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Add notes for 2023-08-23
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@ -172,5 +172,35 @@ $ ./run.sh -s http://localhost:8081/solr/statistics -a import -o /tmp/statistics
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- This time looking at the thumbnail responses in item endpoints
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- According to [the documentation](https://github.com/DSpace/RestContract/blob/main/items.md#main-thumbnail) the API will respond with HTTP 200 if there is a thumbnail, and HTTP 204 if there is no content
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- That means we need to make the request before we can even find out!
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- Tim on DSpace Slack pointed out the DSpace 7 REST API's [projections](https://github.com/DSpace/RestContract/blob/main/projections.md)
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- This means we can embed resources like thumbnail and owningCollection in the item (and other) requests, for example: https://dspace7test.ilri.org/server/api/discover/search/objects?dsoType=item&embed=thumbnail,owningCollection
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## 2023-08-23
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- I benchmarked the DSpace 7 REST API with the new embeds and it took four hours and seventeen minutes to get all 106,000 items on DSpace 7 Test
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- So this is much slower than the results I saw earlier this week, but maybe slightly faster than DSpace 6?
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- Maria from Alliance contacted me to say they have agreed to use UN M.49 regions more strictly in TIP, so they want to replace our non-standard "Latin America" region with "Latin America and the Caribbean", "Caribbean" and "Americas" on all Alliance outputs
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- I exported their community on CGSpace and fixed the metadata in OpenRefine
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- I tried to run `dspace cleanup -v` on CGSpace, but got this error:
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```
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Caused by: org.postgresql.util.PSQLException: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
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Detail: Key (uuid)=(61bff7da-c8e3-420f-841c-ec5e8238d716) is still referenced from table "bundle".
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```
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- The solution, as always, is to delete those IDs manually in PostgreSQL:
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```
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$ psql -d dspace -c "UPDATE bundle SET primary_bitstream_id=NULL WHERE primary_bitstream_id IN ('61bff7da-c8e3-420f-841c-ec5e8238d716');"
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UPDATE 1
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```
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- I also tried to delete all users who haven't logged in since 2017 using the groomer script, but it crashes due to those users still having items or workflows or whatever:
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```console
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$ dspace dsrun org.dspace.eperson.Groomer -a -b 08/23/2017 -d
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```
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- I see that it is now [possible in DSpace 7 to delete such users](https://github.com/DSpace/DSpace/pull/2229) so we will have to wait
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<!-- vim: set sw=2 ts=2: -->
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@ -19,7 +19,7 @@ Start working on some batch uploads for IFPRI
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<meta property="og:type" content="article" />
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<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2023-08/" />
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<meta property="article:published_time" content="2023-08-03T11:18:36+03:00" />
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<meta property="article:modified_time" content="2023-08-18T23:54:07+03:00" />
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<meta property="article:modified_time" content="2023-08-22T17:28:49+03:00" />
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@ -44,9 +44,9 @@ Start working on some batch uploads for IFPRI
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"@type": "BlogPosting",
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"headline": "August, 2023",
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"url": "https://alanorth.github.io/cgspace-notes/2023-08/",
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"wordCount": "1254",
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"wordCount": "1514",
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"datePublished": "2023-08-03T11:18:36+03:00",
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"dateModified": "2023-08-18T23:54:07+03:00",
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"dateModified": "2023-08-22T17:28:49+03:00",
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"author": {
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"@type": "Person",
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"name": "Alan Orth"
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@ -322,6 +322,39 @@ Start working on some batch uploads for IFPRI
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<li>That means we need to make the request before we can even find out!</li>
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</ul>
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</li>
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<li>Tim on DSpace Slack pointed out the DSpace 7 REST API’s <a href="https://github.com/DSpace/RestContract/blob/main/projections.md">projections</a>
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<ul>
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<li>This means we can embed resources like thumbnail and owningCollection in the item (and other) requests, for example: <a href="https://dspace7test.ilri.org/server/api/discover/search/objects?dsoType=item&embed=thumbnail,owningCollection">https://dspace7test.ilri.org/server/api/discover/search/objects?dsoType=item&embed=thumbnail,owningCollection</a></li>
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</ul>
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</li>
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</ul>
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<h2 id="2023-08-23">2023-08-23</h2>
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<ul>
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<li>I benchmarked the DSpace 7 REST API with the new embeds and it took four hours and seventeen minutes to get all 106,000 items on DSpace 7 Test
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<ul>
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<li>So this is much slower than the results I saw earlier this week, but maybe slightly faster than DSpace 6?</li>
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</ul>
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</li>
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<li>Maria from Alliance contacted me to say they have agreed to use UN M.49 regions more strictly in TIP, so they want to replace our non-standard “Latin America” region with “Latin America and the Caribbean”, “Caribbean” and “Americas” on all Alliance outputs
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<ul>
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<li>I exported their community on CGSpace and fixed the metadata in OpenRefine</li>
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</ul>
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</li>
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<li>I tried to run <code>dspace cleanup -v</code> on CGSpace, but got this error:</li>
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</ul>
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<pre tabindex="0"><code>Caused by: org.postgresql.util.PSQLException: ERROR: update or delete on table "bitstream" violates foreign key constraint "bundle_primary_bitstream_id_fkey" on table "bundle"
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Detail: Key (uuid)=(61bff7da-c8e3-420f-841c-ec5e8238d716) is still referenced from table "bundle".
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</code></pre><ul>
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<li>The solution, as always, is to delete those IDs manually in PostgreSQL:</li>
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</ul>
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<pre tabindex="0"><code>$ psql -d dspace -c "UPDATE bundle SET primary_bitstream_id=NULL WHERE primary_bitstream_id IN ('61bff7da-c8e3-420f-841c-ec5e8238d716');"
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UPDATE 1
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</code></pre><ul>
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<li>I also tried to delete all users who haven’t logged in since 2017 using the groomer script, but it crashes due to those users still having items or workflows or whatever:</li>
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</ul>
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<div class="highlight"><pre tabindex="0" style="color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;"><code class="language-console" data-lang="console"><span style="display:flex;"><span>$ dspace dsrun org.dspace.eperson.Groomer -a -b 08/23/2017 -d
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</span></span></code></pre></div><ul>
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<li>I see that it is now <a href="https://github.com/DSpace/DSpace/pull/2229">possible in DSpace 7 to delete such users</a> so we will have to wait</li>
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</ul>
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||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2023-08-18T23:54:07+03:00" />
|
||||
<meta property="og:updated_time" content="2023-08-22T17:28:49+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2023-08-18T23:54:07+03:00" />
|
||||
<meta property="og:updated_time" content="2023-08-22T17:28:49+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2023-08-18T23:54:07+03:00" />
|
||||
<meta property="og:updated_time" content="2023-08-22T17:28:49+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2023-08-18T23:54:07+03:00" />
|
||||
<meta property="og:updated_time" content="2023-08-22T17:28:49+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -10,7 +10,7 @@
|
||||
<meta property="og:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." />
|
||||
<meta property="og:type" content="website" />
|
||||
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
|
||||
<meta property="og:updated_time" content="2023-08-18T23:54:07+03:00" />
|
||||
<meta property="og:updated_time" content="2023-08-22T17:28:49+03:00" />
|
||||
|
||||
|
||||
|
||||
|
@ -3,19 +3,19 @@
|
||||
xmlns:xhtml="http://www.w3.org/1999/xhtml">
|
||||
<url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2023-08/</loc>
|
||||
<lastmod>2023-08-18T23:54:07+03:00</lastmod>
|
||||
<lastmod>2023-08-22T17:28:49+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
|
||||
<lastmod>2023-08-18T23:54:07+03:00</lastmod>
|
||||
<lastmod>2023-08-22T17:28:49+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/</loc>
|
||||
<lastmod>2023-08-18T23:54:07+03:00</lastmod>
|
||||
<lastmod>2023-08-22T17:28:49+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
|
||||
<lastmod>2023-08-18T23:54:07+03:00</lastmod>
|
||||
<lastmod>2023-08-22T17:28:49+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
|
||||
<lastmod>2023-08-18T23:54:07+03:00</lastmod>
|
||||
<lastmod>2023-08-22T17:28:49+03:00</lastmod>
|
||||
</url><url>
|
||||
<loc>https://alanorth.github.io/cgspace-notes/2023-07/</loc>
|
||||
<lastmod>2023-08-02T23:04:11+03:00</lastmod>
|
||||
|
Loading…
Reference in New Issue
Block a user