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Alan Orth
2022-03-04 15:30:06 +03:00
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@ -48,7 +48,7 @@ DELETE 1
But after this I tried to delete the item from the XMLUI and it is still present…
"/>
<meta name="generator" content="Hugo 0.92.2" />
<meta name="generator" content="Hugo 0.93.1" />
@ -168,7 +168,7 @@ dspace=# DELETE FROM item WHERE item_id=74648;
</ul>
</li>
</ul>
<pre tabindex="0"><code>$ curl -f -H &quot;Content-Type: application/json&quot; -X POST &quot;http://localhost:8080/rest/items/find-by-metadata-field&quot; -d '{&quot;key&quot;:&quot;cg.subject.cpwf&quot;, &quot;value&quot;:&quot;WATER MANAGEMENT&quot;,&quot;language&quot;: &quot;en_US&quot;}'
<pre tabindex="0"><code>$ curl -f -H &#34;Content-Type: application/json&#34; -X POST &#34;http://localhost:8080/rest/items/find-by-metadata-field&#34; -d &#39;{&#34;key&#34;:&#34;cg.subject.cpwf&#34;, &#34;value&#34;:&#34;WATER MANAGEMENT&#34;,&#34;language&#34;: &#34;en_US&#34;}&#39;
curl: (22) The requested URL returned error: 401 Unauthorized
</code></pre><ul>
<li>The DSpace log shows the item ID (because I modified the error text):</li>
@ -282,52 +282,52 @@ Please see the DSpace documentation for assistance.
<ul>
<li>The number of unique sessions today is <em>ridiculously</em> high compared to the last few days considering it&rsquo;s only 12:30PM right now:</li>
</ul>
<pre tabindex="0"><code>$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-06 | sort | uniq | wc -l
<pre tabindex="0"><code>$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-06 | sort | uniq | wc -l
101108
$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-05 | sort | uniq | wc -l
$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-05 | sort | uniq | wc -l
14618
$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-04 | sort | uniq | wc -l
$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-04 | sort | uniq | wc -l
14946
$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-03 | sort | uniq | wc -l
$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-03 | sort | uniq | wc -l
6410
$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-02 | sort | uniq | wc -l
$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-02 | sort | uniq | wc -l
7758
$ grep -o -E 'session_id=[A-Z0-9]{32}' dspace.log.2019-05-01 | sort | uniq | wc -l
$ grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; dspace.log.2019-05-01 | sort | uniq | wc -l
20528
</code></pre><ul>
<li>The number of unique IP addresses from 2 to 6 AM this morning is already several times higher than the average for that time of the morning this past week:</li>
</ul>
<pre tabindex="0"><code># zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E '06/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
<pre tabindex="0"><code># zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &#39;06/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
7127
# zcat --force /var/log/nginx/access.log.1 /var/log/nginx/access.log.2.gz | grep -E '05/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.1 /var/log/nginx/access.log.2.gz | grep -E &#39;05/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
1231
# zcat --force /var/log/nginx/access.log.2.gz /var/log/nginx/access.log.3.gz | grep -E '04/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.2.gz /var/log/nginx/access.log.3.gz | grep -E &#39;04/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
1255
# zcat --force /var/log/nginx/access.log.3.gz /var/log/nginx/access.log.4.gz | grep -E '03/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.3.gz /var/log/nginx/access.log.4.gz | grep -E &#39;03/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
1736
# zcat --force /var/log/nginx/access.log.4.gz /var/log/nginx/access.log.5.gz | grep -E '02/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.4.gz /var/log/nginx/access.log.5.gz | grep -E &#39;02/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
1573
# zcat --force /var/log/nginx/access.log.5.gz /var/log/nginx/access.log.6.gz | grep -E '01/May/2019:(02|03|04|05|06)' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.5.gz /var/log/nginx/access.log.6.gz | grep -E &#39;01/May/2019:(02|03|04|05|06)&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
1410
</code></pre><ul>
<li>Just this morning between the hours of 2 and 6 the number of unique sessions was <em>very</em> high compared to previous mornings:</li>
</ul>
<pre tabindex="0"><code>$ cat dspace.log.2019-05-06 | grep -E '2019-05-06 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
<pre tabindex="0"><code>$ cat dspace.log.2019-05-06 | grep -E &#39;2019-05-06 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
83650
$ cat dspace.log.2019-05-05 | grep -E '2019-05-05 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-05 | grep -E &#39;2019-05-05 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
2547
$ cat dspace.log.2019-05-04 | grep -E '2019-05-04 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-04 | grep -E &#39;2019-05-04 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
2574
$ cat dspace.log.2019-05-03 | grep -E '2019-05-03 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-03 | grep -E &#39;2019-05-03 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
2911
$ cat dspace.log.2019-05-02 | grep -E '2019-05-02 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-02 | grep -E &#39;2019-05-02 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
2704
$ cat dspace.log.2019-05-01 | grep -E '2019-05-01 (02|03|04|05|06):' | grep -o -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-01 | grep -E &#39;2019-05-01 (02|03|04|05|06):&#39; | grep -o -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
3699
</code></pre><ul>
<li>Most of the requests were GETs:</li>
</ul>
<pre tabindex="0"><code># cat /var/log/nginx/{access,library-access}.log /var/log/nginx/{access,library-access}.log.1 | grep -E '06/May/2019:(02|03|04|05|06)' | grep -o -E &quot;(GET|HEAD|POST|PUT)&quot; | sort | uniq -c | sort -n
<pre tabindex="0"><code># cat /var/log/nginx/{access,library-access}.log /var/log/nginx/{access,library-access}.log.1 | grep -E &#39;06/May/2019:(02|03|04|05|06)&#39; | grep -o -E &#34;(GET|HEAD|POST|PUT)&#34; | sort | uniq -c | sort -n
1 PUT
98 POST
2845 HEAD
@ -336,19 +336,19 @@ $ cat dspace.log.2019-05-01 | grep -E '2019-05-01 (02|03|04|05|06):' | grep -o -
<li>I&rsquo;m not exactly sure what happened this morning, but it looks like some legitimate user traffic—perhaps someone launched a new publication and it got a bunch of hits?</li>
<li>Looking again, I see 84,000 requests to <code>/handle</code> this morning (not including logs for library.cgiar.org because those get HTTP 301 redirect to CGSpace and appear here in <code>access.log</code>):</li>
</ul>
<pre tabindex="0"><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E '06/May/2019:(02|03|04|05|06)' | grep -c -o -E &quot; /handle/[0-9]+/[0-9]+&quot;
<pre tabindex="0"><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &#39;06/May/2019:(02|03|04|05|06)&#39; | grep -c -o -E &#34; /handle/[0-9]+/[0-9]+&#34;
84350
</code></pre><ul>
<li>But it would be difficult to find a pattern for those requests because they cover 78,000 <em>unique</em> Handles (ie direct browsing of items, collections, or communities) and only 2,492 discover/browse (total, not unique):</li>
</ul>
<pre tabindex="0"><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E '06/May/2019:(02|03|04|05|06)' | grep -o -E &quot; /handle/[0-9]+/[0-9]+ HTTP&quot; | sort | uniq | wc -l
<pre tabindex="0"><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &#39;06/May/2019:(02|03|04|05|06)&#39; | grep -o -E &#34; /handle/[0-9]+/[0-9]+ HTTP&#34; | sort | uniq | wc -l
78104
# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E '06/May/2019:(02|03|04|05|06)' | grep -o -E &quot; /handle/[0-9]+/[0-9]+/(discover|browse)&quot; | wc -l
# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &#39;06/May/2019:(02|03|04|05|06)&#39; | grep -o -E &#34; /handle/[0-9]+/[0-9]+/(discover|browse)&#34; | wc -l
2492
</code></pre><ul>
<li>In other news, I see some IP is making several requests per second to the exact same REST API endpoints, for example:</li>
</ul>
<pre tabindex="0"><code># grep /rest/handle/10568/3703?expand=all rest.log | awk '{print $1}' | sort | uniq -c
<pre tabindex="0"><code># grep /rest/handle/10568/3703?expand=all rest.log | awk &#39;{print $1}&#39; | sort | uniq -c
3 2a01:7e00::f03c:91ff:fe0a:d645
113 63.32.242.35
</code></pre><ul>
@ -363,28 +363,28 @@ $ cat dspace.log.2019-05-01 | grep -E '2019-05-01 (02|03|04|05|06):' | grep -o -
<ul>
<li>The total number of unique IPs on CGSpace yesterday was almost 14,000, which is several thousand higher than previous day totals:</li>
</ul>
<pre tabindex="0"><code># zcat --force /var/log/nginx/access.log.1 /var/log/nginx/access.log.2.gz | grep -E '06/May/2019' | awk '{print $1}' | sort | uniq | wc -l
<pre tabindex="0"><code># zcat --force /var/log/nginx/access.log.1 /var/log/nginx/access.log.2.gz | grep -E &#39;06/May/2019&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
13969
# zcat --force /var/log/nginx/access.log.2.gz /var/log/nginx/access.log.3.gz | grep -E '05/May/2019' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.2.gz /var/log/nginx/access.log.3.gz | grep -E &#39;05/May/2019&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
5936
# zcat --force /var/log/nginx/access.log.3.gz /var/log/nginx/access.log.4.gz | grep -E '04/May/2019' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.3.gz /var/log/nginx/access.log.4.gz | grep -E &#39;04/May/2019&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
6229
# zcat --force /var/log/nginx/access.log.4.gz /var/log/nginx/access.log.5.gz | grep -E '03/May/2019' | awk '{print $1}' | sort | uniq | wc -l
# zcat --force /var/log/nginx/access.log.4.gz /var/log/nginx/access.log.5.gz | grep -E &#39;03/May/2019&#39; | awk &#39;{print $1}&#39; | sort | uniq | wc -l
8051
</code></pre><ul>
<li>Total number of sessions yesterday was <em>much</em> higher compared to days last week:</li>
</ul>
<pre tabindex="0"><code>$ cat dspace.log.2019-05-06 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
<pre tabindex="0"><code>$ cat dspace.log.2019-05-06 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
144160
$ cat dspace.log.2019-05-05 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-05 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
57269
$ cat dspace.log.2019-05-04 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-04 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
58648
$ cat dspace.log.2019-05-03 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-03 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
27883
$ cat dspace.log.2019-05-02 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-02 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
26996
$ cat dspace.log.2019-05-01 | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
$ cat dspace.log.2019-05-01 | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
61866
</code></pre><ul>
<li>The usage statistics seem to agree that yesterday was crazy:</li>
@ -423,9 +423,9 @@ Please see the DSpace documentation for assistance.
<li>Help Moayad with certbot-auto for Let&rsquo;s Encrypt scripts on the new AReS server (linode20)</li>
<li>Normalize all <code>text_lang</code> values for metadata on CGSpace and DSpace Test (as I had tested last month):</li>
</ul>
<pre tabindex="0"><code>UPDATE metadatavalue SET text_lang='en_US' WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IN ('ethnob', 'en', '*', 'E.', '');
UPDATE metadatavalue SET text_lang='en_US' WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IS NULL;
UPDATE metadatavalue SET text_lang='es_ES' WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IN ('es', 'spa');
<pre tabindex="0"><code>UPDATE metadatavalue SET text_lang=&#39;en_US&#39; WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IN (&#39;ethnob&#39;, &#39;en&#39;, &#39;*&#39;, &#39;E.&#39;, &#39;&#39;);
UPDATE metadatavalue SET text_lang=&#39;en_US&#39; WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IS NULL;
UPDATE metadatavalue SET text_lang=&#39;es_ES&#39; WHERE resource_type_id=2 AND metadata_field_id != 28 AND text_lang IN (&#39;es&#39;, &#39;spa&#39;);
</code></pre><ul>
<li>Send Francesca Giampieri from Bioversity a CSV export of all their items issued in 2018
<ul>
@ -454,7 +454,7 @@ UPDATE metadatavalue SET text_lang='es_ES' WHERE resource_type_id=2 AND metadata
</li>
<li>All of the IPs from these networks are using generic user agents like this, but MANY more, and they change many times:</li>
</ul>
<pre tabindex="0"><code>&quot;Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/50.0.2703.0 Safari/537.36&quot;
<pre tabindex="0"><code>&#34;Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/50.0.2703.0 Safari/537.36&#34;
</code></pre><ul>
<li>I found a <a href="https://www.qurium.org/alerts/azerbaijan/azerbaijan-and-the-region40-ddos-service/">blog post from 2018 detailing an attack from a DDoS service</a> that matches our pattern exactly</li>
<li>They specifically mention:</li>
@ -473,7 +473,7 @@ UPDATE metadatavalue SET text_lang='es_ES' WHERE resource_type_id=2 AND metadata
<ul>
<li>I see that the Unpaywall bot is resonsible for a few thousand XMLUI sessions every day (IP addresses come from nginx access.log):</li>
</ul>
<pre tabindex="0"><code>$ cat dspace.log.2019-05-11 | grep -E 'ip_addr=(100.26.206.188|100.27.19.233|107.22.98.199|174.129.156.41|18.205.243.110|18.205.245.200|18.207.176.164|18.207.209.186|18.212.126.89|18.212.5.59|18.213.4.150|18.232.120.6|18.234.180.224|18.234.81.13|3.208.23.222|34.201.121.183|34.201.241.214|34.201.39.122|34.203.188.39|34.207.197.154|34.207.232.63|34.207.91.147|34.224.86.47|34.227.205.181|34.228.220.218|34.229.223.120|35.171.160.166|35.175.175.202|3.80.201.39|3.81.120.70|3.81.43.53|3.84.152.19|3.85.113.253|3.85.237.139|3.85.56.100|3.87.23.95|3.87.248.240|3.87.250.3|3.87.62.129|3.88.13.9|3.88.57.237|3.89.71.15|3.90.17.242|3.90.68.247|3.91.44.91|3.92.138.47|3.94.250.180|52.200.78.128|52.201.223.200|52.90.114.186|52.90.48.73|54.145.91.243|54.160.246.228|54.165.66.180|54.166.219.216|54.166.238.172|54.167.89.152|54.174.94.223|54.196.18.211|54.198.234.175|54.208.8.172|54.224.146.147|54.234.169.91|54.235.29.216|54.237.196.147|54.242.68.231|54.82.6.96|54.87.12.181|54.89.217.141|54.89.234.182|54.90.81.216|54.91.104.162)' | grep -E 'session_id=[A-Z0-9]{32}' | sort | uniq | wc -l
<pre tabindex="0"><code>$ cat dspace.log.2019-05-11 | grep -E &#39;ip_addr=(100.26.206.188|100.27.19.233|107.22.98.199|174.129.156.41|18.205.243.110|18.205.245.200|18.207.176.164|18.207.209.186|18.212.126.89|18.212.5.59|18.213.4.150|18.232.120.6|18.234.180.224|18.234.81.13|3.208.23.222|34.201.121.183|34.201.241.214|34.201.39.122|34.203.188.39|34.207.197.154|34.207.232.63|34.207.91.147|34.224.86.47|34.227.205.181|34.228.220.218|34.229.223.120|35.171.160.166|35.175.175.202|3.80.201.39|3.81.120.70|3.81.43.53|3.84.152.19|3.85.113.253|3.85.237.139|3.85.56.100|3.87.23.95|3.87.248.240|3.87.250.3|3.87.62.129|3.88.13.9|3.88.57.237|3.89.71.15|3.90.17.242|3.90.68.247|3.91.44.91|3.92.138.47|3.94.250.180|52.200.78.128|52.201.223.200|52.90.114.186|52.90.48.73|54.145.91.243|54.160.246.228|54.165.66.180|54.166.219.216|54.166.238.172|54.167.89.152|54.174.94.223|54.196.18.211|54.198.234.175|54.208.8.172|54.224.146.147|54.234.169.91|54.235.29.216|54.237.196.147|54.242.68.231|54.82.6.96|54.87.12.181|54.89.217.141|54.89.234.182|54.90.81.216|54.91.104.162)&#39; | grep -E &#39;session_id=[A-Z0-9]{32}&#39; | sort | uniq | wc -l
2206
</code></pre><ul>
<li>I added &ldquo;Unpaywall&rdquo; to the list of bots in the Tomcat Crawler Session Manager Valve</li>
@ -519,20 +519,20 @@ COPY 995
<li>Peter sent me a bunch of fixes for investors from yesterday</li>
<li>I did a quick check in Open Refine (trim and collapse whitespace, clean smart quotes, etc) and then applied them on CGSpace:</li>
</ul>
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-16-fix-306-Investors.csv -db dspace-u dspace-p 'fuuu' -f dc.description.sponsorship -m 29 -t correct -d
$ ./delete-metadata-values.py -i /tmp/2019-05-16-delete-297-Investors.csv -db dspace -u dspace -p 'fuuu' -m 29 -f dc.description.sponsorship -d
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-16-fix-306-Investors.csv -db dspace-u dspace-p &#39;fuuu&#39; -f dc.description.sponsorship -m 29 -t correct -d
$ ./delete-metadata-values.py -i /tmp/2019-05-16-delete-297-Investors.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 29 -f dc.description.sponsorship -d
</code></pre><ul>
<li>Then I started a full Discovery re-indexing:</li>
</ul>
<pre tabindex="0"><code>$ export JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx1024m&quot;
<pre tabindex="0"><code>$ export JAVA_OPTS=&#34;-Dfile.encoding=UTF-8 -Xmx1024m&#34;
$ time schedtool -B -e ionice -c2 -n7 nice -n19 dspace index-discovery -b
</code></pre><ul>
<li>I was going to make a new controlled vocabulary of the top 100 terms after these corrections, but I noticed a bunch of duplicates and variations when I sorted them alphabetically</li>
<li>Instead, I exported a new list and asked Peter to look at it again</li>
<li>Apply Peter&rsquo;s new corrections on DSpace Test and CGSpace:</li>
</ul>
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-17-fix-25-Investors.csv -db dspace -u dspace -p 'fuuu' -f dc.description.sponsorship -m 29 -t correct -d
$ ./delete-metadata-values.py -i /tmp/2019-05-17-delete-14-Investors.csv -db dspace -u dspace -p 'fuuu' -m 29 -f dc.description.sponsorship -d
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-17-fix-25-Investors.csv -db dspace -u dspace -p &#39;fuuu&#39; -f dc.description.sponsorship -m 29 -t correct -d
$ ./delete-metadata-values.py -i /tmp/2019-05-17-delete-14-Investors.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 29 -f dc.description.sponsorship -d
</code></pre><ul>
<li>Then I re-exported the sponsors and took the top 100 to update the existing controlled vocabulary (<a href="https://github.com/ilri/DSpace/pull/423">#423</a>)
<ul>
@ -573,16 +573,16 @@ $ ./delete-metadata-values.py -i /tmp/2019-05-17-delete-14-Investors.csv -db dsp
</ul>
</li>
</ul>
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-27-fix-2472-Authors.csv -db dspace -u dspace -p 'fuuu' -f dc.contributor.author -m 3 -t corrections -d
<pre tabindex="0"><code>$ ./fix-metadata-values.py -i /tmp/2019-05-27-fix-2472-Authors.csv -db dspace -u dspace -p &#39;fuuu&#39; -f dc.contributor.author -m 3 -t corrections -d
</code></pre><ul>
<li>Then start a full Discovery re-indexing on each server:</li>
</ul>
<pre tabindex="0"><code>$ export JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx1024m&quot;
<pre tabindex="0"><code>$ export JAVA_OPTS=&#34;-Dfile.encoding=UTF-8 -Xmx1024m&#34;
$ time schedtool -B -e ionice -c2 -n7 nice -n19 dspace index-discovery -b
</code></pre><ul>
<li>Export new list of all authors from CGSpace database to send to Peter:</li>
</ul>
<pre tabindex="0"><code>dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = 'contributor' and qualifier = 'author') AND resource_type_id = 2 group by text_value order by count desc) to /tmp/2019-05-27-all-authors.csv with csv header;
<pre tabindex="0"><code>dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = &#39;contributor&#39; and qualifier = &#39;author&#39;) AND resource_type_id = 2 group by text_value order by count desc) to /tmp/2019-05-27-all-authors.csv with csv header;
COPY 64871
</code></pre><ul>
<li>Run all system updates on DSpace Test (linode19) and reboot it</li>
@ -609,7 +609,7 @@ COPY 64871
</code></pre><ul>
<li>For now I just created an eperson with her personal email address until I have time to check LDAP to see what&rsquo;s up with her CGIAR account:</li>
</ul>
<pre tabindex="0"><code>$ dspace user -a -m blah@blah.com -g Sakshi -s Saini -p 'sknflksnfksnfdls'
<pre tabindex="0"><code>$ dspace user -a -m blah@blah.com -g Sakshi -s Saini -p &#39;sknflksnfksnfdls&#39;
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