Update notes for 2018-11-08

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 <meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
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 <li>Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage</li>
 <li>Today these are the top 10 IPs:</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
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 <li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
 <li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
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 <li>Also, I&rsquo;ll re-run the <code>postgresql</code> tasks because the custom PostgreSQL variables are dynamic according to the system&rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month</li>
 <li>I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&rsquo;m getting those autowire errors in Tomcat 8.5.30 again:</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-09/'>Read more →</a>
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 <li>The server only has 8GB of RAM so we&rsquo;ll eventually need to upgrade to a larger one because we&rsquo;ll start starving the OS, PostgreSQL, and command line batch processes</li>
 <li>I ran all system updates on DSpace Test and rebooted it</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-08/'>Read more →</a>
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 <pre><code>There is insufficient memory for the Java Runtime Environment to continue.
 </code></pre>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-07/'>Read more →</a>
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 user    8m5.056s
 sys     2m7.289s
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   <a href='https://alanorth.github.io/cgspace-notes/2018-06/'>Read more →</a>
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 <li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
 <li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a>
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 <li>I tried to test something on DSpace Test but noticed that it&rsquo;s down since god knows when</li>
 <li>Catalina logs at least show some memory errors yesterday:</li>
 </ul>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-04/'>Read more →</a>
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 <ul>
 <li>Export a CSV of the IITA community metadata for Martin Mueller</li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
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 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
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   <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
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