @@ -45,7 +45,7 @@ Most worryingly, there are encoding errors in the abstracts for eleven items, fo I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs "/> - + diff --git a/docs/2019-04/index.html b/docs/2019-04/index.html index 659e37e77..63189f5bd 100644 --- a/docs/2019-04/index.html +++ b/docs/2019-04/index.html @@ -71,7 +71,7 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspa $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d "/> - + diff --git a/docs/2019-05/index.html b/docs/2019-05/index.html index 232874706..d2df507d7 100644 --- a/docs/2019-05/index.html +++ b/docs/2019-05/index.html @@ -51,7 +51,7 @@ DELETE 1 But after this I tried to delete the item from the XMLUI and it is still present… "/> - + diff --git a/docs/2019-06/index.html b/docs/2019-06/index.html index 88bdbeb55..a1f42d976 100644 --- a/docs/2019-06/index.html +++ b/docs/2019-06/index.html @@ -37,7 +37,7 @@ Run system updates on CGSpace (linode18) and reboot it Skype with Marie-Angélique and Abenet about CG Core v2 "/> - + diff --git a/docs/2019-07/index.html b/docs/2019-07/index.html index 591f3cda8..c081437b9 100644 --- a/docs/2019-07/index.html +++ b/docs/2019-07/index.html @@ -37,7 +37,7 @@ CGSpace Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community "/> - + diff --git a/docs/2019-08/index.html b/docs/2019-08/index.html index 743b29034..76d169dd0 100644 --- a/docs/2019-08/index.html +++ b/docs/2019-08/index.html @@ -49,7 +49,7 @@ After rebooting, all statistics cores were loaded… wow, that’s luck Run system updates on DSpace Test (linode19) and reboot it "/> - + diff --git a/docs/2019-09/index.html b/docs/2019-09/index.html index d67d4661d..2c1811d4e 100644 --- a/docs/2019-09/index.html +++ b/docs/2019-09/index.html @@ -40,7 +40,7 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning: - + @@ -75,7 +75,7 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning: 9124 45.5.186.2 "/> - + @@ -85,9 +85,9 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning: "@type": "BlogPosting", "headline": "September, 2019", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-09\/", - "wordCount": "1000", + "wordCount": "1636", "datePublished": "2019-09-01T10:17:51\x2b03:00", - "dateModified": "2019-09-12T18:21:43\x2b03:00", + "dateModified": "2019-09-15T17:29:48\x2b03:00", "author": { "@type": "Person", "name": "Alan Orth" @@ -338,6 +338,103 @@ dspace.log.2019-09-15:808 +

2019-09-19

+ + + diff --git a/docs/404.html b/docs/404.html index bfddb1477..b6f721b52 100644 --- a/docs/404.html +++ b/docs/404.html @@ -14,7 +14,7 @@ - + diff --git a/docs/categories/index.html b/docs/categories/index.html index 6716fd40e..0b40aa7f9 100644 --- a/docs/categories/index.html +++ b/docs/categories/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/categories/notes/index.html b/docs/categories/notes/index.html index e6ee63830..49e003911 100644 --- a/docs/categories/notes/index.html +++ b/docs/categories/notes/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/categories/page/2/index.html b/docs/categories/page/2/index.html index 6fcc427ce..05ce8d52a 100644 --- a/docs/categories/page/2/index.html +++ b/docs/categories/page/2/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/categories/page/3/index.html b/docs/categories/page/3/index.html index 6f45e5a21..34331a1b6 100644 --- a/docs/categories/page/3/index.html +++ b/docs/categories/page/3/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/categories/page/4/index.html b/docs/categories/page/4/index.html index b3d6b04cf..594074ae1 100644 --- a/docs/categories/page/4/index.html +++ b/docs/categories/page/4/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/categories/page/5/index.html b/docs/categories/page/5/index.html index 000f26b1d..e667ff7bb 100644 --- a/docs/categories/page/5/index.html +++ b/docs/categories/page/5/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/cgiar-library-migration/index.html b/docs/cgiar-library-migration/index.html index 5045e76d8..c146cff69 100644 --- a/docs/cgiar-library-migration/index.html +++ b/docs/cgiar-library-migration/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/index.html b/docs/index.html index 8e2013a97..4ac8f46ee 100644 --- a/docs/index.html +++ b/docs/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/page/2/index.html b/docs/page/2/index.html index 53a5320d9..486499a15 100644 --- a/docs/page/2/index.html +++ b/docs/page/2/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/page/3/index.html b/docs/page/3/index.html index cf2bb0254..134228981 100644 --- a/docs/page/3/index.html +++ b/docs/page/3/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/page/4/index.html b/docs/page/4/index.html index d9ffdbd6d..ca4ca045f 100644 --- a/docs/page/4/index.html +++ b/docs/page/4/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/page/5/index.html b/docs/page/5/index.html index 99a105c13..51bf6a790 100644 --- a/docs/page/5/index.html +++ b/docs/page/5/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/posts/index.html b/docs/posts/index.html index 4622ccd45..04f052e45 100644 --- a/docs/posts/index.html +++ b/docs/posts/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/posts/page/2/index.html b/docs/posts/page/2/index.html index 9e9ae6071..73910ad51 100644 --- a/docs/posts/page/2/index.html +++ b/docs/posts/page/2/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/posts/page/3/index.html b/docs/posts/page/3/index.html index b20c5e018..c36fa988d 100644 --- a/docs/posts/page/3/index.html +++ b/docs/posts/page/3/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/posts/page/4/index.html b/docs/posts/page/4/index.html index 97638766c..8a4ec5c74 100644 --- a/docs/posts/page/4/index.html +++ b/docs/posts/page/4/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/posts/page/5/index.html b/docs/posts/page/5/index.html index 6898423b8..81ea11320 100644 --- a/docs/posts/page/5/index.html +++ b/docs/posts/page/5/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/sitemap.xml b/docs/sitemap.xml index 736ecb686..dfef1e6e6 100644 --- a/docs/sitemap.xml +++ b/docs/sitemap.xml @@ -4,27 +4,27 @@ https://alanorth.github.io/cgspace-notes/ - 2019-09-12T18:21:43+03:00 + 2019-09-15T17:29:48+03:00 https://alanorth.github.io/cgspace-notes/tags/notes/ - 2019-09-12T18:21:43+03:00 + 2019-09-15T17:29:48+03:00 https://alanorth.github.io/cgspace-notes/posts/ - 2019-09-12T18:21:43+03:00 + 2019-09-15T17:29:48+03:00 https://alanorth.github.io/cgspace-notes/2019-09/ - 2019-09-12T18:21:43+03:00 + 2019-09-15T17:29:48+03:00 https://alanorth.github.io/cgspace-notes/tags/ - 2019-09-12T18:21:43+03:00 + 2019-09-15T17:29:48+03:00 diff --git a/docs/tags/index.html b/docs/tags/index.html index 5629038d0..b4f173c5b 100644 --- a/docs/tags/index.html +++ b/docs/tags/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/notes/index.html b/docs/tags/notes/index.html index 585995d27..0fbc6c441 100644 --- a/docs/tags/notes/index.html +++ b/docs/tags/notes/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/notes/page/2/index.html b/docs/tags/notes/page/2/index.html index 68a4c9850..9952c4ce2 100644 --- a/docs/tags/notes/page/2/index.html +++ b/docs/tags/notes/page/2/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/notes/page/3/index.html b/docs/tags/notes/page/3/index.html index b2ce86ab9..16615b13a 100644 --- a/docs/tags/notes/page/3/index.html +++ b/docs/tags/notes/page/3/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/notes/page/4/index.html b/docs/tags/notes/page/4/index.html index 587160416..0f366a26f 100644 --- a/docs/tags/notes/page/4/index.html +++ b/docs/tags/notes/page/4/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/notes/page/5/index.html b/docs/tags/notes/page/5/index.html index 57341edf2..3bb91fd72 100644 --- a/docs/tags/notes/page/5/index.html +++ b/docs/tags/notes/page/5/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/page/2/index.html b/docs/tags/page/2/index.html index 416938970..0e9768424 100644 --- a/docs/tags/page/2/index.html +++ b/docs/tags/page/2/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/page/3/index.html b/docs/tags/page/3/index.html index b5c0564d9..0d4f9f344 100644 --- a/docs/tags/page/3/index.html +++ b/docs/tags/page/3/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/page/4/index.html b/docs/tags/page/4/index.html index be9092497..93fd2c8e2 100644 --- a/docs/tags/page/4/index.html +++ b/docs/tags/page/4/index.html @@ -15,7 +15,7 @@ - + diff --git a/docs/tags/page/5/index.html b/docs/tags/page/5/index.html index 9f4f055c4..90f941c9a 100644 --- a/docs/tags/page/5/index.html +++ b/docs/tags/page/5/index.html @@ -15,7 +15,7 @@ - +