Add notes for 2020-07-01

2024-11-22 14:45:03 +01:00 · 2020-07-01 15:37:20 +03:00 · 2020-07-01 15:37:20 +03:00 · 4589aa016e
commit 4589aa016e
parent 584486bdc6
89 changed files with 1212 additions and 511 deletions
--- a/content/posts/2020-07.md
+++ b/content/posts/2020-07.md
@ -0,0 +1,186 @@
 ---
 title: "July, 2020"
 date: 2020-07-01T10:53:54+03:00
 author: "Alan Orth"
 categories: ["Notes"]
 ---
 ## 2020-07-01
 - A few users noticed that CGSpace wasn't loading items today, item pages seem blank
  - I looked at the PostgreSQL locks but they don't seem unusual
  - I guess this is the same "blank item page" issue that we had a few times in 2019 that we never solved
  - I restarted Tomcat and PostgreSQL and the issue was gone
 - Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the `5_x-prod` branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter's request
 <!--more-->
 - Also, Linode is alerting that we had high outbound traffic rate early this morning around midnight AND high CPU load later in the morning
 - First looking at the traffic in the morning:
 ```
 # cat /var/log/nginx/*.log.1 /var/log/nginx/*.log | grep -E "01/Jul/2020:(00|01|02|03|04)" | goaccess --log-format=COMBINED -
 ...
 9659 33.56%    1  0.08% 340.94 MiB 64.39.99.13
 3317 11.53%    1  0.08% 871.71 MiB 199.47.87.140
 2986 10.38%    1  0.08%  17.39 MiB 199.47.87.144
 2286  7.94%    1  0.08%  13.04 MiB 199.47.87.142
 ```
 - 64.39.99.13 belongs to Qualys, but I see they are using a normal desktop user agent:
 ```
 Mozilla/5.0 (Macintosh; Intel Mac OS X 10_14_5) AppleWebKit/605.1.15 (KHTML, like Gecko) Version/12.1.1 Safari/605.1.15
 ```
 - I will purge hits from that IP from Solr
 - The 199.47.87.x IPs belong to Turnitin, and apparently they are NOT marked as bots and we have 40,000 hits from them in 2020 statistics alone:
 ```
 $ curl -s "http://localhost:8081/solr/statistics/select" -d "q=userAgent:/Turnitin.*/&rows=0" | grep -oE 'numFound="[0-9]+"'
 numFound="41694"
 ```
 - They used to be "TurnitinBot"... hhmmmm, seems they use both: https://turnitin.com/robot/crawlerinfo.html
 - I will add Turnitin to the DSpace bot user agent list, but I see they are reqesting `robots.txt` and only requesting item pages, so that's impressive! I don't need to add them to the "bad bot" rate limit list in nginx
 - While looking at the logs I noticed eighty-one IPs in the range 185.152.250.x making little requests this user agent:
 ```
 Mozilla/5.0 (Macintosh; Intel Mac OS X 10.14; rv:76.0) Gecko/20100101 Firefox/76.0
 ```
 - The IPs all belong to HostRoyale:
 ```
 # cat /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep '01/Jul/2020' | awk '{print $1}' | grep 185.152.250. | sort | uniq | wc -l
 81
 # cat /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep '01/Jul/2020' | awk '{print $1}' | grep 185.152.250. | sort | uniq | sort -h
 185.152.250.1
 185.152.250.101
 185.152.250.103
 185.152.250.105
 185.152.250.107
 185.152.250.111
 185.152.250.115
 185.152.250.119
 185.152.250.121
 185.152.250.123
 185.152.250.125
 185.152.250.129
 185.152.250.13
 185.152.250.131
 185.152.250.133
 185.152.250.135
 185.152.250.137
 185.152.250.141
 185.152.250.145
 185.152.250.149
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 185.152.250.189
 185.152.250.191
 185.152.250.197
 185.152.250.201
 185.152.250.205
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 185.152.250.21
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 185.152.250.233
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 185.152.250.255
 185.152.250.27
 185.152.250.29
 185.152.250.3
 185.152.250.31
 185.152.250.39
 185.152.250.41
 185.152.250.47
 185.152.250.5
 185.152.250.59
 185.152.250.63
 185.152.250.65
 185.152.250.67
 185.152.250.7
 185.152.250.71
 185.152.250.73
 185.152.250.77
 185.152.250.81
 185.152.250.85
 185.152.250.89
 185.152.250.9
 185.152.250.93
 185.152.250.95
 185.152.250.97
 185.152.250.99
 ```
 - It's only a few hundred requests each, but I am very suspicious so I will record it here and purge their IPs from Solr
 - Then I see 185.187.30.14 and 185.187.30.13 making requests also, with several different "normal" user agents
  - They are both apparently in France, belonging to Scalair FR hosting
  - I will purge their requests from Solr too
 - Now I see some other new bots I hadn't noticed before:
  - `Mozilla/5.0 (compatible; MSIE 10.0; Windows NT 6.1; Trident/6.0) LinkCheck by Siteimprove.com`
  - `Consilio (WebHare Platform 4.28.2-dev); LinkChecker)`, which appears to be a [university CMS](https://www.utwente.nl/en/websites/webhare/)
  - I will add `LinkCheck`, `Consilio`, and `WebHare` to the list of DSpace bot agents and purge them from Solr stats
  - COUNTER-Robots list already has `link.?check` but for some reason DSpace didn't match that and I see hits for some of these...
  - Maybe I should add `[Ll]ink.?[Cc]heck.?` to a custom list for now?
  - For now I added `Turnitin` to the [new bots pull request on COUNTER-Robots](https://github.com/atmire/COUNTER-Robots/pull/34)
 - I purged 20,000 hits from IPs and 45,000 hits from user agents
 - I will revert the default "example" agents file back to the upstream master branch of COUNTER-Robots, and then add all my custom ones that are pending in pull requests they haven't merged yet:
 ```
 $ diff --unchanged-line-format= --old-line-format= --new-line-format='%L' dspace/config/spiders/agents/example ~/src/git/COUNTER-Robots/COUNTER_Robots_list.txt
 Citoid
 ecointernet
 GigablastOpenSource
 Jersey\/\d
 MarcEdit
 OgScrper
 okhttp
 ^Pattern\/\d
 ReactorNetty\/\d
 sqlmap
 Typhoeus
 7siters
 ```
 - Just a note that I *still* can't deploy the `6_x-dev-atmire-modules` branch as it fails at ant update:
 ```
     [java] java.lang.RuntimeException: Failed to startup the DSpace Service Manager: failure starting up spring service manager: Error crea
 ting bean with name 'DefaultStorageUpdateConfig': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Could not autowire method: public void com.atmire.statistics.util.StorageReportsUpdater.setStorageReportServi
 ces(java.util.List); nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'cuaEPersonStorageReportService': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationExceptio
 n: Could not autowire field: private com.atmire.dspace.cua.dao.storage.CUAEPersonStorageReportDAO com.atmire.dspace.cua.CUAStorageReportServ
 iceImpl$CUAEPersonStorageReportServiceImpl.CUAEPersonStorageReportDAO; nested exception is org.springframework.beans.factory.NoUniqueBeanDef
 initionException: No qualifying bean of type [com.atmire.dspace.cua.dao.storage.CUAEPersonStorageReportDAO] is defined: expected single matc
 hing bean but found 2: com.atmire.dspace.cua.dao.impl.CUAStorageReportDAOImpl$CUAEPersonStorageReportDAOImpl#0,com.atmire.dspace.cua.dao.imp
 l.CUAStorageReportDAOImpl$CUAEPersonStorageReportDAOImpl#1
 ```
 - I had told Atmire about this several weeks ago... but I reminded them again in the ticket
 <!-- vim: set sw=2 ts=2: -->
--- a/docs/2015-11/index.html
+++ b/docs/2015-11/index.html
@ -239,6 +239,8 @@ db.statementpool = true
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -247,8 +249,6 @@ db.statementpool = true
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2015-12/index.html
+++ b/docs/2015-12/index.html
@ -261,6 +261,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -269,8 +271,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-01/index.html
+++ b/docs/2016-01/index.html
@ -197,6 +197,8 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sor
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -205,8 +207,6 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} ; | sor
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-02/index.html
+++ b/docs/2016-02/index.html
@ -375,6 +375,8 @@ Bitstream: tést señora alimentación.pdf
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -383,8 +385,6 @@ Bitstream: tést señora alimentación.pdf
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-03/index.html
+++ b/docs/2016-03/index.html
@ -313,6 +313,8 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -321,8 +323,6 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-04/index.html
+++ b/docs/2016-04/index.html
@ -492,6 +492,8 @@ dspace.log.2016-04-27:7271
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -500,8 +502,6 @@ dspace.log.2016-04-27:7271
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-05/index.html
+++ b/docs/2016-05/index.html
@ -368,6 +368,8 @@ sys     0m20.540s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -376,8 +378,6 @@ sys     0m20.540s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-06/index.html
+++ b/docs/2016-06/index.html
@ -406,6 +406,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -414,8 +416,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-07/index.html
+++ b/docs/2016-07/index.html
@ -322,6 +322,8 @@ discovery.index.authority.ignore-variants=true
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -330,8 +332,6 @@ discovery.index.authority.ignore-variants=true
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-08/index.html
+++ b/docs/2016-08/index.html
@ -386,6 +386,8 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -394,8 +396,6 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-09/index.html
+++ b/docs/2016-09/index.html
@ -603,6 +603,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -611,8 +613,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-10/index.html
+++ b/docs/2016-10/index.html
@ -369,6 +369,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -377,8 +379,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-11/index.html
+++ b/docs/2016-11/index.html
@ -545,6 +545,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -553,8 +555,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2016-12/index.html
+++ b/docs/2016-12/index.html
@ -781,6 +781,8 @@ $ exit
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -789,8 +791,6 @@ $ exit
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-01/index.html
+++ b/docs/2017-01/index.html
@ -366,6 +366,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -374,8 +376,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-02/index.html
+++ b/docs/2017-02/index.html
@ -421,6 +421,8 @@ COPY 1968
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -429,8 +431,6 @@ COPY 1968
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-03/index.html
+++ b/docs/2017-03/index.html
@ -352,6 +352,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -360,8 +362,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-04/index.html
+++ b/docs/2017-04/index.html
@ -582,6 +582,8 @@ $ gem install compass -v 1.0.3
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -590,8 +592,6 @@ $ gem install compass -v 1.0.3
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-05/index.html
+++ b/docs/2017-05/index.html
@ -388,6 +388,8 @@ UPDATE 187
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -396,8 +398,6 @@ UPDATE 187
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-06/index.html
+++ b/docs/2017-06/index.html
@ -267,6 +267,8 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -275,8 +277,6 @@ $ JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot; [dspace]/bin/dspace impo
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-07/index.html
+++ b/docs/2017-07/index.html
@ -272,6 +272,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -280,8 +282,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-08/index.html
+++ b/docs/2017-08/index.html
@ -514,6 +514,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -522,8 +524,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-09/index.html
+++ b/docs/2017-09/index.html
@ -656,6 +656,8 @@ Cert Status: good
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -664,8 +666,6 @@ Cert Status: good
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-10/index.html
+++ b/docs/2017-10/index.html
@ -440,6 +440,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -448,8 +450,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-11/index.html
+++ b/docs/2017-11/index.html
@ -941,6 +941,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -949,8 +951,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2017-12/index.html
+++ b/docs/2017-12/index.html
@ -780,6 +780,8 @@ DELETE 20
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -788,8 +790,6 @@ DELETE 20
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-01/index.html
+++ b/docs/2018-01/index.html
@ -1449,6 +1449,8 @@ Catalina:type=Manager,context=/,host=localhost  activeSessions  8
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1457,8 +1459,6 @@ Catalina:type=Manager,context=/,host=localhost  activeSessions  8
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-02/index.html
+++ b/docs/2018-02/index.html
@ -1036,6 +1036,8 @@ UPDATE 3
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1044,8 +1046,6 @@ UPDATE 3
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-03/index.html
+++ b/docs/2018-03/index.html
@ -582,6 +582,8 @@ Fixed 5 occurences of: GENEBANKS
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -590,8 +592,6 @@ Fixed 5 occurences of: GENEBANKS
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-04/index.html
+++ b/docs/2018-04/index.html
@ -591,6 +591,8 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -599,8 +601,6 @@ $ pg_restore -O -U dspacetest -d dspacetest -W -h localhost /tmp/dspace_2018-04-
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-05/index.html
+++ b/docs/2018-05/index.html
@ -520,6 +520,8 @@ $ psql -h localhost -U postgres dspacetest
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -528,8 +530,6 @@ $ psql -h localhost -U postgres dspacetest
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-06/index.html
+++ b/docs/2018-06/index.html
@ -514,6 +514,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -522,8 +524,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-07/index.html
+++ b/docs/2018-07/index.html
@ -566,6 +566,8 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -574,8 +576,6 @@ dspace=# select count(text_value) from metadatavalue where resource_type_id=2 an
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-08/index.html
+++ b/docs/2018-08/index.html
@ -439,6 +439,8 @@ $ dspace database migrate ignored
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -447,8 +449,6 @@ $ dspace database migrate ignored
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-09/index.html
+++ b/docs/2018-09/index.html
@ -745,6 +745,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -753,8 +755,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-10/index.html
+++ b/docs/2018-10/index.html
@ -653,6 +653,8 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -661,8 +663,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-11/index.html
+++ b/docs/2018-11/index.html
@ -550,6 +550,8 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -558,8 +560,6 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2018-12/index.html
+++ b/docs/2018-12/index.html
@ -591,6 +591,8 @@ UPDATE 1
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -599,8 +601,6 @@ UPDATE 1
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-01/index.html
+++ b/docs/2019-01/index.html
@ -1261,6 +1261,8 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1269,8 +1271,6 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-02/index.html
+++ b/docs/2019-02/index.html
@ -1341,6 +1341,8 @@ Please see the DSpace documentation for assistance.
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1349,8 +1351,6 @@ Please see the DSpace documentation for assistance.
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-03/index.html
+++ b/docs/2019-03/index.html
@ -1205,6 +1205,8 @@ sys     0m2.551s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1213,8 +1215,6 @@ sys     0m2.551s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-04/index.html
+++ b/docs/2019-04/index.html
@ -1296,6 +1296,8 @@ UPDATE 14
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1304,8 +1306,6 @@ UPDATE 14
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-05/index.html
+++ b/docs/2019-05/index.html
@ -628,6 +628,8 @@ COPY 64871
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -636,8 +638,6 @@ COPY 64871
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-06/index.html
+++ b/docs/2019-06/index.html
@ -314,6 +314,8 @@ UPDATE 2
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -322,8 +324,6 @@ UPDATE 2
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-07/index.html
+++ b/docs/2019-07/index.html
@ -551,6 +551,8 @@ issn.validate('1020-3362')
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -559,8 +561,6 @@ issn.validate('1020-3362')
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-08/index.html
+++ b/docs/2019-08/index.html
@ -570,6 +570,8 @@ sys     2m27.496s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -578,8 +580,6 @@ sys     2m27.496s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-09/index.html
+++ b/docs/2019-09/index.html
@ -578,6 +578,8 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -586,8 +588,6 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-10/index.html
+++ b/docs/2019-10/index.html
@ -382,6 +382,8 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -390,8 +392,6 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-11/index.html
+++ b/docs/2019-11/index.html
@ -689,6 +689,8 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -697,8 +699,6 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2019-12/index.html
+++ b/docs/2019-12/index.html
@ -401,6 +401,8 @@ UPDATE 1
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -409,8 +411,6 @@ UPDATE 1
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-01/index.html
+++ b/docs/2020-01/index.html
@ -601,6 +601,8 @@ COPY 2900
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -609,8 +611,6 @@ COPY 2900
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-02/index.html
+++ b/docs/2020-02/index.html
@ -1272,6 +1272,8 @@ Moving: 21993 into core statistics-2019
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -1280,8 +1282,6 @@ Moving: 21993 into core statistics-2019
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-03/index.html
+++ b/docs/2020-03/index.html
@ -481,6 +481,8 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -489,8 +491,6 @@ $ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-i
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-04/index.html
+++ b/docs/2020-04/index.html
@ -655,6 +655,8 @@ $ psql -c 'select * from pg_stat_activity' | wc -l
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -663,8 +665,6 @@ $ psql -c 'select * from pg_stat_activity' | wc -l
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-05/index.html
+++ b/docs/2020-05/index.html
@ -474,6 +474,8 @@ Caused by: java.lang.NullPointerException
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -482,8 +484,6 @@ Caused by: java.lang.NullPointerException
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-06/index.html
+++ b/docs/2020-06/index.html
@ -19,7 +19,7 @@ I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Tes
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-06/" />
 <meta property="article:published_time" content="2020-06-01T13:55:39+03:00" />
-<meta property="article:modified_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="article:modified_time" content="2020-06-30T19:21:50+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="June, 2020"/>
@ -45,7 +45,7 @@ I tried to build the OAI registry on the freshly migrated DSpace 6 on DSpace Tes
  "url": "https://alanorth.github.io/cgspace-notes/2020-06/",
  "wordCount": "4788",
  "datePublished": "2020-06-01T13:55:39+03:00",
-  "dateModified": "2020-06-30T15:47:18+03:00",
+  "dateModified": "2020-06-30T19:21:50+03:00",
  "author": {
    "@type": "Person",
    "name": "Alan Orth"
@ -808,6 +808,8 @@ $ csvcut -c 'id,cg.subject.ilri[],cg.subject.ilri[en_US],dc.subject[en_US]' /tmp
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -816,8 +818,6 @@ $ csvcut -c 'id,cg.subject.ilri[],cg.subject.ilri[en_US],dc.subject[en_US]' /tmp
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/2020-07/index.html
+++ b/docs/2020-07/index.html
@ -0,0 +1,368 @@
 <!DOCTYPE html>
 <html lang="en" >
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 A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 I looked at the PostgreSQL locks but they don&rsquo;t seem unusual
 I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved
 I restarted Tomcat and PostgreSQL and the issue was gone
 Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the 5_x-prod branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request
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 A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 I looked at the PostgreSQL locks but they don&rsquo;t seem unusual
 I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved
 I restarted Tomcat and PostgreSQL and the issue was gone
 Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the 5_x-prod branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request
 "/>
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        <p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-07/">July, 2020</a></h2>
    <p class="blog-post-meta"><time datetime="2020-07-01T10:53:54+03:00">Wed Jul 01, 2020</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2020-07-01">2020-07-01</h2>
 <ul>
 <li>A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 <ul>
 <li>I looked at the PostgreSQL locks but they don&rsquo;t seem unusual</li>
 <li>I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved</li>
 <li>I restarted Tomcat and PostgreSQL and the issue was gone</li>
 </ul>
 </li>
 <li>Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the <code>5_x-prod</code> branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request</li>
 </ul>
 <ul>
 <li>Also, Linode is alerting that we had high outbound traffic rate early this morning around midnight AND high CPU load later in the morning</li>
 <li>First looking at the traffic in the morning:</li>
 </ul>
 <pre><code># cat /var/log/nginx/*.log.1 /var/log/nginx/*.log | grep -E &quot;01/Jul/2020:(00|01|02|03|04)&quot; | goaccess --log-format=COMBINED -
 ...
 9659 33.56%    1  0.08% 340.94 MiB 64.39.99.13
 3317 11.53%    1  0.08% 871.71 MiB 199.47.87.140
 2986 10.38%    1  0.08%  17.39 MiB 199.47.87.144
 2286  7.94%    1  0.08%  13.04 MiB 199.47.87.142
 </code></pre><ul>
 <li>64.39.99.13 belongs to Qualys, but I see they are using a normal desktop user agent:</li>
 </ul>
 <pre><code>Mozilla/5.0 (Macintosh; Intel Mac OS X 10_14_5) AppleWebKit/605.1.15 (KHTML, like Gecko) Version/12.1.1 Safari/605.1.15
 </code></pre><ul>
 <li>I will purge hits from that IP from Solr</li>
 <li>The 199.47.87.x IPs belong to Turnitin, and apparently they are NOT marked as bots and we have 40,000 hits from them in 2020 statistics alone:</li>
 </ul>
 <pre><code>$ curl -s &quot;http://localhost:8081/solr/statistics/select&quot; -d &quot;q=userAgent:/Turnitin.*/&amp;rows=0&quot; | grep -oE 'numFound=&quot;[0-9]+&quot;'
 numFound=&quot;41694&quot;
 </code></pre><ul>
 <li>They used to be &ldquo;TurnitinBot&rdquo;&hellip; hhmmmm, seems they use both: <a href="https://turnitin.com/robot/crawlerinfo.html">https://turnitin.com/robot/crawlerinfo.html</a></li>
 <li>I will add Turnitin to the DSpace bot user agent list, but I see they are reqesting <code>robots.txt</code> and only requesting item pages, so that&rsquo;s impressive! I don&rsquo;t need to add them to the &ldquo;bad bot&rdquo; rate limit list in nginx</li>
 <li>While looking at the logs I noticed eighty-one IPs in the range 185.152.250.x making little requests this user agent:</li>
 </ul>
 <pre><code>Mozilla/5.0 (Macintosh; Intel Mac OS X 10.14; rv:76.0) Gecko/20100101 Firefox/76.0
 </code></pre><ul>
 <li>The IPs all belong to HostRoyale:</li>
 </ul>
 <pre><code># cat /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep '01/Jul/2020' | awk '{print $1}' | grep 185.152.250. | sort | uniq | wc -l
 81
 # cat /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep '01/Jul/2020' | awk '{print $1}' | grep 185.152.250. | sort | uniq | sort -h
 185.152.250.1
 185.152.250.101
 185.152.250.103
 185.152.250.105
 185.152.250.107
 185.152.250.111
 185.152.250.115
 185.152.250.119
 185.152.250.121
 185.152.250.123
 185.152.250.125
 185.152.250.129
 185.152.250.13
 185.152.250.131
 185.152.250.133
 185.152.250.135
 185.152.250.137
 185.152.250.141
 185.152.250.145
 185.152.250.149
 185.152.250.153
 185.152.250.155
 185.152.250.157
 185.152.250.159
 185.152.250.161
 185.152.250.163
 185.152.250.165
 185.152.250.167
 185.152.250.17
 185.152.250.171
 185.152.250.183
 185.152.250.189
 185.152.250.191
 185.152.250.197
 185.152.250.201
 185.152.250.205
 185.152.250.209
 185.152.250.21
 185.152.250.213
 185.152.250.217
 185.152.250.219
 185.152.250.221
 185.152.250.223
 185.152.250.225
 185.152.250.227
 185.152.250.229
 185.152.250.231
 185.152.250.233
 185.152.250.235
 185.152.250.239
 185.152.250.243
 185.152.250.247
 185.152.250.249
 185.152.250.25
 185.152.250.251
 185.152.250.253
 185.152.250.255
 185.152.250.27
 185.152.250.29
 185.152.250.3
 185.152.250.31
 185.152.250.39
 185.152.250.41
 185.152.250.47
 185.152.250.5
 185.152.250.59
 185.152.250.63
 185.152.250.65
 185.152.250.67
 185.152.250.7
 185.152.250.71
 185.152.250.73
 185.152.250.77
 185.152.250.81
 185.152.250.85
 185.152.250.89
 185.152.250.9
 185.152.250.93
 185.152.250.95
 185.152.250.97
 185.152.250.99
 </code></pre><ul>
 <li>It&rsquo;s only a few hundred requests each, but I am very suspicious so I will record it here and purge their IPs from Solr</li>
 <li>Then I see 185.187.30.14 and 185.187.30.13 making requests also, with several different &ldquo;normal&rdquo; user agents
 <ul>
 <li>They are both apparently in France, belonging to Scalair FR hosting</li>
 <li>I will purge their requests from Solr too</li>
 </ul>
 </li>
 <li>Now I see some other new bots I hadn&rsquo;t noticed before:
 <ul>
 <li><code>Mozilla/5.0 (compatible; MSIE 10.0; Windows NT 6.1; Trident/6.0) LinkCheck by Siteimprove.com</code></li>
 <li><code>Consilio (WebHare Platform 4.28.2-dev); LinkChecker)</code>, which appears to be a <a href="https://www.utwente.nl/en/websites/webhare/">university CMS</a></li>
 <li>I will add <code>LinkCheck</code>, <code>Consilio</code>, and <code>WebHare</code> to the list of DSpace bot agents and purge them from Solr stats</li>
 <li>COUNTER-Robots list already has <code>link.?check</code> but for some reason DSpace didn&rsquo;t match that and I see hits for some of these&hellip;</li>
 <li>Maybe I should add <code>[Ll]ink.?[Cc]heck.?</code> to a custom list for now?</li>
 <li>For now I added <code>Turnitin</code> to the <a href="https://github.com/atmire/COUNTER-Robots/pull/34">new bots pull request on COUNTER-Robots</a></li>
 </ul>
 </li>
 <li>I purged 20,000 hits from IPs and 45,000 hits from user agents</li>
 <li>I will revert the default &ldquo;example&rdquo; agents file back to the upstream master branch of COUNTER-Robots, and then add all my custom ones that are pending in pull requests they haven&rsquo;t merged yet:</li>
 </ul>
 <pre><code>$ diff --unchanged-line-format= --old-line-format= --new-line-format='%L' dspace/config/spiders/agents/example ~/src/git/COUNTER-Robots/COUNTER_Robots_list.txt
 Citoid
 ecointernet
 GigablastOpenSource
 Jersey\/\d
 MarcEdit
 OgScrper
 okhttp
 ^Pattern\/\d
 ReactorNetty\/\d
 sqlmap
 Typhoeus
 7siters
 </code></pre><ul>
 <li>Just a note that I <em>still</em> can&rsquo;t deploy the <code>6_x-dev-atmire-modules</code> branch as it fails at ant update:</li>
 </ul>
 <pre><code>     [java] java.lang.RuntimeException: Failed to startup the DSpace Service Manager: failure starting up spring service manager: Error crea
 ting bean with name 'DefaultStorageUpdateConfig': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Could not autowire method: public void com.atmire.statistics.util.StorageReportsUpdater.setStorageReportServi
 ces(java.util.List); nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'cuaEPersonStorageReportService': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationExceptio
 n: Could not autowire field: private com.atmire.dspace.cua.dao.storage.CUAEPersonStorageReportDAO com.atmire.dspace.cua.CUAStorageReportServ
 iceImpl$CUAEPersonStorageReportServiceImpl.CUAEPersonStorageReportDAO; nested exception is org.springframework.beans.factory.NoUniqueBeanDef
 initionException: No qualifying bean of type [com.atmire.dspace.cua.dao.storage.CUAEPersonStorageReportDAO] is defined: expected single matc
 hing bean but found 2: com.atmire.dspace.cua.dao.impl.CUAStorageReportDAOImpl$CUAEPersonStorageReportDAOImpl#0,com.atmire.dspace.cua.dao.imp
 l.CUAStorageReportDAOImpl$CUAEPersonStorageReportDAOImpl#1
 </code></pre><ul>
 <li>I had told Atmire about this several weeks ago&hellip; but I reminded them again in the ticket</li>
 </ul>
 <!-- raw HTML omitted -->
 </article> 
        </div> <!-- /.blog-main -->
        <aside class="col-sm-3 ml-auto blog-sidebar">
        <section class="sidebar-module">
    <h4>Recent Posts</h4>
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
 <li><a href="/cgspace-notes/2020-04/">April, 2020</a></li>
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
    </ol>
  </section>
  <section class="sidebar-module">
    <h4>Links</h4>
    <ol class="list-unstyled">
      <li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
      <li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
      <li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
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--- a/docs/404.html
+++ b/docs/404.html
@ -94,6 +94,8 @@
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 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -102,8 +104,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/categories/index.html
+++ b/docs/categories/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Categories"/>
@ -83,7 +83,7 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/categories/notes/">Notes</a></h2>
-    <p class="blog-post-meta"><time datetime="2020-06-01T13:55:39+03:00">Mon Jun 01, 2020</time> by Alan Orth</p>
+    <p class="blog-post-meta"><time datetime="2020-07-01T10:53:54+03:00">Wed Jul 01, 2020</time> by Alan Orth</p>
  </header>
  <a href='https://alanorth.github.io/cgspace-notes/categories/notes/'>Read more →</a>
@ -107,6 +107,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -115,8 +117,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/categories/index.xml
+++ b/docs/categories/index.xml
@ -6,7 +6,7 @@
    <description>Recent content in Categories on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
+    <lastBuildDate>Wed, 01 Jul 2020 10:53:54 +0300</lastBuildDate>
 	<atom:link href="https://alanorth.github.io/cgspace-notes/categories/index.xml" rel="self" type="application/rss+xml" />
@ -14,7 +14,7 @@
    <item>
      <title>Notes</title>
      <link>https://alanorth.github.io/cgspace-notes/categories/notes/</link>
-      <pubDate>Mon, 01 Jun 2020 13:55:39 +0300</pubDate>
+      <pubDate>Wed, 01 Jul 2020 10:53:54 +0300</pubDate>
      <guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid>
      <description></description>
--- a/docs/categories/notes/index.html
+++ b/docs/categories/notes/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -80,6 +80,34 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-07/">July, 2020</a></h2>
    <p class="blog-post-meta"><time datetime="2020-07-01T10:53:54+03:00">Wed Jul 01, 2020</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2020-07-01">2020-07-01</h2>
 <ul>
 <li>A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 <ul>
 <li>I looked at the PostgreSQL locks but they don&rsquo;t seem unusual</li>
 <li>I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved</li>
 <li>I restarted Tomcat and PostgreSQL and the issue was gone</li>
 </ul>
 </li>
 <li>Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the <code>5_x-prod</code> branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2020-07/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
@ -351,24 +379,6 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
@ -393,6 +403,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -401,8 +413,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/categories/notes/index.xml
+++ b/docs/categories/notes/index.xml
@ -6,11 +6,30 @@
    <description>Recent content in Notes on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
+    <lastBuildDate>Wed, 01 Jul 2020 10:53:54 +0300</lastBuildDate>
 	<atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
    <item>
      <title>July, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-07/</link>
      <pubDate>Wed, 01 Jul 2020 10:53:54 +0300</pubDate>
      <guid>https://alanorth.github.io/cgspace-notes/2020-07/</guid>
      <description>&lt;h2 id=&#34;2020-07-01&#34;&gt;2020-07-01&lt;/h2&gt;
 &lt;ul&gt;
 &lt;li&gt;A few users noticed that CGSpace wasn&amp;rsquo;t loading items today, item pages seem blank
 &lt;ul&gt;
 &lt;li&gt;I looked at the PostgreSQL locks but they don&amp;rsquo;t seem unusual&lt;/li&gt;
 &lt;li&gt;I guess this is the same &amp;ldquo;blank item page&amp;rdquo; issue that we had a few times in 2019 that we never solved&lt;/li&gt;
 &lt;li&gt;I restarted Tomcat and PostgreSQL and the issue was gone&lt;/li&gt;
 &lt;/ul&gt;
 &lt;/li&gt;
 &lt;li&gt;Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the &lt;code&gt;5_x-prod&lt;/code&gt; branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&amp;rsquo;s request&lt;/li&gt;
 &lt;/ul&gt;</description>
    </item>
    <item>
      <title>June, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-06/</link>
--- a/docs/categories/notes/page/2/index.html
+++ b/docs/categories/notes/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -80,6 +80,24 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
@ -395,33 +413,6 @@ sys     0m1.979s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/notes/" rel="prev" role="button">Previous page</a>
@ -446,6 +437,8 @@ sys     0m1.979s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -454,8 +447,6 @@ sys     0m1.979s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/categories/notes/page/3/index.html
+++ b/docs/categories/notes/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -80,6 +80,33 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
@ -320,30 +347,6 @@ sys     2m7.289s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/categories/notes/page/2/" rel="prev" role="button">Previous page</a>
@ -368,6 +371,8 @@ sys     2m7.289s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -376,8 +381,6 @@ sys     2m7.289s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/categories/notes/page/4/index.html
+++ b/docs/categories/notes/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Notes"/>
@ -80,6 +80,30 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
@ -290,6 +314,8 @@ COPY 54701
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -298,8 +324,6 @@ COPY 54701
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/cgiar-library-migration/index.html
+++ b/docs/cgiar-library-migration/index.html
@ -279,6 +279,8 @@ dspace=# select setval('handle_seq',86873);
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -287,8 +289,6 @@ dspace=# select setval('handle_seq',86873);
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/cgspace-cgcorev2-migration/index.html
+++ b/docs/cgspace-cgcorev2-migration/index.html
@ -451,6 +451,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -459,8 +461,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/index.html
+++ b/docs/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,34 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-07/">July, 2020</a></h2>
    <p class="blog-post-meta"><time datetime="2020-07-01T10:53:54+03:00">Wed Jul 01, 2020</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2020-07-01">2020-07-01</h2>
 <ul>
 <li>A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 <ul>
 <li>I looked at the PostgreSQL locks but they don&rsquo;t seem unusual</li>
 <li>I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved</li>
 <li>I restarted Tomcat and PostgreSQL and the issue was gone</li>
 </ul>
 </li>
 <li>Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the <code>5_x-prod</code> branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2020-07/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
@ -366,24 +394,6 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
@ -408,6 +418,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -416,8 +428,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/index.xml
+++ b/docs/index.xml
@ -6,11 +6,30 @@
    <description>Recent content on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
+    <lastBuildDate>Wed, 01 Jul 2020 10:53:54 +0300</lastBuildDate>
 	<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
    <item>
      <title>July, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-07/</link>
      <pubDate>Wed, 01 Jul 2020 10:53:54 +0300</pubDate>
      <guid>https://alanorth.github.io/cgspace-notes/2020-07/</guid>
      <description>&lt;h2 id=&#34;2020-07-01&#34;&gt;2020-07-01&lt;/h2&gt;
 &lt;ul&gt;
 &lt;li&gt;A few users noticed that CGSpace wasn&amp;rsquo;t loading items today, item pages seem blank
 &lt;ul&gt;
 &lt;li&gt;I looked at the PostgreSQL locks but they don&amp;rsquo;t seem unusual&lt;/li&gt;
 &lt;li&gt;I guess this is the same &amp;ldquo;blank item page&amp;rdquo; issue that we had a few times in 2019 that we never solved&lt;/li&gt;
 &lt;li&gt;I restarted Tomcat and PostgreSQL and the issue was gone&lt;/li&gt;
 &lt;/ul&gt;
 &lt;/li&gt;
 &lt;li&gt;Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the &lt;code&gt;5_x-prod&lt;/code&gt; branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&amp;rsquo;s request&lt;/li&gt;
 &lt;/ul&gt;</description>
    </item>
    <item>
      <title>June, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-06/</link>
--- a/docs/page/2/index.html
+++ b/docs/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,24 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
@ -410,33 +428,6 @@ sys     0m1.979s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a>
@ -461,6 +452,8 @@ sys     0m1.979s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -469,8 +462,6 @@ sys     0m1.979s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/page/3/index.html
+++ b/docs/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,33 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
@ -335,30 +362,6 @@ sys     2m7.289s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a>
@ -383,6 +386,8 @@ sys     2m7.289s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -391,8 +396,6 @@ sys     2m7.289s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/page/4/index.html
+++ b/docs/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,30 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
@ -390,24 +414,6 @@ COPY 54701
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
    <p class="blog-post-meta"><time datetime="2017-05-01T16:21:52+02:00">Mon May 01, 2017</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  2017-05-01  ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items:  https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683    2017-05-02  Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request  2017-05-04  Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
  <a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a>
@ -432,6 +438,8 @@ COPY 54701
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -440,8 +448,6 @@ COPY 54701
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/page/5/index.html
+++ b/docs/page/5/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,24 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
    <p class="blog-post-meta"><time datetime="2017-05-01T16:21:52+02:00">Mon May 01, 2017</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  2017-05-01  ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items:  https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683    2017-05-02  Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request  2017-05-04  Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
  <a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
@ -356,37 +374,6 @@ $ git rebase -i dspace-5.5
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
    <p class="blog-post-meta"><time datetime="2016-07-01T10:53:00+03:00">Fri Jul 01, 2016</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  <h2 id="2016-07-01">2016-07-01</h2>
 <ul>
 <li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
 <li>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</li>
 </ul>
 <pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 UPDATE 95
 dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 text_value
 ------------
 (0 rows)
 </code></pre><ul>
 <li>In this case the select query was showing 95 results before the update</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/page/4/" rel="prev" role="button">Previous page</a>
@ -411,6 +398,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -419,8 +408,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/page/6/index.html
+++ b/docs/page/6/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="CGSpace Notes"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,37 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
    <p class="blog-post-meta"><time datetime="2016-07-01T10:53:00+03:00">Fri Jul 01, 2016</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  <h2 id="2016-07-01">2016-07-01</h2>
 <ul>
 <li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
 <li>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</li>
 </ul>
 <pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 UPDATE 95
 dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 text_value
 ------------
 (0 rows)
 </code></pre><ul>
 <li>In this case the select query was showing 95 results before the update</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
@ -322,6 +353,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -330,8 +363,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/index.html
+++ b/docs/posts/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,34 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-07/">July, 2020</a></h2>
    <p class="blog-post-meta"><time datetime="2020-07-01T10:53:54+03:00">Wed Jul 01, 2020</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2020-07-01">2020-07-01</h2>
 <ul>
 <li>A few users noticed that CGSpace wasn&rsquo;t loading items today, item pages seem blank
 <ul>
 <li>I looked at the PostgreSQL locks but they don&rsquo;t seem unusual</li>
 <li>I guess this is the same &ldquo;blank item page&rdquo; issue that we had a few times in 2019 that we never solved</li>
 <li>I restarted Tomcat and PostgreSQL and the issue was gone</li>
 </ul>
 </li>
 <li>Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the <code>5_x-prod</code> branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&rsquo;s request</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2020-07/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2020-06/">June, 2020</a></h2>
@ -366,24 +394,6 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
@ -408,6 +418,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -416,8 +428,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/index.xml
+++ b/docs/posts/index.xml
@ -6,11 +6,30 @@
    <description>Recent content in Posts on CGSpace Notes</description>
    <generator>Hugo -- gohugo.io</generator>
    <language>en-us</language>
-    <lastBuildDate>Mon, 01 Jun 2020 13:55:39 +0300</lastBuildDate>
+    <lastBuildDate>Wed, 01 Jul 2020 10:53:54 +0300</lastBuildDate>
 	<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
    <item>
      <title>July, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-07/</link>
      <pubDate>Wed, 01 Jul 2020 10:53:54 +0300</pubDate>
      <guid>https://alanorth.github.io/cgspace-notes/2020-07/</guid>
      <description>&lt;h2 id=&#34;2020-07-01&#34;&gt;2020-07-01&lt;/h2&gt;
 &lt;ul&gt;
 &lt;li&gt;A few users noticed that CGSpace wasn&amp;rsquo;t loading items today, item pages seem blank
 &lt;ul&gt;
 &lt;li&gt;I looked at the PostgreSQL locks but they don&amp;rsquo;t seem unusual&lt;/li&gt;
 &lt;li&gt;I guess this is the same &amp;ldquo;blank item page&amp;rdquo; issue that we had a few times in 2019 that we never solved&lt;/li&gt;
 &lt;li&gt;I restarted Tomcat and PostgreSQL and the issue was gone&lt;/li&gt;
 &lt;/ul&gt;
 &lt;/li&gt;
 &lt;li&gt;Since I was restarting Tomcat anyways I decided to redeploy the latest changes from the &lt;code&gt;5_x-prod&lt;/code&gt; branch and I added a note about COVID-19 items to the CGSpace frontpage at Peter&amp;rsquo;s request&lt;/li&gt;
 &lt;/ul&gt;</description>
    </item>
    <item>
      <title>June, 2020</title>
      <link>https://alanorth.github.io/cgspace-notes/2020-06/</link>
--- a/docs/posts/page/2/index.html
+++ b/docs/posts/page/2/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,24 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
    <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51+03:00">Tue Oct 01, 2019</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  2019-10-01  Udana from IWMI asked me for a CSV export of their community on CGSpace  I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:    $ csvcut -c 'id,dc.
  <a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
@ -410,33 +428,6 @@ sys     0m1.979s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
@ -461,6 +452,8 @@ sys     0m1.979s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -469,8 +462,6 @@ sys     0m1.979s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/page/3/index.html
+++ b/docs/posts/page/3/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,33 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30+02:00">Sun Dec 02, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-12-01">2018-12-01</h2>
 <ul>
 <li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li>
 <li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
 <li>Then I ran all system updates and restarted the server</li>
 </ul>
 <h2 id="2018-12-02">2018-12-02</h2>
 <ul>
 <li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
@ -335,30 +362,6 @@ sys     2m7.289s
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
@ -383,6 +386,8 @@ sys     2m7.289s
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -391,8 +396,6 @@ sys     2m7.289s
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/page/4/index.html
+++ b/docs/posts/page/4/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,30 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
    <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54+02:00">Thu Feb 01, 2018</time> by Alan Orth in 
 <span class="fas fa-folder" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/categories/notes/" rel="category tag">Notes</a>
 </p>
  </header>
  <h2 id="2018-02-01">2018-02-01</h2>
 <ul>
 <li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li>
 <li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li>
 <li>Yesterday I figured out how to monitor DSpace sessions using JMX</li>
 <li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
@ -390,24 +414,6 @@ COPY 54701
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
    <p class="blog-post-meta"><time datetime="2017-05-01T16:21:52+02:00">Mon May 01, 2017</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  2017-05-01  ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items:  https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683    2017-05-02  Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request  2017-05-04  Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
  <a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a>
@ -432,6 +438,8 @@ COPY 54701
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -440,8 +448,6 @@ COPY 54701
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/page/5/index.html
+++ b/docs/posts/page/5/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,24 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
    <p class="blog-post-meta"><time datetime="2017-05-01T16:21:52+02:00">Mon May 01, 2017</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  2017-05-01  ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items:  https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683    2017-05-02  Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request  2017-05-04  Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
  <a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
@ -356,37 +374,6 @@ $ git rebase -i dspace-5.5
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
    <p class="blog-post-meta"><time datetime="2016-07-01T10:53:00+03:00">Fri Jul 01, 2016</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  <h2 id="2016-07-01">2016-07-01</h2>
 <ul>
 <li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
 <li>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</li>
 </ul>
 <pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 UPDATE 95
 dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 text_value
 ------------
 (0 rows)
 </code></pre><ul>
 <li>In this case the select query was showing 95 results before the update</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
 </article> 
 <nav class="blog-pagination">
  <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/4/" rel="prev" role="button">Previous page</a>
@ -411,6 +398,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -419,8 +408,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/posts/page/6/index.html
+++ b/docs/posts/page/6/index.html
@ -9,7 +9,7 @@
 <meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
 <meta property="og:type" content="website" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
-<meta property="og:updated_time" content="2020-06-30T15:47:18+03:00" />
+<meta property="og:updated_time" content="2020-07-01T10:53:54+03:00" />
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="Posts"/>
@ -28,7 +28,7 @@
    "@type": "Person",
    "name": "Alan Orth"
  },
-  "dateModified": "2020-06-01T13:55:39+03:00",
+  "dateModified": "2020-07-01T10:53:54+03:00",
  "keywords": "notes,""migration,""notes,",
  "description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
 }
@ -95,6 +95,37 @@
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
    <p class="blog-post-meta"><time datetime="2016-07-01T10:53:00+03:00">Fri Jul 01, 2016</time> by Alan Orth in 
 <span class="fas fa-tag" aria-hidden="true"></span>&nbsp;<a href="/cgspace-notes/tags/notes/" rel="tag">Notes</a>
 </p>
  </header>
  <h2 id="2016-07-01">2016-07-01</h2>
 <ul>
 <li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
 <li>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</li>
 </ul>
 <pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 UPDATE 95
 dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
 text_value
 ------------
 (0 rows)
 </code></pre><ul>
 <li>In this case the select query was showing 95 results before the update</li>
 </ul>
  <a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
 </article> 
 <article class="blog-post">
  <header>
    <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
@ -322,6 +353,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -330,8 +363,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/robots.txt
+++ b/docs/robots.txt
@ -3,9 +3,10 @@ User-agent: *
 Disallow: /cgspace-notes/categories/
 Disallow: /cgspace-notes/
-Disallow: /cgspace-notes/2020-06/
+Disallow: /cgspace-notes/2020-07/
 Disallow: /cgspace-notes/categories/notes/
 Disallow: /cgspace-notes/posts/
 Disallow: /cgspace-notes/2020-06/
 Disallow: /cgspace-notes/2020-05/
 Disallow: /cgspace-notes/2020-04/
 Disallow: /cgspace-notes/2020-03/
--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@ -4,27 +4,32 @@
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
-    <lastmod>2020-06-30T15:47:18+03:00</lastmod>
+    <lastmod>2020-07-01T10:53:54+03:00</lastmod>
  </url>
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2020-06-30T15:47:18+03:00</lastmod>
+    <lastmod>2020-07-01T10:53:54+03:00</lastmod>
  </url>
  <url>
-    <loc>https://alanorth.github.io/cgspace-notes/2020-06/</loc>
+    <loc>https://alanorth.github.io/cgspace-notes/2020-07/</loc>
-    <lastmod>2020-06-30T15:47:18+03:00</lastmod>
+    <lastmod>2020-07-01T10:53:54+03:00</lastmod>
  </url>
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
-    <lastmod>2020-06-30T15:47:18+03:00</lastmod>
+    <lastmod>2020-07-01T10:53:54+03:00</lastmod>
  </url>
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
-    <lastmod>2020-06-30T15:47:18+03:00</lastmod>
+    <lastmod>2020-07-01T10:53:54+03:00</lastmod>
  </url>
  <url>
    <loc>https://alanorth.github.io/cgspace-notes/2020-06/</loc>
    <lastmod>2020-06-30T19:21:50+03:00</lastmod>
  </url>
  <url>
--- a/docs/tags/index.html
+++ b/docs/tags/index.html
@ -121,6 +121,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -129,8 +131,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/tags/migration/index.html
+++ b/docs/tags/migration/index.html
@ -134,6 +134,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -142,8 +144,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/tags/notes/index.html
+++ b/docs/tags/notes/index.html
@ -384,6 +384,8 @@ DELETE 1
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -392,8 +394,6 @@ DELETE 1
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/tags/notes/page/2/index.html
+++ b/docs/tags/notes/page/2/index.html
@ -370,6 +370,8 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -378,8 +380,6 @@ dspacetest=# select text_value from  metadatavalue where metadata_field_id=3 and
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>
--- a/docs/tags/notes/page/3/index.html
+++ b/docs/tags/notes/page/3/index.html
@ -179,6 +179,8 @@
    <ol class="list-unstyled">
 <li><a href="/cgspace-notes/2020-07/">July, 2020</a></li>
 <li><a href="/cgspace-notes/2020-06/">June, 2020</a></li>
 <li><a href="/cgspace-notes/2020-05/">May, 2020</a></li>
@ -187,8 +189,6 @@
 <li><a href="/cgspace-notes/2020-03/">March, 2020</a></li>
 <li><a href="/cgspace-notes/2020-02/">February, 2020</a></li>
    </ol>
  </section>