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Add notes for 2017-09-25

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Alan Orth
2017-09-25 14:22:55 +03:00
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@ -473,3 +473,50 @@ isNotNull(value.match(/.+?10568\/3(\|\|.+|$)/))
- Peter also made a lot of changes to the data in the Archives collections while I was attempting to import the changes, so we were essentially competing for PostgreSQL and Solr connections
- I ended up having to kill the import and wait until he was done
- I exported a clean CSV and applied the changes from that one, which was a hundred or two less than I thought there should be (at least compared to the current state of DSpace Test, which is a few months old)
## 2017-09-25
- Email Rosemary Kande from ICT to ask about the administrative / finance procedure for moving DSpace Test from EU to US region on Linode
- Communicate (finally) with Tania and Tunji from the CGIAR System Organization office to tell them to request CGNET make the DNS updates for library.cgiar.org
- Peter wants me to clean up the text values for Delia Grace's metadata, as the authorities are all messed up again since we cleaned them up in [2016-12](/cgspace-notes/2016-12):
```
dspace=# select distinct text_value, authority, confidence from metadatavalue where resource_type_id=2 and metadata_field_id=3 and text_value like 'Grace, D%';
text_value | authority | confidence
--------------+--------------------------------------+------------
Grace, Delia | | 600
Grace, Delia | bfa61d7c-7583-4175-991c-2e7315000f0c | 600
Grace, Delia | bfa61d7c-7583-4175-991c-2e7315000f0c | -1
Grace, D. | 6a8ddca3-33c1-45f9-aa00-6fa9fc91e3fc | -1
```
- Strangely, none of her authority entries have ORCIDs anymore...
- I'll just fix the text values and forget about it for now:
```
dspace=# update metadatavalue set text_value='Grace, Delia', authority='bfa61d7c-7583-4175-991c-2e7315000f0c', confidence=600 where resource_type_id=2 and metadata_field_id=3 and text_value like 'Grace, D%';
UPDATE 610
```
- After this we have to reindex the Discovery and Authority cores (as `tomcat7` user):
```
$ export JAVA_OPTS="-Dfile.encoding=UTF-8 -Xmx1024m -XX:+TieredCompilation -XX:TieredStopAtLevel=1"
$ time schedtool -D -e ionice -c2 -n7 nice -n19 [dspace]/bin/dspace index-discovery -b
real 83m56.895s
user 13m16.320s
sys 2m17.917s
$ time schedtool -D -e ionice -c2 -n7 nice -n19 [dspace]/bin/dspace index-authority -b
```
- Something interesting for my notes about JNDI database pool—since I couldn't determine if it was working or not when I tried it locally the other day—is this error message that I just saw in the DSpace logs today:
```
ERROR org.dspace.storage.rdbms.DatabaseManager @ Error retrieving JNDI context: jdbc/dspaceLocal
...
INFO org.dspace.storage.rdbms.DatabaseManager @ Unable to locate JNDI dataSource: jdbc/dspaceLocal
INFO org.dspace.storage.rdbms.DatabaseManager @ Falling back to creating own Database pool
```
- So it's good to know that _something_ gets printed when it fails because I didn't see _any_ mention of JNDI before when I was testing!