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Add notes for 2022-04-04
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
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<meta property="og:type" content="website" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
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<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
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<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
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@ -122,6 +122,24 @@
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-03/">April, 2022</a></h2>
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<p class="blog-post-meta"><time datetime="2022-03-01T10:53:39+03:00">Tue Mar 01, 2022</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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2022-04-01 I did G1GC tests on DSpace Test (linode26) to compliment the CMS tests I did yesterday The Discovery indexing took this long: real 334m33.625s user 227m51.331s sys 3m43.037s 2022-04-04 Start a full harvest on AReS Help Marianne with submit/approve access on a new collection on CGSpace Go back in Gaia’s batch reports to find records that she indicated for replacing on CGSpace (ie, those with better new copies, new versions, etc)
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<a href='https://alanorth.github.io/cgspace-notes/2022-03/'>Read more →</a>
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</article>
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2022-02/">February, 2022</a></h2>
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@ -338,33 +356,6 @@
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2021-06/">June, 2021</a></h2>
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<p class="blog-post-meta"><time datetime="2021-06-01T10:51:07+03:00">Tue Jun 01, 2021</time> by Alan Orth in
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
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</p>
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</header>
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<h2 id="2021-06-01">2021-06-01</h2>
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<ul>
|
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<li>IWMI notified me that AReS was down with an HTTP 502 error
|
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<ul>
|
||||
<li>Looking at UptimeRobot I see it has been down for 33 hours, but I never got a notification</li>
|
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<li>I don’t see anything in the Elasticsearch container logs, or the systemd journal on the host, but I notice that the <code>angular_nginx</code> container isn’t running</li>
|
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<li>I simply started it and AReS was running again:</li>
|
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</ul>
|
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</li>
|
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</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2021-06/'>Read more →</a>
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</article>
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<nav class="blog-pagination">
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@ -391,14 +382,14 @@
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<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
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|
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<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
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|
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<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
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<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
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|
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<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
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|
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<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
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</ol>
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</section>
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@ -24,6 +24,15 @@
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</span></span></code></pre></div></description>
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</item>
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<item>
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<title>April, 2022</title>
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<link>https://alanorth.github.io/cgspace-notes/2022-03/</link>
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<pubDate>Tue, 01 Mar 2022 10:53:39 +0300</pubDate>
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<guid>https://alanorth.github.io/cgspace-notes/2022-03/</guid>
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<description>2022-04-01 I did G1GC tests on DSpace Test (linode26) to compliment the CMS tests I did yesterday The Discovery indexing took this long: real 334m33.625s user 227m51.331s sys 3m43.037s 2022-04-04 Start a full harvest on AReS Help Marianne with submit/approve access on a new collection on CGSpace Go back in Gaia&rsquo;s batch reports to find records that she indicated for replacing on CGSpace (ie, those with better new copies, new versions, etc) </description>
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</item>
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<item>
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<title>February, 2022</title>
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<link>https://alanorth.github.io/cgspace-notes/2022-02/</link>
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@ -10,7 +10,7 @@
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
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<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
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<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
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<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
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@ -96,6 +96,33 @@
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<article class="blog-post">
|
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2021-06/">June, 2021</a></h2>
|
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<p class="blog-post-meta"><time datetime="2021-06-01T10:51:07+03:00">Tue Jun 01, 2021</time> by Alan Orth in
|
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
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</p>
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</header>
|
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<h2 id="2021-06-01">2021-06-01</h2>
|
||||
<ul>
|
||||
<li>IWMI notified me that AReS was down with an HTTP 502 error
|
||||
<ul>
|
||||
<li>Looking at UptimeRobot I see it has been down for 33 hours, but I never got a notification</li>
|
||||
<li>I don’t see anything in the Elasticsearch container logs, or the systemd journal on the host, but I notice that the <code>angular_nginx</code> container isn’t running</li>
|
||||
<li>I simply started it and AReS was running again:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2021-06/'>Read more →</a>
|
||||
</article>
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2021-05/">May, 2021</a></h2>
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@ -345,37 +372,6 @@
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<article class="blog-post">
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||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-10/">October, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-10-06T16:55:54+03:00">Tue Oct 06, 2020</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
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</p>
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</header>
|
||||
<h2 id="2020-10-06">2020-10-06</h2>
|
||||
<ul>
|
||||
<li>Add tests for the new <code>/items</code> POST handlers to the DSpace 6.x branch of my <a href="https://github.com/ilri/dspace-statistics-api/tree/v6_x">dspace-statistics-api</a>
|
||||
<ul>
|
||||
<li>It took a bit of extra work because I had to learn how to mock the responses for when Solr is not available</li>
|
||||
<li>Tag and release version 1.3.0 on GitHub: <a href="https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0">https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0</a></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>Trying to test the changes Atmire sent last week but I had to re-create my local database from a recent CGSpace dump
|
||||
<ul>
|
||||
<li>During the FlywayDB migration I got an error:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-10/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
|
||||
@ -402,14 +398,14 @@
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
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||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
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||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
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||||
|
||||
|
||||
|
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@ -96,6 +96,37 @@
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|
||||
|
||||
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||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-10/">October, 2020</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2020-10-06T16:55:54+03:00">Tue Oct 06, 2020</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2020-10-06">2020-10-06</h2>
|
||||
<ul>
|
||||
<li>Add tests for the new <code>/items</code> POST handlers to the DSpace 6.x branch of my <a href="https://github.com/ilri/dspace-statistics-api/tree/v6_x">dspace-statistics-api</a>
|
||||
<ul>
|
||||
<li>It took a bit of extra work because I had to learn how to mock the responses for when Solr is not available</li>
|
||||
<li>Tag and release version 1.3.0 on GitHub: <a href="https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0">https://github.com/ilri/dspace-statistics-api/releases/tag/v1.3.0</a></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li>Trying to test the changes Atmire sent last week but I had to re-create my local database from a recent CGSpace dump
|
||||
<ul>
|
||||
<li>During the FlywayDB migration I got an error:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2020-10/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
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|
||||
|
||||
|
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-09/">September, 2020</a></h2>
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@ -364,38 +395,6 @@
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<article class="blog-post">
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<header>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
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<p class="blog-post-meta"><time datetime="2019-12-01T11:22:30+02:00">Sun Dec 01, 2019</time> by Alan Orth in
|
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<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
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|
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</p>
|
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</header>
|
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<h2 id="2019-12-01">2019-12-01</h2>
|
||||
<ul>
|
||||
<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
|
||||
<ul>
|
||||
<li>Check any packages that have residual configs and purge them:</li>
|
||||
<li><!-- raw HTML omitted --># dpkg -l | grep -E ‘^rc’ | awk ‘{print $2}’ | xargs dpkg -P<!-- raw HTML omitted --></li>
|
||||
<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
|
||||
</ul>
|
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</li>
|
||||
</ul>
|
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<pre tabindex="0"><code># apt update && apt full-upgrade
|
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# apt-get autoremove && apt-get autoclean
|
||||
# dpkg -C
|
||||
# reboot
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
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@ -422,14 +421,14 @@
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<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
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<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
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|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
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|
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</ol>
|
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</section>
|
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|
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|
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@ -10,7 +10,7 @@
|
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<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
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|
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@ -96,6 +96,38 @@
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<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-12/">December, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-12-01T11:22:30+02:00">Sun Dec 01, 2019</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-12-01">2019-12-01</h2>
|
||||
<ul>
|
||||
<li>Upgrade CGSpace (linode18) to Ubuntu 18.04:
|
||||
<ul>
|
||||
<li>Check any packages that have residual configs and purge them:</li>
|
||||
<li><!-- raw HTML omitted --># dpkg -l | grep -E ‘^rc’ | awk ‘{print $2}’ | xargs dpkg -P<!-- raw HTML omitted --></li>
|
||||
<li>Make sure all packages are up to date and the package manager is up to date, then reboot:</li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code># apt update && apt full-upgrade
|
||||
# apt-get autoremove && apt-get autoclean
|
||||
# dpkg -C
|
||||
# reboot
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-12/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-11/">November, 2019</a></h2>
|
||||
@ -388,51 +420,6 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30+02:00">Fri Feb 01, 2019</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
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</p>
|
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</header>
|
||||
<h2 id="2019-02-01">2019-02-01</h2>
|
||||
<ul>
|
||||
<li>Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!</li>
|
||||
<li>The top IPs before, during, and after this latest alert tonight were:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E "01/Feb/2019:(17|18|19|20|21)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
|
||||
245 207.46.13.5
|
||||
332 54.70.40.11
|
||||
385 5.143.231.38
|
||||
405 207.46.13.173
|
||||
405 207.46.13.75
|
||||
1117 66.249.66.219
|
||||
1121 35.237.175.180
|
||||
1546 5.9.6.51
|
||||
2474 45.5.186.2
|
||||
5490 85.25.237.71
|
||||
</code></pre><ul>
|
||||
<li><code>85.25.237.71</code> is the “Linguee Bot” that I first saw last month</li>
|
||||
<li>The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase</li>
|
||||
<li>There were just over 3 million accesses in the nginx logs last month:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code># time zcat --force /var/log/nginx/* | grep -cE "[0-9]{1,2}/Jan/2019"
|
||||
3018243
|
||||
|
||||
real 0m19.873s
|
||||
user 0m22.203s
|
||||
sys 0m1.979s
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-02/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a>
|
||||
@ -459,14 +446,14 @@ sys 0m1.979s
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
||||
|
||||
|
||||
|
||||
@ -96,6 +96,51 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30+02:00">Fri Feb 01, 2019</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2019-02-01">2019-02-01</h2>
|
||||
<ul>
|
||||
<li>Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!</li>
|
||||
<li>The top IPs before, during, and after this latest alert tonight were:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E "01/Feb/2019:(17|18|19|20|21)" | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
|
||||
245 207.46.13.5
|
||||
332 54.70.40.11
|
||||
385 5.143.231.38
|
||||
405 207.46.13.173
|
||||
405 207.46.13.75
|
||||
1117 66.249.66.219
|
||||
1121 35.237.175.180
|
||||
1546 5.9.6.51
|
||||
2474 45.5.186.2
|
||||
5490 85.25.237.71
|
||||
</code></pre><ul>
|
||||
<li><code>85.25.237.71</code> is the “Linguee Bot” that I first saw last month</li>
|
||||
<li>The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase</li>
|
||||
<li>There were just over 3 million accesses in the nginx logs last month:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code># time zcat --force /var/log/nginx/* | grep -cE "[0-9]{1,2}/Jan/2019"
|
||||
3018243
|
||||
|
||||
real 0m19.873s
|
||||
user 0m22.203s
|
||||
sys 0m1.979s
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2019-02/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
|
||||
@ -354,28 +399,6 @@ sys 2m7.289s
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54+02:00">Sun Apr 01, 2018</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2018-04-01">2018-04-01</h2>
|
||||
<ul>
|
||||
<li>I tried to test something on DSpace Test but noticed that it’s down since god knows when</li>
|
||||
<li>Catalina logs at least show some memory errors yesterday:</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2018-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/4/" rel="prev" role="button">Previous page</a>
|
||||
@ -402,14 +425,14 @@ sys 2m7.289s
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
||||
|
||||
|
||||
|
||||
@ -96,6 +96,28 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54+02:00">Sun Apr 01, 2018</time> by Alan Orth in
|
||||
<span class="fas fa-folder" aria-hidden="true"></span> <a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
|
||||
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2018-04-01">2018-04-01</h2>
|
||||
<ul>
|
||||
<li>I tried to test something on DSpace Test but noticed that it’s down since god knows when</li>
|
||||
<li>Catalina logs at least show some memory errors yesterday:</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2018-04/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
|
||||
@ -391,33 +413,6 @@ COPY 54701
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2017-07-01T18:03:52+03:00">Sat Jul 01, 2017</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2017-07-01">2017-07-01</h2>
|
||||
<ul>
|
||||
<li>Run system updates and reboot DSpace Test</li>
|
||||
</ul>
|
||||
<h2 id="2017-07-04">2017-07-04</h2>
|
||||
<ul>
|
||||
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
|
||||
<li>Looking at extracting the metadata registries from ICARDA’s MEL DSpace database so we can compare fields with CGSpace</li>
|
||||
<li>We can use PostgreSQL’s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/5/" rel="prev" role="button">Previous page</a>
|
||||
@ -444,14 +439,14 @@ COPY 54701
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
||||
|
||||
|
||||
|
||||
@ -96,6 +96,33 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2017-07-01T18:03:52+03:00">Sat Jul 01, 2017</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2017-07-01">2017-07-01</h2>
|
||||
<ul>
|
||||
<li>Run system updates and reboot DSpace Test</li>
|
||||
</ul>
|
||||
<h2 id="2017-07-04">2017-07-04</h2>
|
||||
<ul>
|
||||
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
|
||||
<li>Looking at extracting the metadata registries from ICARDA’s MEL DSpace database so we can compare fields with CGSpace</li>
|
||||
<li>We can use PostgreSQL’s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
|
||||
</ul>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
|
||||
@ -337,32 +364,6 @@ DELETE 1
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-09-01T15:53:00+03:00">Thu Sep 01, 2016</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-09-01">2016-09-01</h2>
|
||||
<ul>
|
||||
<li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
|
||||
<li>Discuss how the migration of CGIAR’s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
|
||||
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
|
||||
<li>It looks like we might be able to use OUs now, instead of DCs:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=org" -D "admigration1@cgiarad.org" -W "(sAMAccountName=admigration1)"
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/6/" rel="prev" role="button">Previous page</a>
|
||||
@ -389,14 +390,14 @@ DELETE 1
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-29T21:26:07+03:00" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
||||
|
||||
|
||||
|
||||
@ -96,6 +96,32 @@
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2016-09-01T15:53:00+03:00">Thu Sep 01, 2016</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2016-09-01">2016-09-01</h2>
|
||||
<ul>
|
||||
<li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
|
||||
<li>Discuss how the migration of CGIAR’s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
|
||||
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
|
||||
<li>It looks like we might be able to use OUs now, instead of DCs:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b "dc=cgiarad,dc=org" -D "admigration1@cgiarad.org" -W "(sAMAccountName=admigration1)"
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
|
||||
@ -334,37 +360,11 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2015-11-23T17:00:57+03:00">Mon Nov 23, 2015</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2015-11-22">2015-11-22</h2>
|
||||
<ul>
|
||||
<li>CGSpace went down</li>
|
||||
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
|
||||
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
78
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/7/" rel="prev" role="button">Previous page</a>
|
||||
<a class="btn btn-outline-primary disabled" href="#" role="button" aria-disabled="true">Next page</a>
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/9/" rel="next" role="button">Next page</a>
|
||||
|
||||
|
||||
|
||||
</nav>
|
||||
@ -386,14 +386,14 @@ dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-11/">November, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
199
docs/posts/page/9/index.html
Normal file
199
docs/posts/page/9/index.html
Normal file
@ -0,0 +1,199 @@
|
||||
<!DOCTYPE html>
|
||||
<html lang="en" >
|
||||
|
||||
<head>
|
||||
<meta charset="utf-8">
|
||||
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
|
||||
|
||||
|
||||
<meta property="og:title" content="Posts" />
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2022-03-31T16:09:14+03:00" />
|
||||
|
||||
|
||||
|
||||
<meta name="twitter:card" content="summary"/>
|
||||
<meta name="twitter:title" content="Posts"/>
|
||||
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
|
||||
<meta name="generator" content="Hugo 0.96.0" />
|
||||
|
||||
|
||||
|
||||
<script type="application/ld+json">
|
||||
{
|
||||
"@context": "http://schema.org",
|
||||
"@type": "Blog",
|
||||
"headline": "CGSpace Notes",
|
||||
"url" : "https://alanorth.github.io/cgspace-notes/posts/",
|
||||
"author": {
|
||||
"@type": "Person",
|
||||
"name": "Alan Orth"
|
||||
},
|
||||
"dateModified": "2022-03-01T16:46:54+03:00",
|
||||
"keywords": "notes, migration, notes",
|
||||
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
|
||||
}
|
||||
</script>
|
||||
|
||||
|
||||
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/posts/">
|
||||
|
||||
<title>CGSpace Notes</title>
|
||||
|
||||
|
||||
<!-- combined, minified CSS -->
|
||||
|
||||
<link href="https://alanorth.github.io/cgspace-notes/css/style.beb8012edc08ba10be012f079d618dc243812267efe62e11f22fe49618f976a4.css" rel="stylesheet" integrity="sha256-vrgBLtwIuhC+AS8HnWGNwkOBImfv5i4R8i/klhj5dqQ=" crossorigin="anonymous">
|
||||
|
||||
|
||||
<!-- minified Font Awesome for SVG icons -->
|
||||
|
||||
<script defer src="https://alanorth.github.io/cgspace-notes/js/fontawesome.min.f5072c55a0721857184db93a50561d7dc13975b4de2e19db7f81eb5f3fa57270.js" integrity="sha256-9QcsVaByGFcYTbk6UFYdfcE5dbTeLhnbf4HrXz+lcnA=" crossorigin="anonymous"></script>
|
||||
|
||||
<!-- RSS 2.0 feed -->
|
||||
<link rel="alternate" type="application/rss+xml" href="https://alanorth.github.io/cgspace-notes/posts/index.xml" title="CGSpace Notes" />
|
||||
|
||||
|
||||
|
||||
|
||||
</head>
|
||||
|
||||
<body>
|
||||
|
||||
|
||||
<div class="blog-masthead">
|
||||
<div class="container">
|
||||
<nav class="nav blog-nav">
|
||||
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
|
||||
<header class="blog-header">
|
||||
<div class="container">
|
||||
<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
|
||||
<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
|
||||
</div>
|
||||
</header>
|
||||
|
||||
|
||||
|
||||
|
||||
<div class="container">
|
||||
<div class="row">
|
||||
<div class="col-sm-8 blog-main">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<article class="blog-post">
|
||||
<header>
|
||||
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
|
||||
<p class="blog-post-meta"><time datetime="2015-11-23T17:00:57+03:00">Mon Nov 23, 2015</time> by Alan Orth in
|
||||
|
||||
<span class="fas fa-tag" aria-hidden="true"></span> <a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
|
||||
|
||||
</p>
|
||||
</header>
|
||||
<h2 id="2015-11-22">2015-11-22</h2>
|
||||
<ul>
|
||||
<li>CGSpace went down</li>
|
||||
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
|
||||
<li>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</li>
|
||||
</ul>
|
||||
<pre tabindex="0"><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
|
||||
78
|
||||
</code></pre>
|
||||
<a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
|
||||
</article>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<nav class="blog-pagination">
|
||||
|
||||
|
||||
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/8/" rel="prev" role="button">Previous page</a>
|
||||
<a class="btn btn-outline-primary disabled" href="#" role="button" aria-disabled="true">Next page</a>
|
||||
|
||||
|
||||
</nav>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</div> <!-- /.blog-main -->
|
||||
|
||||
<aside class="col-sm-3 ml-auto blog-sidebar">
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Recent Posts</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">March, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-03/">April, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-02/">February, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2022-01/">January, 2022</a></li>
|
||||
|
||||
<li><a href="/cgspace-notes/2021-12/">December, 2021</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
|
||||
|
||||
|
||||
<section class="sidebar-module">
|
||||
<h4>Links</h4>
|
||||
<ol class="list-unstyled">
|
||||
|
||||
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
|
||||
|
||||
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
|
||||
|
||||
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
|
||||
|
||||
</ol>
|
||||
</section>
|
||||
|
||||
</aside>
|
||||
|
||||
|
||||
</div> <!-- /.row -->
|
||||
</div> <!-- /.container -->
|
||||
|
||||
|
||||
|
||||
<footer class="blog-footer">
|
||||
<p dir="auto">
|
||||
|
||||
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
|
||||
|
||||
</p>
|
||||
<p>
|
||||
<a href="#">Back to top</a>
|
||||
</p>
|
||||
</footer>
|
||||
|
||||
|
||||
</body>
|
||||
|
||||
</html>
|
||||
Reference in New Issue
Block a user