Add notes for 2018-07-15

content/posts/2018-07.md

@@ -334,4 +334,50 @@ dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue
 COPY 4518
 ```
 
+## 2018-07-15
+
+- Run all system updates on CGSpace, add latest metadata changes from last week, and start the Linode instance upgrade
+- After the upgrade I see we have more disk space available in the instance's dashboard, so I shut the instance down and resized it from 392GB to 650GB
+- The resize was very quick (less than one minute) and after booting the instance back up I now have 631GB for the root filesystem (with 267GB available)!
+- Peter had asked a question about how mapped items are displayed in the Altmetric dashboard
+- For example, [10568/82810](10568/82810) is mapped to four collections, but only shows up in one "department" in their dashboard
+- Altmetric help said that [according to OAI that item is only in one department](https://cgspace.cgiar.org/oai/request?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai:cgspace.cgiar.org:10568/82810)
+- I noticed that indeed there was only one collection listed, so I forced an OAI re-import on CGSpace:
+
+```
+$ dspace oai import -c
+OAI 2.0 manager action started
+Clearing index
+Index cleared
+Using full import.
+Full import
+100 items imported so far...
+200 items imported so far...
+...
+73900 items imported so far...
+Total: 73925 items
+Purging cached OAI responses.
+OAI 2.0 manager action ended. It took 697 seconds.
+```
+
+- Now I see four colletions in OAI for that item!
+- I need to ask the dspace-tech mailing list if the nightly OAI import catches the case of old items that have had metadata or mappings change
+- ICARDA sent me a list of the ORCID iDs they have in the MEL system and it looks like almost 150 are new and unique to us!
+
+```
+$ cat dspace/config/controlled-vocabularies/cg-creator-id.xml | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq | wc -l
+1020
+$ cat dspace/config/controlled-vocabularies/cg-creator-id.xml MEL\ ORCID.json | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq | wc -l
+1158
+```
+
+- I combined the two lists and regenerated the names for all our the ORCID iDs using my [resolve-orcids.py](https://gist.github.com/alanorth/57a88379126d844563c1410bd7b8d12b) script:
+
+```
+$ cat dspace/config/controlled-vocabularies/cg-creator-id.xml MEL\ ORCID.json | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2018-07-15-orcid-ids.txt
+$ ./resolve-orcids.py -i /tmp/2018-07-15-orcid-ids.txt -o /tmp/2018-07-15-resolved-orcids.txt -d
+```
+
+- Help Udana from WLE understand some Altmetrics concepts
+
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