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Add notes for 2020-03-26

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Alan Orth
2020-03-26 15:14:14 +02:00
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@ -278,4 +278,40 @@ $ lein run /tmp/affiliations.csv name id
- I sent Atmire a message to ask if they managed to start working on the DSpace 6 port, as the last communication was twenty-six days ago when they said they were going to secure technical resources to do so
- Start adapting the `dspace` role in our [Ansible infrastructure playbooks](https://github.com/ilri/rmg-ansible-public) for DSpace 6 support
## 2020-03-26
- More work adapting the `dspace` role in our Ansible infrastructure scripts to DSpace 6
- Update Tomcat to version 7.0.103 in the Ansible infrastrcutrue playbooks and deploy on DSpace Test (linode26)
- Maria sent me a few new ORCID identifiers from Bioversity so I combined them with our existing ones, filtered the unique ones, and then resolved their names using my `resolve-orcids.py` script:
```
$ cat ~/src/git/DSpace/dspace/config/controlled-vocabularies/cg-creator-id.xml /tmp/bioversity-orcids | grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort | uniq > /tmp/2020-03-26-combined-orcids.txt
$ ./resolve-orcids.py -i /tmp/2020-03-26-combined-orcids.txt -o /tmp/2020-03-26-combined-names.txt -d
# sort names, copy to cg-creator-id.xml, add XML formatting, and then format with tidy (preserving accents)
$ tidy -xml -utf8 -iq -m -w 0 dspace/config/controlled-vocabularies/cg-creator-id.xml
```
- I checked the database for likely matches to the author name and then created a CSV with the author names and ORCID iDs:
```
dc.contributor.author,cg.creator.id
"King, Brian","Brian King: 0000-0002-7056-9214"
"Ortiz-Crespo, Berta","Berta Ortiz-Crespo: 0000-0002-6664-0815"
"Ekesa, Beatrice","Beatrice Ekesa: 0000-0002-2630-258X"
"Ekesa, B.","Beatrice Ekesa: 0000-0002-2630-258X"
"Ekesa, B.N.","Beatrice Ekesa: 0000-0002-2630-258X"
"Gullotta, G.","Gaia Gullotta: 0000-0002-2240-3869"
```
- Running the `add-orcid-identifiers-csv.py` script I added 32 ORCID iDs to items on CGSpace!
```
$ ./add-orcid-identifiers-csv.py -i /tmp/2020-03-26-ciat-orcids.csv -db dspace -u dspace -p 'fuuu'
```
- Udana from IWMI asked about some items that are missing Altmetric donuts on CGSpace
- One of them had a link to the paper on Nature, but was missing a DOI
- [The second item](https://hdl.handle.net/10568/106899) had no donut so I [tweeted its handle](https://twitter.com/mralanorth/status/1243158045540134913)
- [The third item](https://hdl.handle.net/10568/107258) also had no handle so I [tweeted it](https://twitter.com/mralanorth/status/1243158786392625153) as well
- Abenet pointed out [one item](https://hdl.handle.net/10568/106573) that she had tweeted last week that is missing a donut as well, so I [tweeted it](https://twitter.com/mralanorth/status/1243163710241345536) too
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