From 51ba5f4ac88bc9160e30957bf433e2c39eaa33c3 Mon Sep 17 00:00:00 2001
From: Alan Orth <alan.orth@gmail.com>
Date: Mon, 22 Jun 2020 15:55:59 +0300
Subject: [PATCH] Add notes

---
 content/posts/2020-06.md                | 15 +++++++++++++
 docs/2020-06/index.html                 | 30 ++++++++++++++++++++++---
 docs/categories/index.html              |  2 +-
 docs/categories/notes/index.html        |  2 +-
 docs/categories/notes/page/2/index.html |  2 +-
 docs/categories/notes/page/3/index.html |  2 +-
 docs/categories/notes/page/4/index.html |  2 +-
 docs/categories/page/2/index.html       |  2 +-
 docs/categories/page/3/index.html       |  2 +-
 docs/categories/page/4/index.html       |  2 +-
 docs/categories/page/5/index.html       |  2 +-
 docs/categories/page/6/index.html       |  2 +-
 docs/index.html                         |  2 +-
 docs/page/2/index.html                  |  2 +-
 docs/page/3/index.html                  |  2 +-
 docs/page/4/index.html                  |  2 +-
 docs/page/5/index.html                  |  2 +-
 docs/page/6/index.html                  |  2 +-
 docs/posts/index.html                   |  2 +-
 docs/posts/page/2/index.html            |  2 +-
 docs/posts/page/3/index.html            |  2 +-
 docs/posts/page/4/index.html            |  2 +-
 docs/posts/page/5/index.html            |  2 +-
 docs/posts/page/6/index.html            |  2 +-
 docs/sitemap.xml                        | 10 ++++-----
 25 files changed, 69 insertions(+), 30 deletions(-)

diff --git a/content/posts/2020-06.md b/content/posts/2020-06.md
index 1c112e16e..3eafc1897 100644
--- a/content/posts/2020-06.md
+++ b/content/posts/2020-06.md
@@ -396,4 +396,19 @@ COPY 3917
   - The same issue happens on my local environment and on the DSpace Test server
   - I raised the issue with Atmire
 
+## 2020-06-21
+
+- The PostgreSQL connections and locks still look OK on both CGSpace (linode18) and DSpace Test (linode26) after ten days or so
+  - I decided to upgrade the JDBC driver on DSpace Test from 42.2.9 to 42.2.14 to leave it for a few weeks and see if the issue comes back, as it was present on the test server with DSpace 6 as well
+  - As far as I can tell the issue is related to something in Tomcat > 7.0.99
+- Run system updates and reboot DSpace Test
+- Re-deploy `5_x-prod` branch on CGSpace, run system updates, and reboot the server
+  - I had to restart Tomcat 7 once after the server came back up because some of the Solr statistics cores didn't come up the first time
+  - Unfortunately I realized that I had forgotten to update the `5_x-prod` branch to include the REST API fix from last week so I had to rebuild and restart Tomcat again
+
+## 2020-06-22
+
+- Skype with Peter, Abenet, Enrico, Jane, and Moayad about the latest OpenRXV developments
+  - I will go visit CodeObia later this week to run through the list of issues and close the ones that are finished
+
 <!-- vim: set sw=2 ts=2: -->
diff --git a/docs/2020-06/index.html b/docs/2020-06/index.html
index 0db9ccd03..9d4a1b6fd 100644
--- a/docs/2020-06/index.html
+++ b/docs/2020-06/index.html
@@ -19,7 +19,7 @@ I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Tes
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-06/" />
 <meta property="article:published_time" content="2020-06-01T13:55:39+03:00" />
-<meta property="article:modified_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="article:modified_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="June, 2020"/>
@@ -43,9 +43,9 @@ I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Tes
   "@type": "BlogPosting",
   "headline": "June, 2020",
   "url": "https://alanorth.github.io/cgspace-notes/2020-06/",
-  "wordCount": "2889",
+  "wordCount": "3079",
   "datePublished": "2020-06-01T13:55:39+03:00",
-  "dateModified": "2020-06-14T16:06:56+03:00",
+  "dateModified": "2020-06-18T20:11:24+03:00",
   "author": {
     "@type": "Person",
     "name": "Alan Orth"
@@ -539,6 +539,30 @@ COPY 3917
 </ul>
 </li>
 </ul>
+<h2 id="2020-06-21">2020-06-21</h2>
+<ul>
+<li>The PostgreSQL connections and locks still look OK on both CGSpace (linode18) and DSpace Test (linode26) after ten days or so
+<ul>
+<li>I decided to upgrade the JDBC driver on DSpace Test from 42.2.9 to 42.2.14 to leave it for a few weeks and see if the issue comes back, as it was present on the test server with DSpace 6 as well</li>
+<li>As far as I can tell the issue is related to something in Tomcat &gt; 7.0.99</li>
+</ul>
+</li>
+<li>Run system updates and reboot DSpace Test</li>
+<li>Re-deploy <code>5_x-prod</code> branch on CGSpace, run system updates, and reboot the server
+<ul>
+<li>I had to restart Tomcat 7 once after the server came back up because some of the Solr statistics cores didn&rsquo;t come up the first time</li>
+<li>Unfortunately I realized that I had forgotten to update the <code>5_x-prod</code> branch to include the REST API fix from last week so I had to rebuild and restart Tomcat again</li>
+</ul>
+</li>
+</ul>
+<h2 id="2020-06-22">2020-06-22</h2>
+<ul>
+<li>Skype with Peter, Abenet, Enrico, Jane, and Moayad about the latest OpenRXV developments
+<ul>
+<li>I will go visit CodeObia later this week to run through the list of issues and close the ones that are finished</li>
+</ul>
+</li>
+</ul>
 <!-- raw HTML omitted -->
 
   
diff --git a/docs/categories/index.html b/docs/categories/index.html
index 5b0ade9f7..eac8b456a 100644
--- a/docs/categories/index.html
+++ b/docs/categories/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/categories/notes/index.html b/docs/categories/notes/index.html
index 3495303bd..5256f3aa5 100644
--- a/docs/categories/notes/index.html
+++ b/docs/categories/notes/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
diff --git a/docs/categories/notes/page/2/index.html b/docs/categories/notes/page/2/index.html
index 9e4596891..823c37991 100644
--- a/docs/categories/notes/page/2/index.html
+++ b/docs/categories/notes/page/2/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
diff --git a/docs/categories/notes/page/3/index.html b/docs/categories/notes/page/3/index.html
index 64d216bde..f0247cbad 100644
--- a/docs/categories/notes/page/3/index.html
+++ b/docs/categories/notes/page/3/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
diff --git a/docs/categories/notes/page/4/index.html b/docs/categories/notes/page/4/index.html
index c9da9164f..aa7a564e6 100644
--- a/docs/categories/notes/page/4/index.html
+++ b/docs/categories/notes/page/4/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
diff --git a/docs/categories/page/2/index.html b/docs/categories/page/2/index.html
index 4a90cec8f..6bd606560 100644
--- a/docs/categories/page/2/index.html
+++ b/docs/categories/page/2/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/categories/page/3/index.html b/docs/categories/page/3/index.html
index 01c4d0579..445d78e03 100644
--- a/docs/categories/page/3/index.html
+++ b/docs/categories/page/3/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/categories/page/4/index.html b/docs/categories/page/4/index.html
index 1af216b27..514eeae0c 100644
--- a/docs/categories/page/4/index.html
+++ b/docs/categories/page/4/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/categories/page/5/index.html b/docs/categories/page/5/index.html
index 134ed3980..c2a0afa37 100644
--- a/docs/categories/page/5/index.html
+++ b/docs/categories/page/5/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/categories/page/6/index.html b/docs/categories/page/6/index.html
index 472400504..2742fb874 100644
--- a/docs/categories/page/6/index.html
+++ b/docs/categories/page/6/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
diff --git a/docs/index.html b/docs/index.html
index f8366f840..f7189e1ea 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/page/2/index.html b/docs/page/2/index.html
index 9ad7e99cc..a1b8ca8a7 100644
--- a/docs/page/2/index.html
+++ b/docs/page/2/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/page/3/index.html b/docs/page/3/index.html
index e47372bfb..cc02d5291 100644
--- a/docs/page/3/index.html
+++ b/docs/page/3/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/page/4/index.html b/docs/page/4/index.html
index 551c60a01..d326c76e5 100644
--- a/docs/page/4/index.html
+++ b/docs/page/4/index.html
@@ -9,7 +9,7 @@
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 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/page/5/index.html b/docs/page/5/index.html
index ae03bcf59..faa377219 100644
--- a/docs/page/5/index.html
+++ b/docs/page/5/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/page/6/index.html b/docs/page/6/index.html
index f69ec8920..7b5d153fa 100644
--- a/docs/page/6/index.html
+++ b/docs/page/6/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
diff --git a/docs/posts/index.html b/docs/posts/index.html
index db8929a1a..87130b89e 100644
--- a/docs/posts/index.html
+++ b/docs/posts/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
diff --git a/docs/posts/page/2/index.html b/docs/posts/page/2/index.html
index d6d292f63..d135cae09 100644
--- a/docs/posts/page/2/index.html
+++ b/docs/posts/page/2/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
diff --git a/docs/posts/page/3/index.html b/docs/posts/page/3/index.html
index 93eb18a1f..cc2c893cd 100644
--- a/docs/posts/page/3/index.html
+++ b/docs/posts/page/3/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
diff --git a/docs/posts/page/4/index.html b/docs/posts/page/4/index.html
index 51ab3ed27..457d38736 100644
--- a/docs/posts/page/4/index.html
+++ b/docs/posts/page/4/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
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diff --git a/docs/posts/page/5/index.html b/docs/posts/page/5/index.html
index 01bd1a4e2..6d3e3e23c 100644
--- a/docs/posts/page/5/index.html
+++ b/docs/posts/page/5/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
diff --git a/docs/posts/page/6/index.html b/docs/posts/page/6/index.html
index 3d582c3f8..8430eaf2e 100644
--- a/docs/posts/page/6/index.html
+++ b/docs/posts/page/6/index.html
@@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-14T16:06:56+03:00" />
+<meta property="og:updated_time" content="2020-06-18T20:11:24+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
diff --git a/docs/sitemap.xml b/docs/sitemap.xml
index 6191c9d72..6e1cd8f03 100644
--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@@ -4,27 +4,27 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
-    <lastmod>2020-06-14T16:06:56+03:00</lastmod>
+    <lastmod>2020-06-18T20:11:24+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2020-06-14T16:06:56+03:00</lastmod>
+    <lastmod>2020-06-18T20:11:24+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/2020-06/</loc>
-    <lastmod>2020-06-14T16:06:56+03:00</lastmod>
+    <lastmod>2020-06-18T20:11:24+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
-    <lastmod>2020-06-14T16:06:56+03:00</lastmod>
+    <lastmod>2020-06-18T20:11:24+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
-    <lastmod>2020-06-14T16:06:56+03:00</lastmod>
+    <lastmod>2020-06-18T20:11:24+03:00</lastmod>
   </url>
   
   <url>