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Alan Orth 2019-10-28 13:43:25 +02:00
parent 611b5c7ef8
commit 20539a394a
Signed by: alanorth
GPG Key ID: 0FB860CC9C45B1B9
84 changed files with 2536 additions and 3216 deletions
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4
docs/2015-11/index.html
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@ -280,6 +280,8 @@ db.statementpool = true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -288,8 +290,6 @@ db.statementpool = true
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2015-12/index.html
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@ -296,6 +296,8 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -304,8 +306,6 @@ $ curl -o /dev/null -s -w %{time_total}\\n https://cgspace.cgiar.org/rest/handle
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-01/index.html
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@ -212,6 +212,8 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -220,8 +222,6 @@ $ find SimpleArchiveForBio/ -iname &ldquo;*.pdf&rdquo; -exec basename {} \; | so
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-02/index.html
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@ -457,6 +457,8 @@ Bitstream: tést señora alimentación.pdf
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -465,8 +467,6 @@ Bitstream: tést señora alimentación.pdf
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-03/index.html
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@ -363,6 +363,8 @@ metadata_value_id | resource_id | metadata_field_id | text_value | text_lang | p
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -371,8 +373,6 @@ metadata_value_id | resource_id | metadata_field_id | text_value | text_lang | p
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-04/index.html
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@ -579,6 +579,8 @@ dspace.log.2016-04-27:7271
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -587,8 +589,6 @@ dspace.log.2016-04-27:7271
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-05/index.html
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@ -437,6 +437,8 @@ sys 0m20.540s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -445,8 +447,6 @@ sys 0m20.540s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-06/index.html
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@ -472,6 +472,8 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -480,8 +482,6 @@ $ ./delete-metadata-values.py -f dc.contributor.corporate -i Corporate-Authors-D
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-07/index.html
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@ -383,6 +383,8 @@ discovery.index.authority.ignore-variants=true
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -391,8 +393,6 @@ discovery.index.authority.ignore-variants=true
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-08/index.html
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@ -462,6 +462,8 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -470,8 +472,6 @@ $ JAVA_OPTS=&quot;-Dfile.encoding=UTF-8 -Xmx512m&quot; /home/cgspace.cgiar.org/b
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-09/index.html
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@ -736,6 +736,8 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -744,8 +746,6 @@ $ ./delete-metadata-values.py -i ilrisubjects-delete-13.csv -f cg.subject.ilri -
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-10/index.html
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@ -441,6 +441,8 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -449,8 +451,6 @@ dspace=# update metadatavalue set text_value = regexp_replace(text_value, 'http:
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-11/index.html
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@ -642,6 +642,8 @@ org.dspace.discovery.SearchServiceException: Error executing query
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -650,8 +652,6 @@ org.dspace.discovery.SearchServiceException: Error executing query
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2016-12/index.html
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@ -909,6 +909,8 @@ $ exit
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -917,8 +919,6 @@ $ exit
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-01/index.html
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@ -434,6 +434,8 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -442,8 +444,6 @@ $ gs -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/ebook -dNOPAUSE -
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-02/index.html
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@ -499,6 +499,8 @@ COPY 1968
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -507,8 +509,6 @@ COPY 1968
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-03/index.html
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@ -436,6 +436,8 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -444,8 +446,6 @@ $ ./delete-metadata-values.py -i Investors-Delete-121.csv -f dc.description.spon
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-04/index.html
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@ -704,6 +704,8 @@ $ gem install compass -v 1.0.3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -712,8 +714,6 @@ $ gem install compass -v 1.0.3
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-05/index.html
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@ -464,6 +464,8 @@ UPDATE 187
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -472,8 +474,6 @@ UPDATE 187
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-06/index.html
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@ -297,6 +297,8 @@ text_value
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -305,8 +307,6 @@ text_value
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-07/index.html
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@ -317,6 +317,8 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -325,8 +327,6 @@ delete from metadatavalue where resource_type_id=2 and metadata_field_id=235 and
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-08/index.html
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@ -613,6 +613,8 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -621,8 +623,6 @@ org.apache.commons.dbcp.SQLNestedException: Cannot get a connection, pool error
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/2017-09/index.html
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@ -783,6 +783,8 @@ Cert Status: good
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -791,8 +793,6 @@ Cert Status: good
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2017-10/index.html
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@ -21,7 +21,7 @@ Add Katherine Lutz to the groups for content submission and edit steps of the CG
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-10/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-10/" />
<meta property="article:published_time" content="2017-10-01T08:07:54+03:00" /> <meta property="article:published_time" content="2017-10-01T08:07:54+03:00" />
<meta property="article:modified_time" content="2018-03-09T22:10:33+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="October, 2017"/> <meta name="twitter:title" content="October, 2017"/>
@ -49,7 +49,7 @@ Add Katherine Lutz to the groups for content submission and edit steps of the CG
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-10\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-10\/",
"wordCount": "2613", "wordCount": "2613",
"datePublished": "2017-10-01T08:07:54+03:00", "datePublished": "2017-10-01T08:07:54+03:00",
"dateModified": "2018-03-09T22:10:33+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -113,8 +113,8 @@ Add Katherine Lutz to the groups for content submission and edit steps of the CG
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -549,6 +549,8 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -557,8 +559,6 @@ session_id=6C30F10B4351A4ED83EC6ED50AFD6B6A
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2017-11/index.html
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@ -30,7 +30,7 @@ COPY 54701
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-11/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-11/" />
<meta property="article:published_time" content="2017-11-02T09:37:54+02:00" /> <meta property="article:published_time" content="2017-11-02T09:37:54+02:00" />
<meta property="article:modified_time" content="2018-04-10T08:27:55+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="November, 2017"/> <meta name="twitter:title" content="November, 2017"/>
@ -67,7 +67,7 @@ COPY 54701
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-11\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-11\/",
"wordCount": "5428", "wordCount": "5428",
"datePublished": "2017-11-02T09:37:54+02:00", "datePublished": "2017-11-02T09:37:54+02:00",
"dateModified": "2018-04-10T08:27:55+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -131,8 +131,8 @@ COPY 54701
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1159,6 +1159,8 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1167,8 +1169,6 @@ $ cat dspace.log.2017-11-28 | grep -o -E 'session_id=[A-Z0-9]{32}' | sort -n | u
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2017-12/index.html
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@ -17,7 +17,7 @@ The list of connections to XMLUI and REST API for today:
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-12/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2017-12/" />
<meta property="article:published_time" content="2017-12-01T13:53:54+03:00" /> <meta property="article:published_time" content="2017-12-01T13:53:54+03:00" />
<meta property="article:modified_time" content="2018-03-09T22:10:33+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="December, 2017"/> <meta name="twitter:title" content="December, 2017"/>
@ -41,7 +41,7 @@ The list of connections to XMLUI and REST API for today:
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-12\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2017-12\/",
"wordCount": "4088", "wordCount": "4088",
"datePublished": "2017-12-01T13:53:54+03:00", "datePublished": "2017-12-01T13:53:54+03:00",
"dateModified": "2018-03-09T22:10:33+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -105,8 +105,8 @@ The list of connections to XMLUI and REST API for today:
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -940,6 +940,8 @@ DELETE 20
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -948,8 +950,6 @@ DELETE 20
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-01/index.html
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@ -84,7 +84,7 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-01/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-01/" />
<meta property="article:published_time" content="2018-01-02T08:35:54-08:00" /> <meta property="article:published_time" content="2018-01-02T08:35:54-08:00" />
<meta property="article:modified_time" content="2018-03-28T09:48:08+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="January, 2018"/> <meta name="twitter:title" content="January, 2018"/>
@ -175,7 +175,7 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-01\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-01\/",
"wordCount": "7940", "wordCount": "7940",
"datePublished": "2018-01-02T08:35:54-08:00", "datePublished": "2018-01-02T08:35:54-08:00",
"dateModified": "2018-03-28T09:48:08+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -239,8 +239,8 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1734,6 +1734,8 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1742,8 +1744,6 @@ Catalina:type=Manager,context=/,host=localhost activeSessions 8
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-02/index.html
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@ -17,7 +17,7 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-02/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-02/" />
<meta property="article:published_time" content="2018-02-01T16:28:54+02:00" /> <meta property="article:published_time" content="2018-02-01T16:28:54+02:00" />
<meta property="article:modified_time" content="2018-08-19T18:42:55+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="February, 2018"/> <meta name="twitter:title" content="February, 2018"/>
@ -41,7 +41,7 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-02\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-02\/",
"wordCount": "6410", "wordCount": "6410",
"datePublished": "2018-02-01T16:28:54+02:00", "datePublished": "2018-02-01T16:28:54+02:00",
"dateModified": "2018-08-19T18:42:55+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -105,8 +105,8 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1288,6 +1288,8 @@ UPDATE 3
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1296,8 +1298,6 @@ UPDATE 3
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-03/index.html
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@ -14,7 +14,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-03/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-03/" />
<meta property="article:published_time" content="2018-03-02T16:07:54+02:00" /> <meta property="article:published_time" content="2018-03-02T16:07:54+02:00" />
<meta property="article:modified_time" content="2019-04-26T12:13:02+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="March, 2018"/> <meta name="twitter:title" content="March, 2018"/>
@ -35,7 +35,7 @@ Export a CSV of the IITA community metadata for Martin Mueller
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-03\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-03\/",
"wordCount": "2960", "wordCount": "2960",
"datePublished": "2018-03-02T16:07:54+02:00", "datePublished": "2018-03-02T16:07:54+02:00",
"dateModified": "2019-04-26T12:13:02+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -99,8 +99,8 @@ Export a CSV of the IITA community metadata for Martin Mueller
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -714,6 +714,8 @@ Fixed 5 occurences of: GENEBANKS
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -722,8 +724,6 @@ Fixed 5 occurences of: GENEBANKS
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-04/index.html
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@ -15,7 +15,7 @@ Catalina logs at least show some memory errors yesterday:
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-04/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-04/" />
<meta property="article:published_time" content="2018-04-01T16:13:54+02:00" /> <meta property="article:published_time" content="2018-04-01T16:13:54+02:00" />
<meta property="article:modified_time" content="2018-04-30T18:45:30+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="April, 2018"/> <meta name="twitter:title" content="April, 2018"/>
@ -37,7 +37,7 @@ Catalina logs at least show some memory errors yesterday:
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-04\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-04\/",
"wordCount": "3016", "wordCount": "3016",
"datePublished": "2018-04-01T16:13:54+02:00", "datePublished": "2018-04-01T16:13:54+02:00",
"dateModified": "2018-04-30T18:45:30+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -101,8 +101,8 @@ Catalina logs at least show some memory errors yesterday:
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -722,6 +722,8 @@ java.lang.NoSuchMethodError: java.nio.ByteBuffer.position(I)Ljava/nio/ByteBuffer
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -730,8 +732,6 @@ java.lang.NoSuchMethodError: java.nio.ByteBuffer.position(I)Ljava/nio/ByteBuffer
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-05/index.html
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@ -21,7 +21,7 @@ Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-05/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-05/" />
<meta property="article:published_time" content="2018-05-01T16:43:54+03:00" /> <meta property="article:published_time" content="2018-05-01T16:43:54+03:00" />
<meta property="article:modified_time" content="2018-09-04T16:15:26+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="May, 2018"/> <meta name="twitter:title" content="May, 2018"/>
@ -49,7 +49,7 @@ Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-05\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-05\/",
"wordCount": "3503", "wordCount": "3503",
"datePublished": "2018-05-01T16:43:54+03:00", "datePublished": "2018-05-01T16:43:54+03:00",
"dateModified": "2018-09-04T16:15:26+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -113,8 +113,8 @@ Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -617,6 +617,8 @@ $ psql -h localhost -U postgres dspacetest
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -625,8 +627,6 @@ $ psql -h localhost -U postgres dspacetest
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-06/index.html
View File

@ -35,7 +35,7 @@ sys 2m7.289s
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-06/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-06/" />
<meta property="article:published_time" content="2018-06-04T19:49:54-07:00" /> <meta property="article:published_time" content="2018-06-04T19:49:54-07:00" />
<meta property="article:modified_time" content="2018-06-28T13:37:35+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="June, 2018"/> <meta name="twitter:title" content="June, 2018"/>
@ -77,7 +77,7 @@ sys 2m7.289s
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-06\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-06\/",
"wordCount": "2894", "wordCount": "2894",
"datePublished": "2018-06-04T19:49:54-07:00", "datePublished": "2018-06-04T19:49:54-07:00",
"dateModified": "2018-06-28T13:37:35+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -141,8 +141,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -585,6 +585,8 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -593,8 +595,6 @@ $ sed '/^id/d' 10568-*.csv | csvcut -c 1,2 &gt; map-to-cifor-archive.csv
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-07/index.html
View File

@ -22,7 +22,7 @@ There is insufficient memory for the Java Runtime Environment to continue.
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-07/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-07/" />
<meta property="article:published_time" content="2018-07-01T12:56:54+03:00" /> <meta property="article:published_time" content="2018-07-01T12:56:54+03:00" />
<meta property="article:modified_time" content="2018-07-28T12:06:56+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="July, 2018"/> <meta name="twitter:title" content="July, 2018"/>
@ -51,7 +51,7 @@ There is insufficient memory for the Java Runtime Environment to continue.
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-07\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-07\/",
"wordCount": "3376", "wordCount": "3376",
"datePublished": "2018-07-01T12:56:54+03:00", "datePublished": "2018-07-01T12:56:54+03:00",
"dateModified": "2018-07-28T12:06:56+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -115,8 +115,8 @@ There is insufficient memory for the Java Runtime Environment to continue.
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -676,6 +676,8 @@ count
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -684,8 +686,6 @@ count
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-08/index.html
View File

@ -31,7 +31,7 @@ I ran all system updates on DSpace Test and rebooted it
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-08/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-08/" />
<meta property="article:published_time" content="2018-08-01T11:52:54+03:00" /> <meta property="article:published_time" content="2018-08-01T11:52:54+03:00" />
<meta property="article:modified_time" content="2018-09-10T23:35:46+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="August, 2018"/> <meta name="twitter:title" content="August, 2018"/>
@ -69,7 +69,7 @@ I ran all system updates on DSpace Test and rebooted it
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-08\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-08\/",
"wordCount": "2748", "wordCount": "2748",
"datePublished": "2018-08-01T11:52:54+03:00", "datePublished": "2018-08-01T11:52:54+03:00",
"dateModified": "2018-09-10T23:35:46+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -133,8 +133,8 @@ I ran all system updates on DSpace Test and rebooted it
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -549,6 +549,8 @@ $ dspace database migrate ignored
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -557,8 +559,6 @@ $ dspace database migrate ignored
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-09/index.html
View File

@ -17,7 +17,7 @@ I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-09/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-09/" />
<meta property="article:published_time" content="2018-09-02T09:55:54+03:00" /> <meta property="article:published_time" content="2018-09-02T09:55:54+03:00" />
<meta property="article:modified_time" content="2018-09-30T08:23:48+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="September, 2018"/> <meta name="twitter:title" content="September, 2018"/>
@ -41,7 +41,7 @@ I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-09\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-09\/",
"wordCount": "5245", "wordCount": "5245",
"datePublished": "2018-09-02T09:55:54+03:00", "datePublished": "2018-09-02T09:55:54+03:00",
"dateModified": "2018-09-30T08:23:48+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -105,8 +105,8 @@ I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -911,6 +911,8 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -919,8 +921,6 @@ UPDATE metadatavalue SET text_value='ja' WHERE resource_type_id=2 AND metadata_f
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-10/index.html
View File

@ -15,7 +15,7 @@ I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nai
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-10/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-10/" />
<meta property="article:published_time" content="2018-10-01T22:31:54+03:00" /> <meta property="article:published_time" content="2018-10-01T22:31:54+03:00" />
<meta property="article:modified_time" content="2018-11-01T16:42:20+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="October, 2018"/> <meta name="twitter:title" content="October, 2018"/>
@ -37,7 +37,7 @@ I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nai
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-10\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-10\/",
"wordCount": "4519", "wordCount": "4519",
"datePublished": "2018-10-01T22:31:54+03:00", "datePublished": "2018-10-01T22:31:54+03:00",
"dateModified": "2018-11-01T16:42:20+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -101,8 +101,8 @@ I created a GitHub issue to track this #389, because I&rsquo;m super busy in Nai
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -798,6 +798,8 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -806,8 +808,6 @@ $ curl -X GET -H &quot;Content-Type: application/json&quot; -H &quot;Accept: app
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-11/index.html
View File

@ -22,7 +22,7 @@ Today these are the top 10 IPs:
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-11/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-11/" />
<meta property="article:published_time" content="2018-11-01T16:41:30+02:00" /> <meta property="article:published_time" content="2018-11-01T16:41:30+02:00" />
<meta property="article:modified_time" content="2019-02-07T10:52:23+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="November, 2018"/> <meta name="twitter:title" content="November, 2018"/>
@ -51,7 +51,7 @@ Today these are the top 10 IPs:
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-11\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-11\/",
"wordCount": "2823", "wordCount": "2823",
"datePublished": "2018-11-01T16:41:30+02:00", "datePublished": "2018-11-01T16:41:30+02:00",
"dateModified": "2019-02-07T10:52:23+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -115,8 +115,8 @@ Today these are the top 10 IPs:
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -653,6 +653,8 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -661,8 +663,6 @@ $ dspace dsrun org.dspace.eperson.Groomer -a -b 11/27/2016 -d
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2018-12/index.html
View File

@ -22,7 +22,7 @@ I noticed that there is another issue with PDF thumbnails on CGSpace, and I see
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-12/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-12/" />
<meta property="article:published_time" content="2018-12-02T02:09:30+02:00" /> <meta property="article:published_time" content="2018-12-02T02:09:30+02:00" />
<meta property="article:modified_time" content="2018-12-30T18:12:18+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="December, 2018"/> <meta name="twitter:title" content="December, 2018"/>
@ -51,7 +51,7 @@ I noticed that there is another issue with PDF thumbnails on CGSpace, and I see
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-12\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2018-12\/",
"wordCount": "3096", "wordCount": "3096",
"datePublished": "2018-12-02T02:09:30+02:00", "datePublished": "2018-12-02T02:09:30+02:00",
"dateModified": "2018-12-30T18:12:18+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -115,8 +115,8 @@ I noticed that there is another issue with PDF thumbnails on CGSpace, and I see
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -686,6 +686,8 @@ UPDATE 1
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -694,8 +696,6 @@ UPDATE 1
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-01/index.html
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@ -29,7 +29,7 @@ I don&rsquo;t see anything interesting in the web server logs around that time t
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-01/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-01/" />
<meta property="article:published_time" content="2019-01-02T09:48:30+02:00" /> <meta property="article:published_time" content="2019-01-02T09:48:30+02:00" />
<meta property="article:modified_time" content="2019-02-01T21:45:50+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="January, 2019"/> <meta name="twitter:title" content="January, 2019"/>
@ -65,7 +65,7 @@ I don&rsquo;t see anything interesting in the web server logs around that time t
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-01\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-01\/",
"wordCount": "5532", "wordCount": "5532",
"datePublished": "2019-01-02T09:48:30+02:00", "datePublished": "2019-01-02T09:48:30+02:00",
"dateModified": "2019-02-01T21:45:50+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -129,8 +129,8 @@ I don&rsquo;t see anything interesting in the web server logs around that time t
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1399,6 +1399,8 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1407,8 +1409,6 @@ identify: CorruptImageProfile `xmp' @ warning/profile.c/SetImageProfileInternal/
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-02/index.html
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@ -43,7 +43,7 @@ sys 0m1.979s
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-02/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-02/" />
<meta property="article:published_time" content="2019-02-01T21:37:30+02:00" /> <meta property="article:published_time" content="2019-02-01T21:37:30+02:00" />
<meta property="article:modified_time" content="2019-03-18T15:25:49+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="February, 2019"/> <meta name="twitter:title" content="February, 2019"/>
@ -93,7 +93,7 @@ sys 0m1.979s
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-02\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-02\/",
"wordCount": "7700", "wordCount": "7700",
"datePublished": "2019-02-01T21:37:30+02:00", "datePublished": "2019-02-01T21:37:30+02:00",
"dateModified": "2019-03-18T15:25:49+02:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -157,8 +157,8 @@ sys 0m1.979s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1590,6 +1590,8 @@ Please see the DSpace documentation for assistance.
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1598,8 +1600,6 @@ Please see the DSpace documentation for assistance.
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-03/index.html
View File

@ -25,7 +25,7 @@ I think I will need to ask Udana to re-copy and paste the abstracts with more ca
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-03/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-03/" />
<meta property="article:published_time" content="2019-03-01T12:16:30+01:00" /> <meta property="article:published_time" content="2019-03-01T12:16:30+01:00" />
<meta property="article:modified_time" content="2019-07-12T14:05:21+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="March, 2019"/> <meta name="twitter:title" content="March, 2019"/>
@ -57,7 +57,7 @@ I think I will need to ask Udana to re-copy and paste the abstracts with more ca
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-03\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-03\/",
"wordCount": "7105", "wordCount": "7105",
"datePublished": "2019-03-01T12:16:30+01:00", "datePublished": "2019-03-01T12:16:30+01:00",
"dateModified": "2019-07-12T14:05:21+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -121,8 +121,8 @@ I think I will need to ask Udana to re-copy and paste the abstracts with more ca
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1382,6 +1382,8 @@ sys 0m2.551s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1390,8 +1392,6 @@ sys 0m2.551s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-04/index.html
View File

@ -38,7 +38,7 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-04/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-04/" />
<meta property="article:published_time" content="2019-04-01T09:00:43+03:00" /> <meta property="article:published_time" content="2019-04-01T09:00:43+03:00" />
<meta property="article:modified_time" content="2019-07-04T19:37:10+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="April, 2019"/> <meta name="twitter:title" content="April, 2019"/>
@ -83,7 +83,7 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-04\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-04\/",
"wordCount": "6799", "wordCount": "6799",
"datePublished": "2019-04-01T09:00:43+03:00", "datePublished": "2019-04-01T09:00:43+03:00",
"dateModified": "2019-07-04T19:37:10+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -147,8 +147,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -1441,6 +1441,8 @@ UPDATE 14
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -1449,8 +1451,6 @@ UPDATE 14
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-05/index.html
View File

@ -28,7 +28,7 @@ But after this I tried to delete the item from the XMLUI and it is still present
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-05/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-05/" />
<meta property="article:published_time" content="2019-05-01T07:37:43+03:00" /> <meta property="article:published_time" content="2019-05-01T07:37:43+03:00" />
<meta property="article:modified_time" content="2019-07-08T11:18:51+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="May, 2019"/> <meta name="twitter:title" content="May, 2019"/>
@ -63,7 +63,7 @@ But after this I tried to delete the item from the XMLUI and it is still present
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-05\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-05\/",
"wordCount": "3215", "wordCount": "3215",
"datePublished": "2019-05-01T07:37:43+03:00", "datePublished": "2019-05-01T07:37:43+03:00",
"dateModified": "2019-07-08T11:18:51+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -127,8 +127,8 @@ But after this I tried to delete the item from the XMLUI and it is still present
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -730,6 +730,8 @@ COPY 64871
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -738,8 +740,6 @@ COPY 64871
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-06/index.html
View File

@ -21,7 +21,7 @@ Skype with Marie-Angélique and Abenet about CG Core v2
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-06/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-06/" />
<meta property="article:published_time" content="2019-06-02T10:57:51+03:00" /> <meta property="article:published_time" content="2019-06-02T10:57:51+03:00" />
<meta property="article:modified_time" content="2019-07-01T12:14:35+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="June, 2019"/> <meta name="twitter:title" content="June, 2019"/>
@ -49,7 +49,7 @@ Skype with Marie-Angélique and Abenet about CG Core v2
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-06\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-06\/",
"wordCount": "1057", "wordCount": "1057",
"datePublished": "2019-06-02T10:57:51+03:00", "datePublished": "2019-06-02T10:57:51+03:00",
"dateModified": "2019-07-01T12:14:35+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -113,8 +113,8 @@ Skype with Marie-Angélique and Abenet about CG Core v2
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -343,6 +343,8 @@ UPDATE 2
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -351,8 +353,6 @@ UPDATE 2
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-07/index.html
View File

@ -21,7 +21,7 @@ Abenet had another similar issue a few days ago when trying to find the stats fo
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-07/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-07/" />
<meta property="article:published_time" content="2019-07-01T12:13:51+03:00" /> <meta property="article:published_time" content="2019-07-01T12:13:51+03:00" />
<meta property="article:modified_time" content="2019-07-30T20:15:21+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="July, 2019"/> <meta name="twitter:title" content="July, 2019"/>
@ -49,7 +49,7 @@ Abenet had another similar issue a few days ago when trying to find the stats fo
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-07\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-07\/",
"wordCount": "2330", "wordCount": "2330",
"datePublished": "2019-07-01T12:13:51+03:00", "datePublished": "2019-07-01T12:13:51+03:00",
"dateModified": "2019-07-30T20:15:21+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -113,8 +113,8 @@ Abenet had another similar issue a few days ago when trying to find the stats fo
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -626,6 +626,8 @@ issn.validate('1020-3362')
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -634,8 +636,6 @@ issn.validate('1020-3362')
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-08/index.html
View File

@ -27,7 +27,7 @@ Run system updates on DSpace Test (linode19) and reboot it
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-08/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-08/" />
<meta property="article:published_time" content="2019-08-03T12:39:51+03:00" /> <meta property="article:published_time" content="2019-08-03T12:39:51+03:00" />
<meta property="article:modified_time" content="2019-09-27T17:53:18+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="August, 2019"/> <meta name="twitter:title" content="August, 2019"/>
@ -61,7 +61,7 @@ Run system updates on DSpace Test (linode19) and reboot it
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-08\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-08\/",
"wordCount": "2703", "wordCount": "2703",
"datePublished": "2019-08-03T12:39:51+03:00", "datePublished": "2019-08-03T12:39:51+03:00",
"dateModified": "2019-09-27T17:53:18+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -125,8 +125,8 @@ Run system updates on DSpace Test (linode19) and reboot it
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -628,6 +628,8 @@ sys 2m27.496s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -636,8 +638,6 @@ sys 2m27.496s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-09/index.html
View File

@ -40,7 +40,7 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-09/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-09/" />
<meta property="article:published_time" content="2019-09-01T10:17:51+03:00" /> <meta property="article:published_time" content="2019-09-01T10:17:51+03:00" />
<meta property="article:modified_time" content="2019-09-27T17:53:18+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:39:25+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="September, 2019"/> <meta name="twitter:title" content="September, 2019"/>
@ -87,7 +87,7 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-09\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-09\/",
"wordCount": "2870", "wordCount": "2870",
"datePublished": "2019-09-01T10:17:51+03:00", "datePublished": "2019-09-01T10:17:51+03:00",
"dateModified": "2019-09-27T17:53:18+03:00", "dateModified": "2019-10-28T13:39:25+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -151,8 +151,8 @@ Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -636,6 +636,8 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -644,8 +646,6 @@ $ csv-metadata-quality -i /tmp/clarisa-institutions.csv -o /tmp/clarisa-institut
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
docs/2019-10/index.html
View File

@ -11,7 +11,7 @@
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-10/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2019-10/" />
<meta property="article:published_time" content="2019-10-01T13:20:51+03:00" /> <meta property="article:published_time" content="2019-10-01T13:20:51+03:00" />
<meta property="article:modified_time" content="2019-10-21T22:09:15+03:00" /> <meta property="article:modified_time" content="2019-10-28T13:41:08+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="October, 2019"/> <meta name="twitter:title" content="October, 2019"/>
@ -29,7 +29,7 @@
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-10\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/2019-10\/",
"wordCount": "1535", "wordCount": "1535",
"datePublished": "2019-10-01T13:20:51+03:00", "datePublished": "2019-10-01T13:20:51+03:00",
"dateModified": "2019-10-21T22:09:15+03:00", "dateModified": "2019-10-28T13:41:08+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
@ -93,8 +93,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -406,6 +406,8 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -414,8 +416,6 @@ $ dspace import -a -c 10568/104057 -e fuu@cgiar.org -m 2019-10-15-Bioversity.map
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
docs/404.html
View File

@ -89,6 +89,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -97,8 +99,6 @@
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

87
docs/categories/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-09-18T16:38:35+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-28T13:27:35&#43;02:00">Mon Oct 28, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p>
</header>
<p>Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.</p>
<p>With reference to <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2 draft standard</a> by Marie-Angélique as well as <a href="http://www.dublincore.org/specifications/dublin-core/dcmi-terms/">DCMI DCTERMS</a>.</p>
<a href='https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -114,8 +136,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -162,8 +184,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -197,8 +219,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -226,8 +248,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -255,8 +277,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -291,8 +313,8 @@ DELETE 1
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -337,8 +359,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -370,8 +392,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -416,43 +438,6 @@ sys 0m1.979s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +462,8 @@ sys 0m1.979s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -485,8 +472,6 @@ sys 0m1.979s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

4
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@ -6,7 +6,7 @@
<description>Recent content in Categories on CGSpace Notes</description> <description>Recent content in Categories on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Mon, 18 Sep 2017 16:38:35 +0300</lastBuildDate> <lastBuildDate>Mon, 28 Oct 2019 13:27:35 +0200</lastBuildDate>
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@ -14,7 +14,7 @@
<item> <item>
<title>Notes</title> <title>Notes</title>
<link>https://alanorth.github.io/cgspace-notes/categories/notes/</link> <link>https://alanorth.github.io/cgspace-notes/categories/notes/</link>
<pubDate>Mon, 18 Sep 2017 16:38:35 +0300</pubDate> <pubDate>Mon, 28 Oct 2019 13:27:35 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid> <guid>https://alanorth.github.io/cgspace-notes/categories/notes/</guid>
<description></description> <description></description>

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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/notes/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -78,15 +78,38 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgiar-library-migration/">CGIAR Library Migration</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></h2>
<p class="blog-post-meta"><time datetime="2017-09-18T16:38:35&#43;03:00">Mon Sep 18, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-28T13:27:35&#43;02:00">Mon Oct 28, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p>
</header>
<p>Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.</p>
<p>With reference to <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2 draft standard</a> by Marie-Angélique as well as <a href="http://www.dublincore.org/specifications/dublin-core/dcmi-terms/">DCMI DCTERMS</a>.</p>
<a href='https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> 2019-10-01 Udana from IWMI asked me for a CSV export of their community on CGSpace
<a href='https://alanorth.github.io/cgspace-notes/cgiar-library-migration/'>Read more →</a> I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:
<a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a>
</article> </article>
@ -94,6 +117,323 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-09-01">2019-09-01</h2>
<ul>
<li>Linode emailed to say that CGSpace (linode18) had a high rate of outbound traffic for several hours this morning</li>
<li><p>Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:</p>
<pre><code># zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &quot;01/Sep/2019:0&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
440 17.58.101.255
441 157.55.39.101
485 207.46.13.43
728 169.60.128.125
730 207.46.13.108
758 157.55.39.9
808 66.160.140.179
814 207.46.13.212
2472 163.172.71.23
6092 3.94.211.189
# zcat --force /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E &quot;01/Sep/2019:0&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
33 2a01:7e00::f03c:91ff:fe16:fcb
57 3.83.192.124
57 3.87.77.25
57 54.82.1.8
822 2a01:9cc0:47:1:1a:4:0:2
1223 45.5.184.72
1633 172.104.229.92
5112 205.186.128.185
7249 2a01:7e00::f03c:91ff:fe18:7396
9124 45.5.186.2
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-09/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-08-03">2019-08-03</h2>
<ul>
<li>Look at Bioversity&rsquo;s latest migration CSV and now I see that Francesco has cleaned up the extra columns and the newline at the end of the file, but many of the column headers have an extra space in the name&hellip;</li>
</ul>
<h2 id="2019-08-04">2019-08-04</h2>
<ul>
<li>Deploy ORCID identifier updates requested by Bioversity to CGSpace</li>
<li>Run system updates on CGSpace (linode18) and reboot it
<ul>
<li>Before updating it I checked Solr and verified that all statistics cores were loaded properly&hellip;</li>
<li>After rebooting, all statistics cores were loaded&hellip; wow, that&rsquo;s lucky.</li>
</ul></li>
<li>Run system updates on DSpace Test (linode19) and reboot it</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-08/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-07-01">2019-07-01</h2>
<ul>
<li>Create an &ldquo;AfricaRice books and book chapters&rdquo; collection on CGSpace for AfricaRice</li>
<li>Last month Sisay asked why the following &ldquo;most popular&rdquo; statistics link for a range of months in 2018 works for the CIAT community on DSpace Test, but not on CGSpace:
<ul>
<li><a href="https://dspacetest.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;time_filter_end_date=01%2F12%2F2018">DSpace Test</a></li>
<li><a href="https://cgspace.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;time_filter_end_date=01%2F12%2F2018">CGSpace</a></li>
</ul></li>
<li>Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-07/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-06-02">2019-06-02</h2>
<ul>
<li>Merge the <a href="https://github.com/ilri/DSpace/pull/425">Solr filterCache</a> and <a href="https://github.com/ilri/DSpace/pull/426">XMLUI ISI journal</a> changes to the <code>5_x-prod</code> branch and deploy on CGSpace</li>
<li>Run system updates on CGSpace (linode18) and reboot it</li>
</ul>
<h2 id="2019-06-03">2019-06-03</h2>
<ul>
<li>Skype with Marie-Angélique and Abenet about <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2</a></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-05-01">2019-05-01</h2>
<ul>
<li>Help CCAFS with regenerating some item thumbnails after they uploaded new PDFs to some items on CGSpace</li>
<li>A user on the dspace-tech mailing list offered some suggestions for troubleshooting the problem with the inability to delete certain items
<ul>
<li>Apparently if the item is in the <code>workflowitem</code> table it is submitted to a workflow</li>
<li>And if it is in the <code>workspaceitem</code> table it is in the pre-submitted state</li>
</ul></li>
<li><p>The item seems to be in a pre-submitted state, so I tried to delete it from there:</p>
<pre><code>dspace=# DELETE FROM workspaceitem WHERE item_id=74648;
DELETE 1
</code></pre></li>
<li><p>But after this I tried to delete the item from the XMLUI and it is <em>still</em> present&hellip;</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-04-01">2019-04-01</h2>
<ul>
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
<ul>
<li>They asked if we had plans to enable RDF support in CGSpace</li>
</ul></li>
<li><p>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today</p>
<ul>
<li><p>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</p>
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
4432 200
</code></pre></li>
</ul></li>
<li><p>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</p></li>
<li><p>Apply country and region corrections and deletions on DSpace Test and CGSpace:</p>
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-03-01">2019-03-01</h2>
<ul>
<li>I checked IITA&rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li>
<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
<li>Looking at the other half of Udana&rsquo;s WLE records from 2018-11
<ul>
<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
<li>2003<EFBFBD>2013 instead of 2003–2013</li>
</ul></li>
<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-02-01">2019-02-01</h2>
<ul>
<li>Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!</li>
<li><p>The top IPs before, during, and after this latest alert tonight were:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;01/Feb/2019:(17|18|19|20|21)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
245 207.46.13.5
332 54.70.40.11
385 5.143.231.38
405 207.46.13.173
405 207.46.13.75
1117 66.249.66.219
1121 35.237.175.180
1546 5.9.6.51
2474 45.5.186.2
5490 85.25.237.71
</code></pre></li>
<li><p><code>85.25.237.71</code> is the &ldquo;Linguee Bot&rdquo; that I first saw last month</p></li>
<li><p>The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase</p></li>
<li><p>There were just over 3 million accesses in the nginx logs last month:</p>
<pre><code># time zcat --force /var/log/nginx/* | grep -cE &quot;[0-9]{1,2}/Jan/2019&quot;
3018243
real 0m19.873s
user 0m22.203s
sys 0m1.979s
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-02/'>Read more →</a>
</article>
<nav class="blog-pagination">
<a class="btn btn-outline-primary disabled" href="#" role="button" aria-disabled="true">Previous page</a>
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@ -107,6 +447,8 @@
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -115,8 +457,6 @@
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

654
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@ -6,11 +6,663 @@
<description>Recent content in Notes on CGSpace Notes</description> <description>Recent content in Notes on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
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<atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/categories/notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>CGSpace CG Core v2 Migration</title>
<link>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</link>
<pubDate>Mon, 28 Oct 2019 13:27:35 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</guid>
<description>&lt;p&gt;Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.&lt;/p&gt;
&lt;p&gt;With reference to &lt;a href=&#34;https://agriculturalsemantics.github.io/cg-core/cgcore.html&#34;&gt;CG Core v2 draft standard&lt;/a&gt; by Marie-Angélique as well as &lt;a href=&#34;http://www.dublincore.org/specifications/dublin-core/dcmi-terms/&#34;&gt;DCMI DCTERMS&lt;/a&gt;.&lt;/p&gt;</description>
</item>
<item>
<title>October, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-10/</link>
<pubDate>Tue, 01 Oct 2019 13:20:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-10/</guid>
<description>2019-10-01 Udana from IWMI asked me for a CSV export of their community on CGSpace
I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&amp;rsquo;s &amp;ldquo;unneccesary Unicode&amp;rdquo; fix:</description>
</item>
<item>
<title>September, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-09/</link>
<pubDate>Sun, 01 Sep 2019 10:17:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-09/</guid>
<description>&lt;h2 id=&#34;2019-09-01&#34;&gt;2019-09-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode emailed to say that CGSpace (linode18) had a high rate of outbound traffic for several hours this morning&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &amp;quot;01/Sep/2019:0&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
440 17.58.101.255
441 157.55.39.101
485 207.46.13.43
728 169.60.128.125
730 207.46.13.108
758 157.55.39.9
808 66.160.140.179
814 207.46.13.212
2472 163.172.71.23
6092 3.94.211.189
# zcat --force /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E &amp;quot;01/Sep/2019:0&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
33 2a01:7e00::f03c:91ff:fe16:fcb
57 3.83.192.124
57 3.87.77.25
57 54.82.1.8
822 2a01:9cc0:47:1:1a:4:0:2
1223 45.5.184.72
1633 172.104.229.92
5112 205.186.128.185
7249 2a01:7e00::f03c:91ff:fe18:7396
9124 45.5.186.2
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>August, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-08/</link>
<pubDate>Sat, 03 Aug 2019 12:39:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-08/</guid>
<description>&lt;h2 id=&#34;2019-08-03&#34;&gt;2019-08-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Look at Bioversity&amp;rsquo;s latest migration CSV and now I see that Francesco has cleaned up the extra columns and the newline at the end of the file, but many of the column headers have an extra space in the name&amp;hellip;&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2019-08-04&#34;&gt;2019-08-04&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Deploy ORCID identifier updates requested by Bioversity to CGSpace&lt;/li&gt;
&lt;li&gt;Run system updates on CGSpace (linode18) and reboot it
&lt;ul&gt;
&lt;li&gt;Before updating it I checked Solr and verified that all statistics cores were loaded properly&amp;hellip;&lt;/li&gt;
&lt;li&gt;After rebooting, all statistics cores were loaded&amp;hellip; wow, that&amp;rsquo;s lucky.&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Run system updates on DSpace Test (linode19) and reboot it&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>July, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-07/</link>
<pubDate>Mon, 01 Jul 2019 12:13:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-07/</guid>
<description>&lt;h2 id=&#34;2019-07-01&#34;&gt;2019-07-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Create an &amp;ldquo;AfricaRice books and book chapters&amp;rdquo; collection on CGSpace for AfricaRice&lt;/li&gt;
&lt;li&gt;Last month Sisay asked why the following &amp;ldquo;most popular&amp;rdquo; statistics link for a range of months in 2018 works for the CIAT community on DSpace Test, but not on CGSpace:
&lt;ul&gt;
&lt;li&gt;&lt;a href=&#34;https://dspacetest.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;amp;time_filter_end_date=01%2F12%2F2018&#34;&gt;DSpace Test&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;&lt;a href=&#34;https://cgspace.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;amp;time_filter_end_date=01%2F12%2F2018&#34;&gt;CGSpace&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>June, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-06/</link>
<pubDate>Sun, 02 Jun 2019 10:57:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-06/</guid>
<description>&lt;h2 id=&#34;2019-06-02&#34;&gt;2019-06-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Merge the &lt;a href=&#34;https://github.com/ilri/DSpace/pull/425&#34;&gt;Solr filterCache&lt;/a&gt; and &lt;a href=&#34;https://github.com/ilri/DSpace/pull/426&#34;&gt;XMLUI ISI journal&lt;/a&gt; changes to the &lt;code&gt;5_x-prod&lt;/code&gt; branch and deploy on CGSpace&lt;/li&gt;
&lt;li&gt;Run system updates on CGSpace (linode18) and reboot it&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2019-06-03&#34;&gt;2019-06-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Skype with Marie-Angélique and Abenet about &lt;a href=&#34;https://agriculturalsemantics.github.io/cg-core/cgcore.html&#34;&gt;CG Core v2&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>May, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-05/</link>
<pubDate>Wed, 01 May 2019 07:37:43 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-05/</guid>
<description>&lt;h2 id=&#34;2019-05-01&#34;&gt;2019-05-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Help CCAFS with regenerating some item thumbnails after they uploaded new PDFs to some items on CGSpace&lt;/li&gt;
&lt;li&gt;A user on the dspace-tech mailing list offered some suggestions for troubleshooting the problem with the inability to delete certain items
&lt;ul&gt;
&lt;li&gt;Apparently if the item is in the &lt;code&gt;workflowitem&lt;/code&gt; table it is submitted to a workflow&lt;/li&gt;
&lt;li&gt;And if it is in the &lt;code&gt;workspaceitem&lt;/code&gt; table it is in the pre-submitted state&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The item seems to be in a pre-submitted state, so I tried to delete it from there:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;dspace=# DELETE FROM workspaceitem WHERE item_id=74648;
DELETE 1
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;But after this I tried to delete the item from the XMLUI and it is &lt;em&gt;still&lt;/em&gt; present&amp;hellip;&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-04/</link>
<pubDate>Mon, 01 Apr 2019 09:00:43 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-04/</guid>
<description>&lt;h2 id=&#34;2019-04-01&#34;&gt;2019-04-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
&lt;ul&gt;
&lt;li&gt;They asked if we had plans to enable RDF support in CGSpace&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep &#39;Spore-192-EN-web.pdf&#39; | grep -E &#39;(18.196.196.108|18.195.78.144|18.195.218.6)&#39; | awk &#39;{print $9}&#39; | sort | uniq -c | sort -n | tail -n 5
4432 200
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;In the last two weeks there have been 47,000 downloads of this &lt;em&gt;same exact PDF&lt;/em&gt; by these three IP addresses&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Apply country and region corrections and deletions on DSpace Test and CGSpace:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p &#39;fuuu&#39; -f cg.coverage.country -m 228 -t ACTION -d
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p &#39;fuuu&#39; -f cg.coverage.region -m 231 -t action -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 228 -f cg.coverage.country -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 231 -f cg.coverage.region -d
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>March, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-03/</link>
<pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-03/</guid>
<description>&lt;h2 id=&#34;2019-03-01&#34;&gt;2019-03-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I checked IITA&amp;rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&amp;rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good&lt;/li&gt;
&lt;li&gt;I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&amp;hellip;&lt;/li&gt;
&lt;li&gt;Looking at the other half of Udana&amp;rsquo;s WLE records from 2018-11
&lt;ul&gt;
&lt;li&gt;I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)&lt;/li&gt;
&lt;li&gt;I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items&lt;/li&gt;
&lt;li&gt;Most worryingly, there are encoding errors in the abstracts for eleven items, for example:&lt;/li&gt;
&lt;li&gt;68.15% <20> 9.45 instead of 68.15% ± 9.45&lt;/li&gt;
&lt;li&gt;2003<EFBFBD>2013 instead of 2003–2013&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>February, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-02/</link>
<pubDate>Fri, 01 Feb 2019 21:37:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-02/</guid>
<description>&lt;h2 id=&#34;2019-02-01&#34;&gt;2019-02-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The top IPs before, during, and after this latest alert tonight were:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;01/Feb/2019:(17|18|19|20|21)&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
245 207.46.13.5
332 54.70.40.11
385 5.143.231.38
405 207.46.13.173
405 207.46.13.75
1117 66.249.66.219
1121 35.237.175.180
1546 5.9.6.51
2474 45.5.186.2
5490 85.25.237.71
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;&lt;code&gt;85.25.237.71&lt;/code&gt; is the &amp;ldquo;Linguee Bot&amp;rdquo; that I first saw last month&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There were just over 3 million accesses in the nginx logs last month:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# time zcat --force /var/log/nginx/* | grep -cE &amp;quot;[0-9]{1,2}/Jan/2019&amp;quot;
3018243
real 0m19.873s
user 0m22.203s
sys 0m1.979s
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>January, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
<pubDate>Wed, 02 Jan 2019 09:48:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-01/</guid>
<description>&lt;h2 id=&#34;2019-01-02&#34;&gt;2019-01-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I don&amp;rsquo;t see anything interesting in the web server logs around that time though:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;02/Jan/2019:0(1|2|3)&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>December, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-12/</link>
<pubDate>Sun, 02 Dec 2018 02:09:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-12/</guid>
<description>&lt;h2 id=&#34;2018-12-01&#34;&gt;2018-12-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK&lt;/li&gt;
&lt;li&gt;I manually installed OpenJDK, then removed Oracle JDK, then re-ran the &lt;a href=&#34;http://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible playbook&lt;/a&gt; to update all configuration files, etc&lt;/li&gt;
&lt;li&gt;Then I ran all system updates and restarted the server&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2018-12-02&#34;&gt;2018-12-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another &lt;a href=&#34;https://usn.ubuntu.com/3831-1/&#34;&gt;Ghostscript vulnerability last week&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>November, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-11/</link>
<pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-11/</guid>
<description>&lt;h2 id=&#34;2018-11-01&#34;&gt;2018-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Finalize AReS Phase I and Phase II ToRs&lt;/li&gt;
&lt;li&gt;Send a note about my &lt;a href=&#34;https://github.com/ilri/dspace-statistics-api&#34;&gt;dspace-statistics-api&lt;/a&gt; to the dspace-tech mailing list&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2018-11-03&#34;&gt;2018-11-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage&lt;/li&gt;
&lt;li&gt;Today these are the top 10 IPs:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>October, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-10/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid>
<description>&lt;h2 id=&#34;2018-10-01&#34;&gt;2018-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items&lt;/li&gt;
&lt;li&gt;I created a GitHub issue to track this &lt;a href=&#34;https://github.com/ilri/DSpace/issues/389&#34;&gt;#389&lt;/a&gt;, because I&amp;rsquo;m super busy in Nairobi right now&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>September, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-09/</link>
<pubDate>Sun, 02 Sep 2018 09:55:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-09/</guid>
<description>&lt;h2 id=&#34;2018-09-02&#34;&gt;2018-09-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;New &lt;a href=&#34;https://jdbc.postgresql.org/documentation/changelog.html#version_42.2.5&#34;&gt;PostgreSQL JDBC driver version 42.2.5&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;I&amp;rsquo;ll update the DSpace role in our &lt;a href=&#34;https://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible infrastructure playbooks&lt;/a&gt; and run the updated playbooks on CGSpace and DSpace Test&lt;/li&gt;
&lt;li&gt;Also, I&amp;rsquo;ll re-run the &lt;code&gt;postgresql&lt;/code&gt; tasks because the custom PostgreSQL variables are dynamic according to the system&amp;rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month&lt;/li&gt;
&lt;li&gt;I&amp;rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&amp;rsquo;m getting those autowire errors in Tomcat 8.5.30 again:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>August, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-08/</link>
<pubDate>Wed, 01 Aug 2018 11:52:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-08/</guid>
<description>&lt;h2 id=&#34;2018-08-01&#34;&gt;2018-08-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;DSpace Test had crashed at some point yesterday morning and I see the following in &lt;code&gt;dmesg&lt;/code&gt;:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;[Tue Jul 31 00:00:41 2018] Out of memory: Kill process 1394 (java) score 668 or sacrifice child
[Tue Jul 31 00:00:41 2018] Killed process 1394 (java) total-vm:15601860kB, anon-rss:5355528kB, file-rss:0kB, shmem-rss:0kB
[Tue Jul 31 00:00:41 2018] oom_reaper: reaped process 1394 (java), now anon-rss:0kB, file-rss:0kB, shmem-rss:0kB
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Judging from the time of the crash it was probably related to the Discovery indexing that starts at midnight&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;From the DSpace log I see that eventually Solr stopped responding, so I guess the &lt;code&gt;java&lt;/code&gt; process that was OOM killed above was Tomcat&amp;rsquo;s&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I&amp;rsquo;m not sure why Tomcat didn&amp;rsquo;t crash with an OutOfMemoryError&amp;hellip;&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Anyways, perhaps I should increase the JVM heap from 5120m to 6144m like we did a few months ago when we tried to run the whole CGSpace Solr core&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The server only has 8GB of RAM so we&amp;rsquo;ll eventually need to upgrade to a larger one because we&amp;rsquo;ll start starving the OS, PostgreSQL, and command line batch processes&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I ran all system updates on DSpace Test and rebooted it&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>July, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-07/</link>
<pubDate>Sun, 01 Jul 2018 12:56:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-07/</guid>
<description>&lt;h2 id=&#34;2018-07-01&#34;&gt;2018-07-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;I want to upgrade DSpace Test to DSpace 5.8 so I took a backup of its current database just in case:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ pg_dump -b -v -o --format=custom -U dspace -f dspace-2018-07-01.backup dspace
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;During the &lt;code&gt;mvn package&lt;/code&gt; stage on the 5.8 branch I kept getting issues with java running out of memory:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;There is insufficient memory for the Java Runtime Environment to continue.
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>June, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-06/</link>
<pubDate>Mon, 04 Jun 2018 19:49:54 -0700</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-06/</guid>
<description>&lt;h2 id=&#34;2018-06-04&#34;&gt;2018-06-04&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Test the &lt;a href=&#34;https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=560&#34;&gt;DSpace 5.8 module upgrades from Atmire&lt;/a&gt; (&lt;a href=&#34;https://github.com/ilri/DSpace/pull/378&#34;&gt;#378&lt;/a&gt;)
&lt;ul&gt;
&lt;li&gt;There seems to be a problem with the CUA and L&amp;amp;R versions in &lt;code&gt;pom.xml&lt;/code&gt; because they are using SNAPSHOT and it doesn&amp;rsquo;t build&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;I added the new CCAFS Phase II Project Tag &lt;code&gt;PII-FP1_PACCA2&lt;/code&gt; and merged it into the &lt;code&gt;5_x-prod&lt;/code&gt; branch (&lt;a href=&#34;https://github.com/ilri/DSpace/pull/379&#34;&gt;#379&lt;/a&gt;)&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I proofed and tested the ILRI author corrections that Peter sent back to me this week:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ ./fix-metadata-values.py -i /tmp/2018-05-30-Correct-660-authors.csv -db dspace -u dspace -p &#39;fuuu&#39; -f dc.contributor.author -t correct -m 3 -n
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I think a sane proofing workflow in OpenRefine is to apply the custom text facets for check/delete/remove and illegal characters that I developed in &lt;a href=&#34;https://alanorth.github.io/cgspace-notes/cgspace-notes/2018-03/&#34;&gt;March, 2018&lt;/a&gt;&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Time to index ~70,000 items on CGSpace:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ time schedtool -D -e ionice -c2 -n7 nice -n19 [dspace]/bin/dspace index-discovery -b
real 74m42.646s
user 8m5.056s
sys 2m7.289s
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>May, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-05/</link>
<pubDate>Tue, 01 May 2018 16:43:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-05/</guid>
<description>&lt;h2 id=&#34;2018-05-01&#34;&gt;2018-05-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
&lt;ul&gt;
&lt;li&gt;&lt;a href=&#34;http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E&#34;&gt;http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;&lt;a href=&#34;http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E&#34;&gt;http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Then I reduced the JVM heap size from 6144 back to 5120m&lt;/li&gt;
&lt;li&gt;Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the &lt;a href=&#34;https://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible infrastructure scripts&lt;/a&gt; to support hosts choosing which distribution they want to use&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-04/</link>
<pubDate>Sun, 01 Apr 2018 16:13:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-04/</guid>
<description>&lt;h2 id=&#34;2018-04-01&#34;&gt;2018-04-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to test something on DSpace Test but noticed that it&amp;rsquo;s down since god knows when&lt;/li&gt;
&lt;li&gt;Catalina logs at least show some memory errors yesterday:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>March, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-03/</link>
<pubDate>Fri, 02 Mar 2018 16:07:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-03/</guid>
<description>&lt;h2 id=&#34;2018-03-02&#34;&gt;2018-03-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Export a CSV of the IITA community metadata for Martin Mueller&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>February, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-02/</link>
<pubDate>Thu, 01 Feb 2018 16:28:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-02/</guid>
<description>&lt;h2 id=&#34;2018-02-01&#34;&gt;2018-02-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Peter gave feedback on the &lt;code&gt;dc.rights&lt;/code&gt; proof of concept that I had sent him last week&lt;/li&gt;
&lt;li&gt;We don&amp;rsquo;t need to distinguish between internal and external works, so that makes it just a simple list&lt;/li&gt;
&lt;li&gt;Yesterday I figured out how to monitor DSpace sessions using JMX&lt;/li&gt;
&lt;li&gt;I copied the logic in the &lt;code&gt;jmx_tomcat_dbpools&lt;/code&gt; provided by Ubuntu&amp;rsquo;s &lt;code&gt;munin-plugins-java&lt;/code&gt; package and used the stuff I discovered about JMX &lt;a href=&#34;https://alanorth.github.io/cgspace-notes/cgspace-notes/2018-01/&#34;&gt;in 2018-01&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>January, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-01/</link>
<pubDate>Tue, 02 Jan 2018 08:35:54 -0800</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-01/</guid>
<description>&lt;h2 id=&#34;2018-01-02&#34;&gt;2018-01-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time&lt;/li&gt;
&lt;li&gt;I didn&amp;rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&amp;rsquo;t show anything out of the ordinary&lt;/li&gt;
&lt;li&gt;The nginx logs show HTTP 200s until &lt;code&gt;02/Jan/2018:11:27:17 +0000&lt;/code&gt; when Uptime Robot got an HTTP 500&lt;/li&gt;
&lt;li&gt;In dspace.log around that time I see many errors like &amp;ldquo;Client closed the connection before file download was complete&amp;rdquo;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;And just before that I see this:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Ah hah! So the pool was actually empty!&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I need to increase that, let&amp;rsquo;s try to bump it up from 50 to 75&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&amp;rsquo;t know what the hell Uptime Robot saw&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I notice this error quite a few times in dspace.log:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse &#39;dateIssued_keyword:[1976+TO+1979]&#39;: Encountered &amp;quot; &amp;quot;]&amp;quot; &amp;quot;] &amp;quot;&amp;quot; at line 1, column 32.
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;And there are many of these errors every day for the past month:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ grep -c &amp;quot;Error while searching for sidebar facets&amp;quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&amp;rsquo;s Encrypt if it&amp;rsquo;s just a handful of domains&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>December, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-12/</link>
<pubDate>Fri, 01 Dec 2017 13:53:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-12/</guid>
<description>&lt;h2 id=&#34;2017-12-01&#34;&gt;2017-12-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Uptime Robot noticed that CGSpace went down&lt;/li&gt;
&lt;li&gt;The logs say &amp;ldquo;Timeout waiting for idle object&amp;rdquo;&lt;/li&gt;
&lt;li&gt;PostgreSQL activity says there are 115 connections currently&lt;/li&gt;
&lt;li&gt;The list of connections to XMLUI and REST API for today:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>November, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-11/</link>
<pubDate>Thu, 02 Nov 2017 09:37:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-11/</guid>
<description>&lt;h2 id=&#34;2017-11-01&#34;&gt;2017-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;The CORE developers responded to say they are looking into their bot not respecting our robots.txt&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2017-11-02&#34;&gt;2017-11-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;Today there have been no hits by CORE and no alerts from Linode (coincidence?)&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# grep -c &amp;quot;CORE&amp;quot; /var/log/nginx/access.log
0
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Generate list of authors on CGSpace for Peter to go through and correct:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = &#39;contributor&#39; and qualifier = &#39;author&#39;) AND resource_type_id = 2 group by text_value order by count desc) to /tmp/authors.csv with csv;
COPY 54701
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>October, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-10/</link>
<pubDate>Sun, 01 Oct 2017 08:07:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-10/</guid>
<description>&lt;h2 id=&#34;2017-10-01&#34;&gt;2017-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;Peter emailed to point out that many items in the &lt;a href=&#34;https://cgspace.cgiar.org/handle/10568/2703&#34;&gt;ILRI archive collection&lt;/a&gt; have multiple handles:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;http://hdl.handle.net/10568/78495||http://hdl.handle.net/10568/79336
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There appears to be a pattern but I&amp;rsquo;ll have to look a bit closer and try to clean them up automatically, either in SQL or in OpenRefine&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Add Katherine Lutz to the groups for content submission and edit steps of the CGIAR System collections&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item> <item>
<title>CGIAR Library Migration</title> <title>CGIAR Library Migration</title>
<link>https://alanorth.github.io/cgspace-notes/cgiar-library-migration/</link> <link>https://alanorth.github.io/cgspace-notes/cgiar-library-migration/</link>

87
docs/categories/page/2/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-09-18T16:38:35+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,49 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -125,8 +162,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -155,8 +192,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -178,8 +215,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -203,8 +240,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -242,8 +279,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -272,8 +309,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -315,8 +352,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -344,8 +381,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -362,28 +399,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/" rel="prev" role="button">Previous page</a>
@ -408,6 +423,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -416,8 +433,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

62
docs/categories/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-09-18T16:38:35+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -120,8 +142,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -212,8 +234,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -237,8 +259,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -275,8 +297,8 @@ COPY 54701
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -307,6 +329,8 @@ COPY 54701
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> <p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p>
@ -415,24 +439,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/2/" rel="prev" role="button">Previous page</a>
@ -457,6 +463,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -465,8 +473,6 @@ COPY 54701
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

61
docs/categories/page/4/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-09-18T16:38:35+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,24 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
@ -367,39 +385,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/categories/page/3/" rel="prev" role="button">Previous page</a>
@ -424,6 +409,8 @@ $ git rebase -i dspace-5.5
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -432,8 +419,6 @@ $ git rebase -i dspace-5.5
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

43
docs/categories/page/5/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/categories/" />
<meta property="og:updated_time" content="2017-09-18T16:38:35+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Categories"/> <meta name="twitter:title" content="Categories"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2017-09-18T16:38:35+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,39 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
@ -367,6 +400,8 @@ text_value
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -375,8 +410,6 @@ text_value
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

12
docs/cgiar-library-migration/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="article" /> <meta property="og:type" content="article" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/cgiar-library-migration/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/cgiar-library-migration/" />
<meta property="article:published_time" content="2017-09-18T16:38:35+03:00" /> <meta property="article:published_time" content="2017-09-18T16:38:35+03:00" />
<meta property="article:modified_time" content="2018-03-09T22:10:33+02:00" /> <meta property="article:modified_time" content="2019-10-28T13:40:20+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGIAR Library Migration"/> <meta name="twitter:title" content="CGIAR Library Migration"/>
@ -27,12 +27,12 @@
"url": "https:\/\/alanorth.github.io\/cgspace-notes\/cgiar-library-migration\/", "url": "https:\/\/alanorth.github.io\/cgspace-notes\/cgiar-library-migration\/",
"wordCount": "1285", "wordCount": "1285",
"datePublished": "2017-09-18T16:38:35+03:00", "datePublished": "2017-09-18T16:38:35+03:00",
"dateModified": "2018-03-09T22:10:33+02:00", "dateModified": "2019-10-28T13:40:20+02:00",
"author": { "author": {
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"keywords": "Notes", "keywords": "Notes, Migration",
"description": "Notes on the migration of the CGIAR Library to CGSpace" "description": "Notes on the migration of the CGIAR Library to CGSpace"
} }
</script> </script>
@ -95,6 +95,8 @@
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> <p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p>
@ -327,6 +329,8 @@ dspace=# select setval('handle_seq',86873);
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -335,8 +339,6 @@ dspace=# select setval('handle_seq',86873);
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

87
docs/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-28T13:27:35&#43;02:00">Mon Oct 28, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p>
</header>
<p>Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.</p>
<p>With reference to <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2 draft standard</a> by Marie-Angélique as well as <a href="http://www.dublincore.org/specifications/dublin-core/dcmi-terms/">DCMI DCTERMS</a>.</p>
<a href='https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -114,8 +136,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -162,8 +184,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -197,8 +219,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -226,8 +248,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -255,8 +277,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -291,8 +313,8 @@ DELETE 1
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -337,8 +359,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -370,8 +392,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -416,43 +438,6 @@ sys 0m1.979s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +462,8 @@ sys 0m1.979s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -485,8 +472,6 @@ sys 0m1.979s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

13
docs/index.xml
View File

@ -6,11 +6,22 @@
<description>Recent content on CGSpace Notes</description> <description>Recent content on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Tue, 01 Oct 2019 13:20:51 +0300</lastBuildDate> <lastBuildDate>Mon, 28 Oct 2019 13:27:35 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>CGSpace CG Core v2 Migration</title>
<link>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</link>
<pubDate>Mon, 28 Oct 2019 13:27:35 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</guid>
<description>&lt;p&gt;Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.&lt;/p&gt;
&lt;p&gt;With reference to &lt;a href=&#34;https://agriculturalsemantics.github.io/cg-core/cgcore.html&#34;&gt;CG Core v2 draft standard&lt;/a&gt; by Marie-Angélique as well as &lt;a href=&#34;http://www.dublincore.org/specifications/dublin-core/dcmi-terms/&#34;&gt;DCMI DCTERMS&lt;/a&gt;.&lt;/p&gt;</description>
</item>
<item> <item>
<title>October, 2019</title> <title>October, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-10/</link> <link>https://alanorth.github.io/cgspace-notes/2019-10/</link>

87
docs/page/2/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,49 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -125,8 +162,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -155,8 +192,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -178,8 +215,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -203,8 +240,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -242,8 +279,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -272,8 +309,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -315,8 +352,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -344,8 +381,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -362,28 +399,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/" rel="prev" role="button">Previous page</a>
@ -408,6 +423,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -416,8 +433,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

62
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View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -120,8 +142,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -212,8 +234,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -237,8 +259,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -275,8 +297,8 @@ COPY 54701
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -307,6 +329,8 @@ COPY 54701
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> <p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p>
@ -415,24 +439,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/page/2/" rel="prev" role="button">Previous page</a>
@ -457,6 +463,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -465,8 +473,6 @@ COPY 54701
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

61
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,24 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
@ -367,39 +385,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/page/3/" rel="prev" role="button">Previous page</a>
@ -424,6 +409,8 @@ $ git rebase -i dspace-5.5
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -432,8 +419,6 @@ $ git rebase -i dspace-5.5
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

43
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="CGSpace Notes"/> <meta name="twitter:title" content="CGSpace Notes"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,39 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
@ -367,6 +400,8 @@ text_value
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -375,8 +410,6 @@ text_value
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

87
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-28T13:27:35&#43;02:00">Mon Oct 28, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p>
</header>
<p>Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.</p>
<p>With reference to <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2 draft standard</a> by Marie-Angélique as well as <a href="http://www.dublincore.org/specifications/dublin-core/dcmi-terms/">DCMI DCTERMS</a>.</p>
<a href='https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -114,8 +136,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -162,8 +184,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -197,8 +219,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -226,8 +248,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -255,8 +277,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -291,8 +313,8 @@ DELETE 1
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -337,8 +359,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -370,8 +392,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -416,43 +438,6 @@ sys 0m1.979s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +462,8 @@ sys 0m1.979s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -485,8 +472,6 @@ sys 0m1.979s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

13
docs/posts/index.xml
View File

@ -6,11 +6,22 @@
<description>Recent content in Posts on CGSpace Notes</description> <description>Recent content in Posts on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Tue, 01 Oct 2019 13:20:51 +0300</lastBuildDate> <lastBuildDate>Mon, 28 Oct 2019 13:27:35 +0200</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/posts/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>CGSpace CG Core v2 Migration</title>
<link>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</link>
<pubDate>Mon, 28 Oct 2019 13:27:35 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</guid>
<description>&lt;p&gt;Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.&lt;/p&gt;
&lt;p&gt;With reference to &lt;a href=&#34;https://agriculturalsemantics.github.io/cg-core/cgcore.html&#34;&gt;CG Core v2 draft standard&lt;/a&gt; by Marie-Angélique as well as &lt;a href=&#34;http://www.dublincore.org/specifications/dublin-core/dcmi-terms/&#34;&gt;DCMI DCTERMS&lt;/a&gt;.&lt;/p&gt;</description>
</item>
<item> <item>
<title>October, 2019</title> <title>October, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-10/</link> <link>https://alanorth.github.io/cgspace-notes/2019-10/</link>

87
docs/posts/page/2/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,49 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -125,8 +162,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -155,8 +192,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -178,8 +215,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -203,8 +240,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -242,8 +279,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -272,8 +309,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -315,8 +352,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -344,8 +381,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -362,28 +399,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/" rel="prev" role="button">Previous page</a>
@ -408,6 +423,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -416,8 +433,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

62
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -120,8 +142,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -212,8 +234,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -237,8 +259,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -275,8 +297,8 @@ COPY 54701
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -307,6 +329,8 @@ COPY 54701
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> <p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p>
@ -415,24 +439,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/2/" rel="prev" role="button">Previous page</a>
@ -457,6 +463,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -465,8 +473,6 @@ COPY 54701
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

61
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,24 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
@ -367,39 +385,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/posts/page/3/" rel="prev" role="button">Previous page</a>
@ -424,6 +409,8 @@ $ git rebase -i dspace-5.5
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -432,8 +419,6 @@ $ git rebase -i dspace-5.5
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

43
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/posts/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Posts"/> <meta name="twitter:title" content="Posts"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,39 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
@ -367,6 +400,8 @@ text_value
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -375,8 +410,6 @@ text_value
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

10
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@ -1,11 +1,14 @@
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Disallow: /cgspace-notes/categories/
Disallow: /cgspace-notes/cgspace-cgcorev2-migration/
Disallow: /cgspace-notes/ Disallow: /cgspace-notes/
Disallow: /cgspace-notes/tags/notes/ Disallow: /cgspace-notes/tags/migration/
Disallow: /cgspace-notes/2019-10/ Disallow: /cgspace-notes/categories/notes/
Disallow: /cgspace-notes/posts/ Disallow: /cgspace-notes/posts/
Disallow: /cgspace-notes/tags/ Disallow: /cgspace-notes/tags/
Disallow: /cgspace-notes/2019-10/
Disallow: /cgspace-notes/2019-09/ Disallow: /cgspace-notes/2019-09/
Disallow: /cgspace-notes/2019-08/ Disallow: /cgspace-notes/2019-08/
Disallow: /cgspace-notes/2019-07/ Disallow: /cgspace-notes/2019-07/
@ -30,9 +33,8 @@ Disallow: /cgspace-notes/2018-01/
Disallow: /cgspace-notes/2017-12/ Disallow: /cgspace-notes/2017-12/
Disallow: /cgspace-notes/2017-11/ Disallow: /cgspace-notes/2017-11/
Disallow: /cgspace-notes/2017-10/ Disallow: /cgspace-notes/2017-10/
Disallow: /cgspace-notes/categories/
Disallow: /cgspace-notes/cgiar-library-migration/ Disallow: /cgspace-notes/cgiar-library-migration/
Disallow: /cgspace-notes/categories/notes/ Disallow: /cgspace-notes/tags/notes/
Disallow: /cgspace-notes/2017-09/ Disallow: /cgspace-notes/2017-09/
Disallow: /cgspace-notes/2017-08/ Disallow: /cgspace-notes/2017-08/
Disallow: /cgspace-notes/2017-07/ Disallow: /cgspace-notes/2017-07/

308
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</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-04/</loc>
<lastmod>2019-07-04T19:37:10+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-03/</loc>
<lastmod>2019-07-12T14:05:21+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-02/</loc>
<lastmod>2019-03-18T15:25:49+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-01/</loc>
<lastmod>2019-02-01T21:45:50+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-12/</loc>
<lastmod>2018-12-30T18:12:18+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-11/</loc>
<lastmod>2019-02-07T10:52:23+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-10/</loc>
<lastmod>2018-11-01T16:42:20+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-09/</loc>
<lastmod>2018-09-30T08:23:48+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-08/</loc>
<lastmod>2018-09-10T23:35:46+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-07/</loc>
<lastmod>2018-07-28T12:06:56+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-06/</loc>
<lastmod>2018-06-28T13:37:35+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-05/</loc>
<lastmod>2018-09-04T16:15:26+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-04/</loc>
<lastmod>2018-04-30T18:45:30+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-03/</loc>
<lastmod>2019-04-26T12:13:02+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-02/</loc>
<lastmod>2018-08-19T18:42:55+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-01/</loc>
<lastmod>2018-03-28T09:48:08+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-12/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-11/</loc>
<lastmod>2018-04-10T08:27:55+03:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-10/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod>
</url>
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/categories/</loc> <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod> <lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url> </url>
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/cgiar-library-migration/</loc> <loc>https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod> <lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/</loc>
<lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/migration/</loc>
<lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url> </url>
<url> <url>
<loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc> <loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
<lastmod>2018-03-09T22:10:33+02:00</lastmod> <lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
<lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
<lastmod>2019-10-28T13:42:02+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-10/</loc>
<lastmod>2019-10-28T13:41:08+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-09/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-08/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-07/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-06/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-05/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-04/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-03/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-02/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2019-01/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-12/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-11/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-10/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-09/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-08/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-07/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-06/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-05/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-04/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-03/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-02/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2018-01/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-12/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-11/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/2017-10/</loc>
<lastmod>2019-10-28T13:39:25+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/cgiar-library-migration/</loc>
<lastmod>2019-10-28T13:40:20+02:00</lastmod>
</url>
<url>
<loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
<lastmod>2019-03-04T02:43:22+02:00</lastmod>
</url> </url>
<url> <url>

87
docs/tags/index.html
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-28T13:27:35&#43;02:00">Mon Oct 28, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p>
</header>
<p>Possible changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2.</p>
<p>With reference to <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2 draft standard</a> by Marie-Angélique as well as <a href="http://www.dublincore.org/specifications/dublin-core/dcmi-terms/">DCMI DCTERMS</a>.</p>
<a href='https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -114,8 +136,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -162,8 +184,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -197,8 +219,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -226,8 +248,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -255,8 +277,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -291,8 +313,8 @@ DELETE 1
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -337,8 +359,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -370,8 +392,8 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -416,43 +438,6 @@ sys 0m1.979s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
@ -477,6 +462,8 @@ sys 0m1.979s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -485,8 +472,6 @@ sys 0m1.979s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

13
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@ -6,15 +6,24 @@
<description>Recent content in Tags on CGSpace Notes</description> <description>Recent content in Tags on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
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<pubDate>Mon, 28 Oct 2019 13:27:35 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/tags/migration/</guid>
<description></description>
</item>
<item> <item>
<title>Notes</title> <title>Notes</title>
<link>https://alanorth.github.io/cgspace-notes/tags/notes/</link> <link>https://alanorth.github.io/cgspace-notes/tags/notes/</link>
<pubDate>Tue, 01 Oct 2019 13:20:51 +0300</pubDate> <pubDate>Thu, 07 Sep 2017 16:54:52 +0700</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/tags/notes/</guid> <guid>https://alanorth.github.io/cgspace-notes/tags/notes/</guid>
<description></description> <description></description>

442
docs/tags/notes/index.html
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2017-09-07T16:54:52+07:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -78,16 +78,25 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-10/">October, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-09/">September, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2019-10-01T13:20:51&#43;03:00">Tue Oct 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-09-07T16:54:52&#43;07:00">Thu Sep 07, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
2019-10-01 Udana from IWMI asked me for a CSV export of their community on CGSpace <h2 id="2017-09-06">2017-09-06</h2>
I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&rsquo;s &ldquo;unneccesary Unicode&rdquo; fix:
<a href='https://alanorth.github.io/cgspace-notes/2019-10/'>Read more →</a> <ul>
<li>Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two hours</li>
</ul>
<h2 id="2017-09-07">2017-09-07</h2>
<ul>
<li>Ask Sisay to clean up the WLE approvers a bit, as Marianne&rsquo;s user account is both in the approvers step as well as the group</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-09/'>Read more →</a>
</article> </article>
@ -97,45 +106,137 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-09/">September, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2019-09-01T10:17:51&#43;03:00">Sun Sep 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2019-09-01">2019-09-01</h2> <h2 id="2017-08-01">2017-08-01</h2>
<ul> <ul>
<li>Linode emailed to say that CGSpace (linode18) had a high rate of outbound traffic for several hours this morning</li> <li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<li><p>Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:</p> <ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<pre><code># zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &quot;01/Sep/2019:0&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
440 17.58.101.255
441 157.55.39.101
485 207.46.13.43
728 169.60.128.125
730 207.46.13.108 <article class="blog-post">
758 157.55.39.9 <header>
808 66.160.140.179 <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
814 207.46.13.212 <p class="blog-post-meta"><time datetime="2017-07-01T18:03:52&#43;03:00">Sat Jul 01, 2017</time> by Alan Orth in
2472 163.172.71.23
6092 3.94.211.189 <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
# zcat --force /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E &quot;01/Sep/2019:0&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
33 2a01:7e00::f03c:91ff:fe16:fcb </p>
57 3.83.192.124 </header>
57 3.87.77.25 <h2 id="2017-07-01">2017-07-01</h2>
57 54.82.1.8
822 2a01:9cc0:47:1:1a:4:0:2 <ul>
1223 45.5.184.72 <li>Run system updates and reboot DSpace Test</li>
1633 172.104.229.92 </ul>
5112 205.186.128.185
7249 2a01:7e00::f03c:91ff:fe18:7396 <h2 id="2017-07-04">2017-07-04</h2>
9124 45.5.186.2
<ul>
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
<li>Looking at extracting the metadata registries from ICARDA&rsquo;s MEL DSpace database so we can compare fields with CGSpace</li>
<li>We can use PostgreSQL&rsquo;s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-05-01T16:21:52&#43;02:00">Mon May 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
<a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li><p>Testing the CMYK patch on a collection with 650 items:</p>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre></li> </code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-09/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
</article> </article>
@ -145,32 +246,38 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-08/">August, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2019-08-03T12:39:51&#43;03:00">Sat Aug 03, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-03-01T17:08:52&#43;02:00">Wed Mar 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2019-08-03">2019-08-03</h2> <h2 id="2017-03-01">2017-03-01</h2>
<ul> <ul>
<li>Look at Bioversity&rsquo;s latest migration CSV and now I see that Francesco has cleaned up the extra columns and the newline at the end of the file, but many of the column headers have an extra space in the name&hellip;</li> <li>Run the 279 CIAT author corrections on CGSpace</li>
</ul> </ul>
<h2 id="2019-08-04">2019-08-04</h2> <h2 id="2017-03-02">2017-03-02</h2>
<ul> <ul>
<li>Deploy ORCID identifier updates requested by Bioversity to CGSpace</li> <li>Skype with Michael and Peter, discussing moving the CGIAR Library to CGSpace</li>
<li>Run system updates on CGSpace (linode18) and reboot it <li>CGIAR people possibly open to moving content, redirecting library.cgiar.org to CGSpace and letting CGSpace resolve their handles</li>
<li>They might come in at the top level in one &ldquo;CGIAR System&rdquo; community, or with several communities</li>
<li>I need to spend a bit of time looking at the multiple handle support in DSpace and see if new content can be minted in both handles, or just one?</li>
<li>Need to send Peter and Michael some notes about this in a few days</li>
<li>Also, need to consider talking to Atmire about hiring them to bring ORCiD metadata to REST / OAI</li>
<li>Filed an issue on DSpace issue tracker for the <code>filter-media</code> bug that causes it to process JPGs even when limiting to the PDF thumbnail plugin: <a href="https://jira.duraspace.org/browse/DS-3516">DS-3516</a></li>
<li>Discovered that the ImageMagic <code>filter-media</code> plugin creates JPG thumbnails with the CMYK colorspace when the source PDF is using CMYK</li>
<ul> <li><p>Interestingly, it seems DSpace 4.x&rsquo;s thumbnails were sRGB, but forcing regeneration using DSpace 5.x&rsquo;s ImageMagick plugin creates CMYK JPGs if the source PDF was CMYK (see <a href="https://cgspace.cgiar.org/handle/10568/51999"><sup>10568</sup>&frasl;<sub>51999</sub></a>):</p>
<li>Before updating it I checked Solr and verified that all statistics cores were loaded properly&hellip;</li>
<li>After rebooting, all statistics cores were loaded&hellip; wow, that&rsquo;s lucky.</li> <pre><code>$ identify ~/Desktop/alc_contrastes_desafios.jpg
</ul></li> /Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000
<li>Run system updates on DSpace Test (linode19) and reboot it</li> </code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-08/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2017-03/'>Read more →</a>
</article> </article>
@ -180,91 +287,34 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-07/">July, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2019-07-01T12:13:51&#43;03:00">Mon Jul 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2019-07-01">2019-07-01</h2> <h2 id="2017-02-07">2017-02-07</h2>
<ul> <ul>
<li>Create an &ldquo;AfricaRice books and book chapters&rdquo; collection on CGSpace for AfricaRice</li> <li><p>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</p>
<li>Last month Sisay asked why the following &ldquo;most popular&rdquo; statistics link for a range of months in 2018 works for the CIAT community on DSpace Test, but not on CGSpace:
<ul> <pre><code>dspace=# select * from collection2item where item_id = '80278';
<li><a href="https://dspacetest.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;time_filter_end_date=01%2F12%2F2018">DSpace Test</a></li> id | collection_id | item_id
<li><a href="https://cgspace.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;time_filter_end_date=01%2F12%2F2018">CGSpace</a></li> -------+---------------+---------
</ul></li> 92551 | 313 | 80278
<li>Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community</li> 92550 | 313 | 80278
</ul> 90774 | 1051 | 80278
<a href='https://alanorth.github.io/cgspace-notes/2019-07/'>Read more →</a> (3 rows)
</article> dspace=# delete from collection2item where id = 92551 and item_id = 80278;
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-06/">June, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-06-02T10:57:51&#43;03:00">Sun Jun 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-06-02">2019-06-02</h2>
<ul>
<li>Merge the <a href="https://github.com/ilri/DSpace/pull/425">Solr filterCache</a> and <a href="https://github.com/ilri/DSpace/pull/426">XMLUI ISI journal</a> changes to the <code>5_x-prod</code> branch and deploy on CGSpace</li>
<li>Run system updates on CGSpace (linode18) and reboot it</li>
</ul>
<h2 id="2019-06-03">2019-06-03</h2>
<ul>
<li>Skype with Marie-Angélique and Abenet about <a href="https://agriculturalsemantics.github.io/cg-core/cgcore.html">CG Core v2</a></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-05/">May, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-05-01T07:37:43&#43;03:00">Wed May 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-05-01">2019-05-01</h2>
<ul>
<li>Help CCAFS with regenerating some item thumbnails after they uploaded new PDFs to some items on CGSpace</li>
<li>A user on the dspace-tech mailing list offered some suggestions for troubleshooting the problem with the inability to delete certain items
<ul>
<li>Apparently if the item is in the <code>workflowitem</code> table it is submitted to a workflow</li>
<li>And if it is in the <code>workspaceitem</code> table it is in the pre-submitted state</li>
</ul></li>
<li><p>The item seems to be in a pre-submitted state, so I tried to delete it from there:</p>
<pre><code>dspace=# DELETE FROM workspaceitem WHERE item_id=74648;
DELETE 1 DELETE 1
</code></pre></li> </code></pre></li>
<li><p>But after this I tried to delete the item from the XMLUI and it is <em>still</em> present&hellip;</p></li> <li><p>Create issue on GitHub to track the addition of CCAFS Phase II project tags (<a href="https://github.com/ilri/DSpace/issues/301">#301</a>)</p></li>
<li><p>Looks like we&rsquo;ll be using <code>cg.identifier.ccafsprojectpii</code> as the field name</p></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-05/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2017-02/'>Read more →</a>
</article> </article>
@ -274,43 +324,21 @@ DELETE 1
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-04/">April, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-01/">January, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2019-04-01T09:00:43&#43;03:00">Mon Apr 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-01-02T10:43:00&#43;03:00">Mon Jan 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2019-04-01">2019-04-01</h2> <h2 id="2017-01-02">2017-01-02</h2>
<ul> <ul>
<li>Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc <li>I checked to see if the Solr sharding task that is supposed to run on January 1st had run and saw there was an error</li>
<li>I tested on DSpace Test as well and it doesn&rsquo;t work there either</li>
<ul> <li>I asked on the dspace-tech mailing list because it seems to be broken, and actually now I&rsquo;m not sure if we&rsquo;ve ever had the sharding task run successfully over all these years</li>
<li>They asked if we had plans to enable RDF support in CGSpace</li>
</ul></li>
<li><p>There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today</p>
<ul>
<li><p>I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!</p>
<pre><code># cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep 'Spore-192-EN-web.pdf' | grep -E '(18.196.196.108|18.195.78.144|18.195.218.6)' | awk '{print $9}' | sort | uniq -c | sort -n | tail -n 5
4432 200
</code></pre></li>
</ul></li>
<li><p>In the last two weeks there have been 47,000 downloads of this <em>same exact PDF</em> by these three IP addresses</p></li>
<li><p>Apply country and region corrections and deletions on DSpace Test and CGSpace:</p>
<pre><code>$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.country -m 228 -t ACTION -d
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p 'fuuu' -f cg.coverage.region -m 231 -t action -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p 'fuuu' -m 228 -f cg.coverage.country -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p 'fuuu' -m 231 -f cg.coverage.region -d
</code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-04/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2017-01/'>Read more →</a>
</article> </article>
@ -320,118 +348,34 @@ $ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-03/">March, 2019</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-12/">December, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2019-03-01T12:16:30&#43;01:00">Fri Mar 01, 2019</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-12-02T10:43:00&#43;03:00">Fri Dec 02, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2019-03-01">2019-03-01</h2> <h2 id="2016-12-02">2016-12-02</h2>
<ul> <ul>
<li>I checked IITA&rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good</li> <li>CGSpace was down for five hours in the morning while I was sleeping</li>
<li>I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&hellip;</li>
<li>Looking at the other half of Udana&rsquo;s WLE records from 2018-11
<ul> <li><p>While looking in the logs for errors, I see tons of warnings about Atmire MQM:</p>
<li>I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)</li>
<li>I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items</li>
<li>Most worryingly, there are encoding errors in the abstracts for eleven items, for example:</li>
<li>68.15% <20> 9.45 instead of 68.15% ± 9.45</li>
<li>2003<EFBFBD>2013 instead of 2003–2013</li>
</ul></li>
<li>I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-03/'>Read more →</a>
</article>
<pre><code>2016-12-02 03:00:32,352 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=CREATE, SubjectType=BUNDLE, SubjectID=70316, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632305, dispatcher=1544803905, detail=[null], transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=MODIFY_METADATA, SubjectType=BUNDLE, SubjectID =70316, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632309, dispatcher=1544803905, detail=&quot;dc.title&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=ADD, SubjectType=ITEM, SubjectID=80044, Object Type=BUNDLE, ObjectID=70316, TimeStamp=1480647632311, dispatcher=1544803905, detail=&quot;THUMBNAIL&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=ADD, SubjectType=BUNDLE, SubjectID=70316, Obje ctType=BITSTREAM, ObjectID=86715, TimeStamp=1480647632318, dispatcher=1544803905, detail=&quot;-1&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=MODIFY, SubjectType=ITEM, SubjectID=80044, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632351, dispatcher=1544803905, detail=[null], transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-02/">February, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-02-01T21:37:30&#43;02:00">Fri Feb 01, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-02-01">2019-02-01</h2>
<ul>
<li>Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!</li>
<li><p>The top IPs before, during, and after this latest alert tonight were:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;01/Feb/2019:(17|18|19|20|21)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
245 207.46.13.5
332 54.70.40.11
385 5.143.231.38
405 207.46.13.173
405 207.46.13.75
1117 66.249.66.219
1121 35.237.175.180
1546 5.9.6.51
2474 45.5.186.2
5490 85.25.237.71
</code></pre></li> </code></pre></li>
<li><p><code>85.25.237.71</code> is the &ldquo;Linguee Bot&rdquo; that I first saw last month</p></li> <li><p>I see thousands of them in the logs for the last few months, so it&rsquo;s not related to the DSpace 5.5 upgrade</p></li>
<li><p>The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase</p></li> <li><p>I&rsquo;ve raised a ticket with Atmire to ask</p></li>
<li><p>There were just over 3 million accesses in the nginx logs last month:</p> <li><p>Another worrying error from dspace.log is:</p></li>
<pre><code># time zcat --force /var/log/nginx/* | grep -cE &quot;[0-9]{1,2}/Jan/2019&quot;
3018243
real 0m19.873s
user 0m22.203s
sys 0m1.979s
</code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-02/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-12/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article> </article>
@ -462,6 +406,8 @@ sys 0m1.979s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -470,8 +416,6 @@ sys 0m1.979s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

643
docs/tags/notes/index.xml
View File

@ -6,652 +6,11 @@
<description>Recent content in Notes on CGSpace Notes</description> <description>Recent content in Notes on CGSpace Notes</description>
<generator>Hugo -- gohugo.io</generator> <generator>Hugo -- gohugo.io</generator>
<language>en-us</language> <language>en-us</language>
<lastBuildDate>Tue, 01 Oct 2019 13:20:51 +0300</lastBuildDate> <lastBuildDate>Thu, 07 Sep 2017 16:54:52 +0700</lastBuildDate>
<atom:link href="https://alanorth.github.io/cgspace-notes/tags/notes/index.xml" rel="self" type="application/rss+xml" /> <atom:link href="https://alanorth.github.io/cgspace-notes/tags/notes/index.xml" rel="self" type="application/rss+xml" />
<item>
<title>October, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-10/</link>
<pubDate>Tue, 01 Oct 2019 13:20:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-10/</guid>
<description>2019-10-01 Udana from IWMI asked me for a CSV export of their community on CGSpace
I exported it, but a quick run through the csv-metadata-quality tool shows that there are some low-hanging fruits we can fix before I send him the data I will limit the scope to the titles, regions, subregions, and river basins for now to manually fix some non-breaking spaces (U+00A0) there that would otherwise be removed by the csv-metadata-quality script&amp;rsquo;s &amp;ldquo;unneccesary Unicode&amp;rdquo; fix:</description>
</item>
<item>
<title>September, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-09/</link>
<pubDate>Sun, 01 Sep 2019 10:17:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-09/</guid>
<description>&lt;h2 id=&#34;2019-09-01&#34;&gt;2019-09-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode emailed to say that CGSpace (linode18) had a high rate of outbound traffic for several hours this morning&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Here are the top ten IPs in the nginx XMLUI and REST/OAI logs this morning:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep -E &amp;quot;01/Sep/2019:0&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
440 17.58.101.255
441 157.55.39.101
485 207.46.13.43
728 169.60.128.125
730 207.46.13.108
758 157.55.39.9
808 66.160.140.179
814 207.46.13.212
2472 163.172.71.23
6092 3.94.211.189
# zcat --force /var/log/nginx/rest.log /var/log/nginx/rest.log.1 /var/log/nginx/oai.log /var/log/nginx/oai.log.1 | grep -E &amp;quot;01/Sep/2019:0&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
33 2a01:7e00::f03c:91ff:fe16:fcb
57 3.83.192.124
57 3.87.77.25
57 54.82.1.8
822 2a01:9cc0:47:1:1a:4:0:2
1223 45.5.184.72
1633 172.104.229.92
5112 205.186.128.185
7249 2a01:7e00::f03c:91ff:fe18:7396
9124 45.5.186.2
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>August, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-08/</link>
<pubDate>Sat, 03 Aug 2019 12:39:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-08/</guid>
<description>&lt;h2 id=&#34;2019-08-03&#34;&gt;2019-08-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Look at Bioversity&amp;rsquo;s latest migration CSV and now I see that Francesco has cleaned up the extra columns and the newline at the end of the file, but many of the column headers have an extra space in the name&amp;hellip;&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2019-08-04&#34;&gt;2019-08-04&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Deploy ORCID identifier updates requested by Bioversity to CGSpace&lt;/li&gt;
&lt;li&gt;Run system updates on CGSpace (linode18) and reboot it
&lt;ul&gt;
&lt;li&gt;Before updating it I checked Solr and verified that all statistics cores were loaded properly&amp;hellip;&lt;/li&gt;
&lt;li&gt;After rebooting, all statistics cores were loaded&amp;hellip; wow, that&amp;rsquo;s lucky.&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Run system updates on DSpace Test (linode19) and reboot it&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>July, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-07/</link>
<pubDate>Mon, 01 Jul 2019 12:13:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-07/</guid>
<description>&lt;h2 id=&#34;2019-07-01&#34;&gt;2019-07-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Create an &amp;ldquo;AfricaRice books and book chapters&amp;rdquo; collection on CGSpace for AfricaRice&lt;/li&gt;
&lt;li&gt;Last month Sisay asked why the following &amp;ldquo;most popular&amp;rdquo; statistics link for a range of months in 2018 works for the CIAT community on DSpace Test, but not on CGSpace:
&lt;ul&gt;
&lt;li&gt;&lt;a href=&#34;https://dspacetest.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;amp;time_filter_end_date=01%2F12%2F2018&#34;&gt;DSpace Test&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;&lt;a href=&#34;https://cgspace.cgiar.org/handle/10568/35697/most-popular/item#simplefilter=custom&amp;amp;time_filter_end_date=01%2F12%2F2018&#34;&gt;CGSpace&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Abenet had another similar issue a few days ago when trying to find the stats for 2018 in the RTB community&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>June, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-06/</link>
<pubDate>Sun, 02 Jun 2019 10:57:51 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-06/</guid>
<description>&lt;h2 id=&#34;2019-06-02&#34;&gt;2019-06-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Merge the &lt;a href=&#34;https://github.com/ilri/DSpace/pull/425&#34;&gt;Solr filterCache&lt;/a&gt; and &lt;a href=&#34;https://github.com/ilri/DSpace/pull/426&#34;&gt;XMLUI ISI journal&lt;/a&gt; changes to the &lt;code&gt;5_x-prod&lt;/code&gt; branch and deploy on CGSpace&lt;/li&gt;
&lt;li&gt;Run system updates on CGSpace (linode18) and reboot it&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2019-06-03&#34;&gt;2019-06-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Skype with Marie-Angélique and Abenet about &lt;a href=&#34;https://agriculturalsemantics.github.io/cg-core/cgcore.html&#34;&gt;CG Core v2&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>May, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-05/</link>
<pubDate>Wed, 01 May 2019 07:37:43 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-05/</guid>
<description>&lt;h2 id=&#34;2019-05-01&#34;&gt;2019-05-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Help CCAFS with regenerating some item thumbnails after they uploaded new PDFs to some items on CGSpace&lt;/li&gt;
&lt;li&gt;A user on the dspace-tech mailing list offered some suggestions for troubleshooting the problem with the inability to delete certain items
&lt;ul&gt;
&lt;li&gt;Apparently if the item is in the &lt;code&gt;workflowitem&lt;/code&gt; table it is submitted to a workflow&lt;/li&gt;
&lt;li&gt;And if it is in the &lt;code&gt;workspaceitem&lt;/code&gt; table it is in the pre-submitted state&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The item seems to be in a pre-submitted state, so I tried to delete it from there:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;dspace=# DELETE FROM workspaceitem WHERE item_id=74648;
DELETE 1
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;But after this I tried to delete the item from the XMLUI and it is &lt;em&gt;still&lt;/em&gt; present&amp;hellip;&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-04/</link>
<pubDate>Mon, 01 Apr 2019 09:00:43 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-04/</guid>
<description>&lt;h2 id=&#34;2019-04-01&#34;&gt;2019-04-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Meeting with AgroKnow to discuss CGSpace, ILRI data, AReS, GARDIAN, etc
&lt;ul&gt;
&lt;li&gt;They asked if we had plans to enable RDF support in CGSpace&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There have been 4,400 more downloads of the CTA Spore publication from those strange Amazon IP addresses today&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;I suspected that some might not be successful, because the stats show less, but today they were all HTTP 200!&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# cat /var/log/nginx/access.log /var/log/nginx/access.log.1 | grep &#39;Spore-192-EN-web.pdf&#39; | grep -E &#39;(18.196.196.108|18.195.78.144|18.195.218.6)&#39; | awk &#39;{print $9}&#39; | sort | uniq -c | sort -n | tail -n 5
4432 200
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;In the last two weeks there have been 47,000 downloads of this &lt;em&gt;same exact PDF&lt;/em&gt; by these three IP addresses&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Apply country and region corrections and deletions on DSpace Test and CGSpace:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-9-countries.csv -db dspace -u dspace -p &#39;fuuu&#39; -f cg.coverage.country -m 228 -t ACTION -d
$ ./fix-metadata-values.py -i /tmp/2019-02-21-fix-4-regions.csv -db dspace -u dspace -p &#39;fuuu&#39; -f cg.coverage.region -m 231 -t action -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-2-countries.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 228 -f cg.coverage.country -d
$ ./delete-metadata-values.py -i /tmp/2019-02-21-delete-1-region.csv -db dspace -u dspace -p &#39;fuuu&#39; -m 231 -f cg.coverage.region -d
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>March, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-03/</link>
<pubDate>Fri, 01 Mar 2019 12:16:30 +0100</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-03/</guid>
<description>&lt;h2 id=&#34;2019-03-01&#34;&gt;2019-03-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I checked IITA&amp;rsquo;s 259 Feb 14 records from last month for duplicates using Atmire&amp;rsquo;s Duplicate Checker on a fresh snapshot of CGSpace on my local machine and everything looks good&lt;/li&gt;
&lt;li&gt;I am now only waiting to hear from her about where the items should go, though I assume Journal Articles go to IITA Journal Articles collection, etc&amp;hellip;&lt;/li&gt;
&lt;li&gt;Looking at the other half of Udana&amp;rsquo;s WLE records from 2018-11
&lt;ul&gt;
&lt;li&gt;I finished the ones for Restoring Degraded Landscapes (RDL), but these are for Variability, Risks and Competing Uses (VRC)&lt;/li&gt;
&lt;li&gt;I did the usual cleanups for whitespace, added regions where they made sense for certain countries, cleaned up the DOI link formats, added rights information based on the publications page for a few items&lt;/li&gt;
&lt;li&gt;Most worryingly, there are encoding errors in the abstracts for eleven items, for example:&lt;/li&gt;
&lt;li&gt;68.15% <20> 9.45 instead of 68.15% ± 9.45&lt;/li&gt;
&lt;li&gt;2003<EFBFBD>2013 instead of 2003–2013&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;I think I will need to ask Udana to re-copy and paste the abstracts with more care using Google Docs&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>February, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-02/</link>
<pubDate>Fri, 01 Feb 2019 21:37:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-02/</guid>
<description>&lt;h2 id=&#34;2019-02-01&#34;&gt;2019-02-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode has alerted a few times since last night that the CPU usage on CGSpace (linode18) was high despite me increasing the alert threshold last week from 250% to 275%—I might need to increase it again!&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The top IPs before, during, and after this latest alert tonight were:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;01/Feb/2019:(17|18|19|20|21)&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
245 207.46.13.5
332 54.70.40.11
385 5.143.231.38
405 207.46.13.173
405 207.46.13.75
1117 66.249.66.219
1121 35.237.175.180
1546 5.9.6.51
2474 45.5.186.2
5490 85.25.237.71
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;&lt;code&gt;85.25.237.71&lt;/code&gt; is the &amp;ldquo;Linguee Bot&amp;rdquo; that I first saw last month&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The Solr statistics the past few months have been very high and I was wondering if the web server logs also showed an increase&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There were just over 3 million accesses in the nginx logs last month:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# time zcat --force /var/log/nginx/* | grep -cE &amp;quot;[0-9]{1,2}/Jan/2019&amp;quot;
3018243
real 0m19.873s
user 0m22.203s
sys 0m1.979s
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>January, 2019</title>
<link>https://alanorth.github.io/cgspace-notes/2019-01/</link>
<pubDate>Wed, 02 Jan 2019 09:48:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2019-01/</guid>
<description>&lt;h2 id=&#34;2019-01-02&#34;&gt;2019-01-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I don&amp;rsquo;t see anything interesting in the web server logs around that time though:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &amp;quot;02/Jan/2019:0(1|2|3)&amp;quot; | awk &#39;{print $1}&#39; | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>December, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-12/</link>
<pubDate>Sun, 02 Dec 2018 02:09:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-12/</guid>
<description>&lt;h2 id=&#34;2018-12-01&#34;&gt;2018-12-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK&lt;/li&gt;
&lt;li&gt;I manually installed OpenJDK, then removed Oracle JDK, then re-ran the &lt;a href=&#34;http://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible playbook&lt;/a&gt; to update all configuration files, etc&lt;/li&gt;
&lt;li&gt;Then I ran all system updates and restarted the server&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2018-12-02&#34;&gt;2018-12-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another &lt;a href=&#34;https://usn.ubuntu.com/3831-1/&#34;&gt;Ghostscript vulnerability last week&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>November, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-11/</link>
<pubDate>Thu, 01 Nov 2018 16:41:30 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-11/</guid>
<description>&lt;h2 id=&#34;2018-11-01&#34;&gt;2018-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Finalize AReS Phase I and Phase II ToRs&lt;/li&gt;
&lt;li&gt;Send a note about my &lt;a href=&#34;https://github.com/ilri/dspace-statistics-api&#34;&gt;dspace-statistics-api&lt;/a&gt; to the dspace-tech mailing list&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2018-11-03&#34;&gt;2018-11-03&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage&lt;/li&gt;
&lt;li&gt;Today these are the top 10 IPs:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>October, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-10/</link>
<pubDate>Mon, 01 Oct 2018 22:31:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-10/</guid>
<description>&lt;h2 id=&#34;2018-10-01&#34;&gt;2018-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items&lt;/li&gt;
&lt;li&gt;I created a GitHub issue to track this &lt;a href=&#34;https://github.com/ilri/DSpace/issues/389&#34;&gt;#389&lt;/a&gt;, because I&amp;rsquo;m super busy in Nairobi right now&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>September, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-09/</link>
<pubDate>Sun, 02 Sep 2018 09:55:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-09/</guid>
<description>&lt;h2 id=&#34;2018-09-02&#34;&gt;2018-09-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;New &lt;a href=&#34;https://jdbc.postgresql.org/documentation/changelog.html#version_42.2.5&#34;&gt;PostgreSQL JDBC driver version 42.2.5&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;I&amp;rsquo;ll update the DSpace role in our &lt;a href=&#34;https://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible infrastructure playbooks&lt;/a&gt; and run the updated playbooks on CGSpace and DSpace Test&lt;/li&gt;
&lt;li&gt;Also, I&amp;rsquo;ll re-run the &lt;code&gt;postgresql&lt;/code&gt; tasks because the custom PostgreSQL variables are dynamic according to the system&amp;rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month&lt;/li&gt;
&lt;li&gt;I&amp;rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&amp;rsquo;m getting those autowire errors in Tomcat 8.5.30 again:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>August, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-08/</link>
<pubDate>Wed, 01 Aug 2018 11:52:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-08/</guid>
<description>&lt;h2 id=&#34;2018-08-01&#34;&gt;2018-08-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;DSpace Test had crashed at some point yesterday morning and I see the following in &lt;code&gt;dmesg&lt;/code&gt;:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;[Tue Jul 31 00:00:41 2018] Out of memory: Kill process 1394 (java) score 668 or sacrifice child
[Tue Jul 31 00:00:41 2018] Killed process 1394 (java) total-vm:15601860kB, anon-rss:5355528kB, file-rss:0kB, shmem-rss:0kB
[Tue Jul 31 00:00:41 2018] oom_reaper: reaped process 1394 (java), now anon-rss:0kB, file-rss:0kB, shmem-rss:0kB
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Judging from the time of the crash it was probably related to the Discovery indexing that starts at midnight&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;From the DSpace log I see that eventually Solr stopped responding, so I guess the &lt;code&gt;java&lt;/code&gt; process that was OOM killed above was Tomcat&amp;rsquo;s&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I&amp;rsquo;m not sure why Tomcat didn&amp;rsquo;t crash with an OutOfMemoryError&amp;hellip;&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Anyways, perhaps I should increase the JVM heap from 5120m to 6144m like we did a few months ago when we tried to run the whole CGSpace Solr core&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;The server only has 8GB of RAM so we&amp;rsquo;ll eventually need to upgrade to a larger one because we&amp;rsquo;ll start starving the OS, PostgreSQL, and command line batch processes&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I ran all system updates on DSpace Test and rebooted it&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>July, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-07/</link>
<pubDate>Sun, 01 Jul 2018 12:56:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-07/</guid>
<description>&lt;h2 id=&#34;2018-07-01&#34;&gt;2018-07-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;I want to upgrade DSpace Test to DSpace 5.8 so I took a backup of its current database just in case:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ pg_dump -b -v -o --format=custom -U dspace -f dspace-2018-07-01.backup dspace
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;During the &lt;code&gt;mvn package&lt;/code&gt; stage on the 5.8 branch I kept getting issues with java running out of memory:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;There is insufficient memory for the Java Runtime Environment to continue.
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>June, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-06/</link>
<pubDate>Mon, 04 Jun 2018 19:49:54 -0700</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-06/</guid>
<description>&lt;h2 id=&#34;2018-06-04&#34;&gt;2018-06-04&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Test the &lt;a href=&#34;https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=560&#34;&gt;DSpace 5.8 module upgrades from Atmire&lt;/a&gt; (&lt;a href=&#34;https://github.com/ilri/DSpace/pull/378&#34;&gt;#378&lt;/a&gt;)
&lt;ul&gt;
&lt;li&gt;There seems to be a problem with the CUA and L&amp;amp;R versions in &lt;code&gt;pom.xml&lt;/code&gt; because they are using SNAPSHOT and it doesn&amp;rsquo;t build&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;I added the new CCAFS Phase II Project Tag &lt;code&gt;PII-FP1_PACCA2&lt;/code&gt; and merged it into the &lt;code&gt;5_x-prod&lt;/code&gt; branch (&lt;a href=&#34;https://github.com/ilri/DSpace/pull/379&#34;&gt;#379&lt;/a&gt;)&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I proofed and tested the ILRI author corrections that Peter sent back to me this week:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ ./fix-metadata-values.py -i /tmp/2018-05-30-Correct-660-authors.csv -db dspace -u dspace -p &#39;fuuu&#39; -f dc.contributor.author -t correct -m 3 -n
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I think a sane proofing workflow in OpenRefine is to apply the custom text facets for check/delete/remove and illegal characters that I developed in &lt;a href=&#34;https://alanorth.github.io/cgspace-notes/cgspace-notes/2018-03/&#34;&gt;March, 2018&lt;/a&gt;&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Time to index ~70,000 items on CGSpace:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ time schedtool -D -e ionice -c2 -n7 nice -n19 [dspace]/bin/dspace index-discovery -b
real 74m42.646s
user 8m5.056s
sys 2m7.289s
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>May, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-05/</link>
<pubDate>Tue, 01 May 2018 16:43:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-05/</guid>
<description>&lt;h2 id=&#34;2018-05-01&#34;&gt;2018-05-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface:
&lt;ul&gt;
&lt;li&gt;&lt;a href=&#34;http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E&#34;&gt;http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E&lt;/a&gt;&lt;/li&gt;
&lt;li&gt;&lt;a href=&#34;http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E&#34;&gt;http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;&lt;/li&gt;
&lt;li&gt;Then I reduced the JVM heap size from 6144 back to 5120m&lt;/li&gt;
&lt;li&gt;Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the &lt;a href=&#34;https://github.com/ilri/rmg-ansible-public&#34;&gt;Ansible infrastructure scripts&lt;/a&gt; to support hosts choosing which distribution they want to use&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>April, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-04/</link>
<pubDate>Sun, 01 Apr 2018 16:13:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-04/</guid>
<description>&lt;h2 id=&#34;2018-04-01&#34;&gt;2018-04-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;I tried to test something on DSpace Test but noticed that it&amp;rsquo;s down since god knows when&lt;/li&gt;
&lt;li&gt;Catalina logs at least show some memory errors yesterday:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>March, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-03/</link>
<pubDate>Fri, 02 Mar 2018 16:07:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-03/</guid>
<description>&lt;h2 id=&#34;2018-03-02&#34;&gt;2018-03-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Export a CSV of the IITA community metadata for Martin Mueller&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>February, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-02/</link>
<pubDate>Thu, 01 Feb 2018 16:28:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-02/</guid>
<description>&lt;h2 id=&#34;2018-02-01&#34;&gt;2018-02-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Peter gave feedback on the &lt;code&gt;dc.rights&lt;/code&gt; proof of concept that I had sent him last week&lt;/li&gt;
&lt;li&gt;We don&amp;rsquo;t need to distinguish between internal and external works, so that makes it just a simple list&lt;/li&gt;
&lt;li&gt;Yesterday I figured out how to monitor DSpace sessions using JMX&lt;/li&gt;
&lt;li&gt;I copied the logic in the &lt;code&gt;jmx_tomcat_dbpools&lt;/code&gt; provided by Ubuntu&amp;rsquo;s &lt;code&gt;munin-plugins-java&lt;/code&gt; package and used the stuff I discovered about JMX &lt;a href=&#34;https://alanorth.github.io/cgspace-notes/cgspace-notes/2018-01/&#34;&gt;in 2018-01&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>January, 2018</title>
<link>https://alanorth.github.io/cgspace-notes/2018-01/</link>
<pubDate>Tue, 02 Jan 2018 08:35:54 -0800</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2018-01/</guid>
<description>&lt;h2 id=&#34;2018-01-02&#34;&gt;2018-01-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time&lt;/li&gt;
&lt;li&gt;I didn&amp;rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&amp;rsquo;t show anything out of the ordinary&lt;/li&gt;
&lt;li&gt;The nginx logs show HTTP 200s until &lt;code&gt;02/Jan/2018:11:27:17 +0000&lt;/code&gt; when Uptime Robot got an HTTP 500&lt;/li&gt;
&lt;li&gt;In dspace.log around that time I see many errors like &amp;ldquo;Client closed the connection before file download was complete&amp;rdquo;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;And just before that I see this:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000].
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Ah hah! So the pool was actually empty!&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I need to increase that, let&amp;rsquo;s try to bump it up from 50 to 75&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&amp;rsquo;t know what the hell Uptime Robot saw&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;I notice this error quite a few times in dspace.log:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse &#39;dateIssued_keyword:[1976+TO+1979]&#39;: Encountered &amp;quot; &amp;quot;]&amp;quot; &amp;quot;] &amp;quot;&amp;quot; at line 1, column 32.
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;And there are many of these errors every day for the past month:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;$ grep -c &amp;quot;Error while searching for sidebar facets&amp;quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&amp;rsquo;s Encrypt if it&amp;rsquo;s just a handful of domains&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>December, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-12/</link>
<pubDate>Fri, 01 Dec 2017 13:53:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-12/</guid>
<description>&lt;h2 id=&#34;2017-12-01&#34;&gt;2017-12-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;Uptime Robot noticed that CGSpace went down&lt;/li&gt;
&lt;li&gt;The logs say &amp;ldquo;Timeout waiting for idle object&amp;rdquo;&lt;/li&gt;
&lt;li&gt;PostgreSQL activity says there are 115 connections currently&lt;/li&gt;
&lt;li&gt;The list of connections to XMLUI and REST API for today:&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>November, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-11/</link>
<pubDate>Thu, 02 Nov 2017 09:37:54 +0200</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-11/</guid>
<description>&lt;h2 id=&#34;2017-11-01&#34;&gt;2017-11-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;The CORE developers responded to say they are looking into their bot not respecting our robots.txt&lt;/li&gt;
&lt;/ul&gt;
&lt;h2 id=&#34;2017-11-02&#34;&gt;2017-11-02&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;Today there have been no hits by CORE and no alerts from Linode (coincidence?)&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;# grep -c &amp;quot;CORE&amp;quot; /var/log/nginx/access.log
0
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Generate list of authors on CGSpace for Peter to go through and correct:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = &#39;contributor&#39; and qualifier = &#39;author&#39;) AND resource_type_id = 2 group by text_value order by count desc) to /tmp/authors.csv with csv;
COPY 54701
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item>
<title>October, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-10/</link>
<pubDate>Sun, 01 Oct 2017 08:07:54 +0300</pubDate>
<guid>https://alanorth.github.io/cgspace-notes/2017-10/</guid>
<description>&lt;h2 id=&#34;2017-10-01&#34;&gt;2017-10-01&lt;/h2&gt;
&lt;ul&gt;
&lt;li&gt;&lt;p&gt;Peter emailed to point out that many items in the &lt;a href=&#34;https://cgspace.cgiar.org/handle/10568/2703&#34;&gt;ILRI archive collection&lt;/a&gt; have multiple handles:&lt;/p&gt;
&lt;pre&gt;&lt;code&gt;http://hdl.handle.net/10568/78495||http://hdl.handle.net/10568/79336
&lt;/code&gt;&lt;/pre&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;There appears to be a pattern but I&amp;rsquo;ll have to look a bit closer and try to clean them up automatically, either in SQL or in OpenRefine&lt;/p&gt;&lt;/li&gt;
&lt;li&gt;&lt;p&gt;Add Katherine Lutz to the groups for content submission and edit steps of the CGIAR System collections&lt;/p&gt;&lt;/li&gt;
&lt;/ul&gt;</description>
</item>
<item> <item>
<title>September, 2017</title> <title>September, 2017</title>
<link>https://alanorth.github.io/cgspace-notes/2017-09/</link> <link>https://alanorth.github.io/cgspace-notes/2017-09/</link>

404
docs/tags/notes/page/2/index.html
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2017-09-07T16:54:52+07:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -78,27 +78,21 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-11/">November, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-11-01T09:21:00&#43;03:00">Tue Nov 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-12-01">2018-12-01</h2> <h2 id="2016-11-01">2016-11-01</h2>
<ul> <ul>
<li>Switch CGSpace (linode18) to use OpenJDK instead of Oracle JDK</li> <li>Add <code>dc.type</code> to the output options for Atmire&rsquo;s Listings and Reports module (<a href="https://github.com/ilri/DSpace/pull/286">#286</a>)</li>
<li>I manually installed OpenJDK, then removed Oracle JDK, then re-ran the <a href="http://github.com/ilri/rmg-ansible-public">Ansible playbook</a> to update all configuration files, etc</li>
<li>Then I ran all system updates and restarted the server</li>
</ul> </ul>
<h2 id="2018-12-02">2018-12-02</h2> <p><img src="/cgspace-notes/2016/11/listings-and-reports.png" alt="Listings and Reports with output type" /></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-11/'>Read more →</a>
<ul>
<li>I noticed that there is another issue with PDF thumbnails on CGSpace, and I see there was another <a href="https://usn.ubuntu.com/3831-1/">Ghostscript vulnerability last week</a></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-12/'>Read more →</a>
</article> </article>
@ -108,187 +102,30 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-11-01">2018-11-01</h2> <h2 id="2016-10-03">2016-10-03</h2>
<ul> <ul>
<li>Finalize AReS Phase I and Phase II ToRs</li> <li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Send a note about my <a href="https://github.com/ilri/dspace-statistics-api">dspace-statistics-api</a> to the dspace-tech mailing list</li> <li>Need to test the following scenarios to see how author order is affected:
</ul>
<h2 id="2018-11-03">2018-11-03</h2>
<ul> <ul>
<li>Linode has been sending mails a few times a day recently that CGSpace (linode18) has had high CPU usage</li> <li>ORCIDs only</li>
<li>Today these are the top 10 IPs:</li> <li>ORCIDs plus normal authors</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-11/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-10-01">2018-10-01</h2>
<ul>
<li>Phil Thornton got an ORCID identifier so we need to add it to the list on CGSpace and tag his existing items</li>
<li>I created a GitHub issue to track this <a href="https://github.com/ilri/DSpace/issues/389">#389</a>, because I&rsquo;m super busy in Nairobi right now</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-10/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-09-02">2018-09-02</h2>
<ul>
<li>New <a href="https://jdbc.postgresql.org/documentation/changelog.html#version_42.2.5">PostgreSQL JDBC driver version 42.2.5</a></li>
<li>I&rsquo;ll update the DSpace role in our <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure playbooks</a> and run the updated playbooks on CGSpace and DSpace Test</li>
<li>Also, I&rsquo;ll re-run the <code>postgresql</code> tasks because the custom PostgreSQL variables are dynamic according to the system&rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month</li>
<li>I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&rsquo;m getting those autowire errors in Tomcat 8.5.30 again:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-09/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-08-01">2018-08-01</h2>
<ul>
<li><p>DSpace Test had crashed at some point yesterday morning and I see the following in <code>dmesg</code>:</p>
<pre><code>[Tue Jul 31 00:00:41 2018] Out of memory: Kill process 1394 (java) score 668 or sacrifice child
[Tue Jul 31 00:00:41 2018] Killed process 1394 (java) total-vm:15601860kB, anon-rss:5355528kB, file-rss:0kB, shmem-rss:0kB
[Tue Jul 31 00:00:41 2018] oom_reaper: reaped process 1394 (java), now anon-rss:0kB, file-rss:0kB, shmem-rss:0kB
</code></pre></li>
<li><p>Judging from the time of the crash it was probably related to the Discovery indexing that starts at midnight</p></li>
<li><p>From the DSpace log I see that eventually Solr stopped responding, so I guess the <code>java</code> process that was OOM killed above was Tomcat&rsquo;s</p></li>
<li><p>I&rsquo;m not sure why Tomcat didn&rsquo;t crash with an OutOfMemoryError&hellip;</p></li>
<li><p>Anyways, perhaps I should increase the JVM heap from 5120m to 6144m like we did a few months ago when we tried to run the whole CGSpace Solr core</p></li>
<li><p>The server only has 8GB of RAM so we&rsquo;ll eventually need to upgrade to a larger one because we&rsquo;ll start starving the OS, PostgreSQL, and command line batch processes</p></li>
<li><p>I ran all system updates on DSpace Test and rebooted it</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-08/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-07-01">2018-07-01</h2>
<ul>
<li><p>I want to upgrade DSpace Test to DSpace 5.8 so I took a backup of its current database just in case:</p>
<pre><code>$ pg_dump -b -v -o --format=custom -U dspace -f dspace-2018-07-01.backup dspace
</code></pre></li>
<li><p>During the <code>mvn package</code> stage on the 5.8 branch I kept getting issues with java running out of memory:</p>
<pre><code>There is insufficient memory for the Java Runtime Environment to continue.
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-07/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-06-04">2018-06-04</h2>
<ul>
<li>Test the <a href="https://tracker.atmire.com/tickets-cgiar-ilri/view-ticket?id=560">DSpace 5.8 module upgrades from Atmire</a> (<a href="https://github.com/ilri/DSpace/pull/378">#378</a>)
<ul>
<li>There seems to be a problem with the CUA and L&amp;R versions in <code>pom.xml</code> because they are using SNAPSHOT and it doesn&rsquo;t build</li>
</ul></li> </ul></li>
<li>I added the new CCAFS Phase II Project Tag <code>PII-FP1_PACCA2</code> and merged it into the <code>5_x-prod</code> branch (<a href="https://github.com/ilri/DSpace/pull/379">#379</a>)</li>
<li><p>I proofed and tested the ILRI author corrections that Peter sent back to me this week:</p> <li><p>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</p>
<pre><code>$ ./fix-metadata-values.py -i /tmp/2018-05-30-Correct-660-authors.csv -db dspace -u dspace -p 'fuuu' -f dc.contributor.author -t correct -m 3 -n <pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre></li>
<li><p>I think a sane proofing workflow in OpenRefine is to apply the custom text facets for check/delete/remove and illegal characters that I developed in <a href="/cgspace-notes/2018-03/">March, 2018</a></p></li>
<li><p>Time to index ~70,000 items on CGSpace:</p>
<pre><code>$ time schedtool -D -e ionice -c2 -n7 nice -n19 [dspace]/bin/dspace index-discovery -b
real 74m42.646s
user 8m5.056s
sys 2m7.289s
</code></pre></li> </code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-06/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
</article> </article>
@ -298,26 +135,26 @@ sys 2m7.289s
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-09-01T15:53:00&#43;03:00">Thu Sep 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-05-01">2018-05-01</h2> <h2 id="2016-09-01">2016-09-01</h2>
<ul> <ul>
<li>I cleared the Solr statistics core on DSpace Test by issuing two commands directly to the Solr admin interface: <li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
<li>Discuss how the migration of CGIAR&rsquo;s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
<ul> <li><p>It looks like we might be able to use OUs now, instead of DCs:</p>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Cdelete%3E%3Cquery%3E*:*%3C/query%3E%3C/delete%3E</a></li>
<li><a href="http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E">http://localhost:3000/solr/statistics/update?stream.body=%3Ccommit/%3E</a></li> <pre><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=org&quot; -D &quot;admigration1@cgiarad.org&quot; -W &quot;(sAMAccountName=admigration1)&quot;
</ul></li> </code></pre></li>
<li>Then I reduced the JVM heap size from 6144 back to 5120m</li>
<li>Also, I switched it to use OpenJDK instead of Oracle Java, as well as re-worked the <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure scripts</a> to support hosts choosing which distribution they want to use</li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-05/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
</article> </article>
@ -327,20 +164,30 @@ sys 2m7.289s
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-04-01">2018-04-01</h2> <h2 id="2016-08-01">2016-08-01</h2>
<ul> <ul>
<li>I tried to test something on DSpace Test but noticed that it&rsquo;s down since god knows when</li> <li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Catalina logs at least show some memory errors yesterday:</li> <li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-04/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article> </article>
@ -350,19 +197,168 @@ sys 2m7.289s
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-07-01T10:53:00&#43;03:00">Fri Jul 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-03-02">2018-03-02</h2> <h2 id="2016-07-01">2016-07-01</h2>
<ul> <ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li> <li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
<li><p>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</p>
<pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
UPDATE 95
dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
text_value
------------
(0 rows)
</code></pre></li>
<li><p>In this case the select query was showing 95 results before the update</p></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-05-01T23:06:00&#43;03:00">Sun May 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-05-01">2016-05-01</h2>
<ul>
<li>Since yesterday there have been 10,000 REST errors and the site has been unstable again</li>
<li>I have blocked access to the API now</li>
<li><p>There are 3,000 IPs accessing the REST API in a 24-hour period!</p>
<pre><code># awk '{print $1}' /var/log/nginx/rest.log | uniq | wc -l
3168
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00&#43;03:00">Mon Apr 04, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-04-04">2016-04-04</h2>
<ul>
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
<li>After running DSpace for over five years I&rsquo;ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
<li>This will save us a few gigs of backup space we&rsquo;re paying for on S3</li>
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-03/">March, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-03-02T16:50:00&#43;03:00">Wed Mar 02, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-03-02">2016-03-02</h2>
<ul>
<li>Looking at issues with author authorities on CGSpace</li>
<li>For some reason we still have the <code>index-lucene-update</code> cron job active on CGSpace, but I&rsquo;m pretty sure we don&rsquo;t need it as of the latest few versions of Atmire&rsquo;s Listings and Reports module</li>
<li>Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Java JDK 1.7 to match environment on CGSpace server</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-03/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-02/">February, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-02-05T13:18:00&#43;03:00">Fri Feb 05, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-02-05">2016-02-05</h2>
<ul>
<li>Looking at some DAGRIS data for Abenet Yabowork</li>
<li>Lots of issues with spaces, newlines, etc causing the import to fail</li>
<li>I noticed we have a very <em>interesting</em> list of countries on CGSpace:</li>
</ul>
<p><img src="/cgspace-notes/2016/02/cgspace-countries.png" alt="CGSpace country list" /></p>
<ul>
<li>Not only are there 49,000 countries, we have some blanks (25)&hellip;</li>
<li>Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&rdquo;</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-02/'>Read more →</a>
</article> </article>
@ -393,6 +389,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -401,8 +399,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

325
docs/tags/notes/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/notes/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2017-09-07T16:54:52+07:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Notes"/> <meta name="twitter:title" content="Notes"/>
@ -78,22 +78,21 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-01/">January, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2016-01-13T13:18:00&#43;03:00">Wed Jan 13, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-02-01">2018-02-01</h2> <h2 id="2016-01-13">2016-01-13</h2>
<ul> <ul>
<li>Peter gave feedback on the <code>dc.rights</code> proof of concept that I had sent him last week</li> <li>Move ILRI collection <code>10568/12503</code> from <code>10568/27869</code> to <code>10568/27629</code> using the <a href="https://gist.github.com/alanorth/392c4660e8b022d99dfa">move_collections.sh</a> script I wrote last year.</li>
<li>We don&rsquo;t need to distinguish between internal and external works, so that makes it just a simple list</li> <li>I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.</li>
<li>Yesterday I figured out how to monitor DSpace sessions using JMX</li> <li>Update GitHub wiki for documentation of <a href="https://github.com/ilri/DSpace/wiki/Maintenance-Tasks">maintenance tasks</a>.</li>
<li>I copied the logic in the <code>jmx_tomcat_dbpools</code> provided by Ubuntu&rsquo;s <code>munin-plugins-java</code> package and used the stuff I discovered about JMX <a href="/cgspace-notes/2018-01/">in 2018-01</a></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-02/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2016-01/'>Read more →</a>
</article> </article>
@ -103,152 +102,26 @@
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2018-01-02">2018-01-02</h2> <h2 id="2015-12-02">2015-12-02</h2>
<ul> <ul>
<li>Uptime Robot noticed that CGSpace went down and up a few times last night, for a few minutes each time</li> <li><p>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</p>
<li>I didn&rsquo;t get any load alerts from Linode and the REST and XMLUI logs don&rsquo;t show anything out of the ordinary</li>
<li>The nginx logs show HTTP 200s until <code>02/Jan/2018:11:27:17 +0000</code> when Uptime Robot got an HTTP 500</li>
<li>In dspace.log around that time I see many errors like &ldquo;Client closed the connection before file download was complete&rdquo;</li>
<li><p>And just before that I see this:</p> <pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
<pre><code>Caused by: org.apache.tomcat.jdbc.pool.PoolExhaustedException: [http-bio-127.0.0.1-8443-exec-980] Timeout: Pool empty. Unable to fetch a connection in 5 seconds, none available[size:50; busy:50; idle:0; lastwait:5000]. -rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
</code></pre></li> -rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
<li><p>Ah hah! So the pool was actually empty!</p></li>
<li><p>I need to increase that, let&rsquo;s try to bump it up from 50 to 75</p></li>
<li><p>After that one client got an HTTP 499 but then the rest were HTTP 200, so I don&rsquo;t know what the hell Uptime Robot saw</p></li>
<li><p>I notice this error quite a few times in dspace.log:</p>
<pre><code>2018-01-02 01:21:19,137 ERROR org.dspace.app.xmlui.aspect.discovery.SidebarFacetsTransformer @ Error while searching for sidebar facets
org.dspace.discovery.SearchServiceException: org.apache.solr.search.SyntaxError: Cannot parse 'dateIssued_keyword:[1976+TO+1979]': Encountered &quot; &quot;]&quot; &quot;] &quot;&quot; at line 1, column 32.
</code></pre></li>
<li><p>And there are many of these errors every day for the past month:</p>
<pre><code>$ grep -c &quot;Error while searching for sidebar facets&quot; dspace.log.*
dspace.log.2017-11-21:4
dspace.log.2017-11-22:1
dspace.log.2017-11-23:4
dspace.log.2017-11-24:11
dspace.log.2017-11-25:0
dspace.log.2017-11-26:1
dspace.log.2017-11-27:7
dspace.log.2017-11-28:21
dspace.log.2017-11-29:31
dspace.log.2017-11-30:15
dspace.log.2017-12-01:15
dspace.log.2017-12-02:20
dspace.log.2017-12-03:38
dspace.log.2017-12-04:65
dspace.log.2017-12-05:43
dspace.log.2017-12-06:72
dspace.log.2017-12-07:27
dspace.log.2017-12-08:15
dspace.log.2017-12-09:29
dspace.log.2017-12-10:35
dspace.log.2017-12-11:20
dspace.log.2017-12-12:44
dspace.log.2017-12-13:36
dspace.log.2017-12-14:59
dspace.log.2017-12-15:104
dspace.log.2017-12-16:53
dspace.log.2017-12-17:66
dspace.log.2017-12-18:83
dspace.log.2017-12-19:101
dspace.log.2017-12-20:74
dspace.log.2017-12-21:55
dspace.log.2017-12-22:66
dspace.log.2017-12-23:50
dspace.log.2017-12-24:85
dspace.log.2017-12-25:62
dspace.log.2017-12-26:49
dspace.log.2017-12-27:30
dspace.log.2017-12-28:54
dspace.log.2017-12-29:68
dspace.log.2017-12-30:89
dspace.log.2017-12-31:53
dspace.log.2018-01-01:45
dspace.log.2018-01-02:34
</code></pre></li>
<li><p>Danny wrote to ask for help renewing the wildcard ilri.org certificate and I advised that we should probably use Let&rsquo;s Encrypt if it&rsquo;s just a handful of domains</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-01/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-12-01">2017-12-01</h2>
<ul>
<li>Uptime Robot noticed that CGSpace went down</li>
<li>The logs say &ldquo;Timeout waiting for idle object&rdquo;</li>
<li>PostgreSQL activity says there are 115 connections currently</li>
<li>The list of connections to XMLUI and REST API for today:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-12/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-11-01">2017-11-01</h2>
<ul>
<li>The CORE developers responded to say they are looking into their bot not respecting our robots.txt</li>
</ul>
<h2 id="2017-11-02">2017-11-02</h2>
<ul>
<li><p>Today there have been no hits by CORE and no alerts from Linode (coincidence?)</p>
<pre><code># grep -c &quot;CORE&quot; /var/log/nginx/access.log
0
</code></pre></li>
<li><p>Generate list of authors on CGSpace for Peter to go through and correct:</p>
<pre><code>dspace=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = 'contributor' and qualifier = 'author') AND resource_type_id = 2 group by text_value order by count desc) to /tmp/authors.csv with csv;
COPY 54701
</code></pre></li> </code></pre></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-11/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article> </article>
@ -258,160 +131,26 @@ COPY 54701
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2015-11-23T17:00:57&#43;03:00">Mon Nov 23, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a> <i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
<h2 id="2017-10-01">2017-10-01</h2> <h2 id="2015-11-22">2015-11-22</h2>
<ul> <ul>
<li><p>Peter emailed to point out that many items in the <a href="https://cgspace.cgiar.org/handle/10568/2703">ILRI archive collection</a> have multiple handles:</p> <li>CGSpace went down</li>
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
<pre><code>http://hdl.handle.net/10568/78495||http://hdl.handle.net/10568/79336 <li><p>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</p>
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
78
</code></pre></li> </code></pre></li>
<li><p>There appears to be a pattern but I&rsquo;ll have to look a bit closer and try to clean them up automatically, either in SQL or in OpenRefine</p></li>
<li><p>Add Katherine Lutz to the groups for content submission and edit steps of the CGIAR System collections</p></li>
</ul> </ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-10/'>Read more →</a> <a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-09/">September, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-09-07T16:54:52&#43;07:00">Thu Sep 07, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-09-06">2017-09-06</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 261% CPU for the past two hours</li>
</ul>
<h2 id="2017-09-07">2017-09-07</h2>
<ul>
<li>Ask Sisay to clean up the WLE approvers a bit, as Marianne&rsquo;s user account is both in the approvers step as well as the group</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-09/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-08/">August, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-08-01T11:51:52&#43;03:00">Tue Aug 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-08-01">2017-08-01</h2>
<ul>
<li>Linode sent an alert that CGSpace (linode18) was using 350% CPU for the past two hours</li>
<li>I looked in the Activity pane of the Admin Control Panel and it seems that Google, Baidu, Yahoo, and Bing are all crawling with massive numbers of bots concurrently (~100 total, mostly Baidu and Google)</li>
<li>The good thing is that, according to <code>dspace.log.2017-08-01</code>, they are all using the same Tomcat session</li>
<li>This means our Tomcat Crawler Session Valve is working</li>
<li>But many of the bots are browsing dynamic URLs like:
<ul>
<li>/handle/10568/3353/discover</li>
<li>/handle/10568/16510/browse</li>
</ul></li>
<li>The <code>robots.txt</code> only blocks the top-level <code>/discover</code> and <code>/browse</code> URLs&hellip; we will need to find a way to forbid them from accessing these!</li>
<li>Relevant issue from DSpace Jira (semi resolved in DSpace 6.0): <a href="https://jira.duraspace.org/browse/DS-2962">https://jira.duraspace.org/browse/DS-2962</a></li>
<li>It turns out that we&rsquo;re already adding the <code>X-Robots-Tag &quot;none&quot;</code> HTTP header, but this only forbids the search engine from <em>indexing</em> the page, not crawling it!</li>
<li>Also, the bot has to successfully browse the page first so it can receive the HTTP header&hellip;</li>
<li>We might actually have to <em>block</em> these requests with HTTP 403 depending on the user agent</li>
<li>Abenet pointed out that the CGIAR Library Historical Archive collection I sent July 20th only had ~100 entries, instead of 2415</li>
<li>This was due to newline characters in the <code>dc.description.abstract</code> column, which caused OpenRefine to choke when exporting the CSV</li>
<li>I exported a new CSV from the collection on DSpace Test and then manually removed the characters in vim using <code>g/^$/d</code></li>
<li>Then I cleaned up the author authorities and HTML characters in OpenRefine and sent the file back to Abenet</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-08/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-07/">July, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-07-01T18:03:52&#43;03:00">Sat Jul 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-07-01">2017-07-01</h2>
<ul>
<li>Run system updates and reboot DSpace Test</li>
</ul>
<h2 id="2017-07-04">2017-07-04</h2>
<ul>
<li>Merge changes for WLE Phase II theme rename (<a href="https://github.com/ilri/DSpace/pull/329">#329</a>)</li>
<li>Looking at extracting the metadata registries from ICARDA&rsquo;s MEL DSpace database so we can compare fields with CGSpace</li>
<li>We can use PostgreSQL&rsquo;s extended output format (<code>-x</code>) plus <code>sed</code> to format the output into quasi XML:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-07/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-05-01T16:21:52&#43;02:00">Mon May 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace.
<a href='https://alanorth.github.io/cgspace-notes/2017-05/'>Read more →</a>
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@ -420,9 +159,9 @@ COPY 54701
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<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
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@ -450,8 +191,6 @@ COPY 54701
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<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-04/">April, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-04-02T17:08:52&#43;02:00">Sun Apr 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-04-02">2017-04-02</h2>
<ul>
<li>Merge one change to CCAFS flagships that I had forgotten to remove last month (&ldquo;MANAGING CLIMATE RISK&rdquo;): <a href="https://github.com/ilri/DSpace/pull/317">https://github.com/ilri/DSpace/pull/317</a></li>
<li>Quick proof-of-concept hack to add <code>dc.rights</code> to the input form, including some inline instructions/hints:</li>
</ul>
<p><img src="/cgspace-notes/2017/04/dc-rights.png" alt="dc.rights in the submission form" /></p>
<ul>
<li>Remove redundant/duplicate text in the DSpace submission license</li>
<li><p>Testing the CMYK patch on a collection with 650 items:</p>
<pre><code>$ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Thumbnail&quot; -v &gt;&amp; /tmp/filter-media-cmyk.txt
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-04/'>Read more →</a>
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<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-03/">March, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-03-01T17:08:52&#43;02:00">Wed Mar 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-03-01">2017-03-01</h2>
<ul>
<li>Run the 279 CIAT author corrections on CGSpace</li>
</ul>
<h2 id="2017-03-02">2017-03-02</h2>
<ul>
<li>Skype with Michael and Peter, discussing moving the CGIAR Library to CGSpace</li>
<li>CGIAR people possibly open to moving content, redirecting library.cgiar.org to CGSpace and letting CGSpace resolve their handles</li>
<li>They might come in at the top level in one &ldquo;CGIAR System&rdquo; community, or with several communities</li>
<li>I need to spend a bit of time looking at the multiple handle support in DSpace and see if new content can be minted in both handles, or just one?</li>
<li>Need to send Peter and Michael some notes about this in a few days</li>
<li>Also, need to consider talking to Atmire about hiring them to bring ORCiD metadata to REST / OAI</li>
<li>Filed an issue on DSpace issue tracker for the <code>filter-media</code> bug that causes it to process JPGs even when limiting to the PDF thumbnail plugin: <a href="https://jira.duraspace.org/browse/DS-3516">DS-3516</a></li>
<li>Discovered that the ImageMagic <code>filter-media</code> plugin creates JPG thumbnails with the CMYK colorspace when the source PDF is using CMYK</li>
<li><p>Interestingly, it seems DSpace 4.x&rsquo;s thumbnails were sRGB, but forcing regeneration using DSpace 5.x&rsquo;s ImageMagick plugin creates CMYK JPGs if the source PDF was CMYK (see <a href="https://cgspace.cgiar.org/handle/10568/51999"><sup>10568</sup>&frasl;<sub>51999</sub></a>):</p>
<pre><code>$ identify ~/Desktop/alc_contrastes_desafios.jpg
/Users/aorth/Desktop/alc_contrastes_desafios.jpg JPEG 464x600 464x600+0+0 8-bit CMYK 168KB 0.000u 0:00.000
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-03/'>Read more →</a>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-02/">February, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-02-07T07:04:52-08:00">Tue Feb 07, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-02-07">2017-02-07</h2>
<ul>
<li><p>An item was mapped twice erroneously again, so I had to remove one of the mappings manually:</p>
<pre><code>dspace=# select * from collection2item where item_id = '80278';
id | collection_id | item_id
-------+---------------+---------
92551 | 313 | 80278
92550 | 313 | 80278
90774 | 1051 | 80278
(3 rows)
dspace=# delete from collection2item where id = 92551 and item_id = 80278;
DELETE 1
</code></pre></li>
<li><p>Create issue on GitHub to track the addition of CCAFS Phase II project tags (<a href="https://github.com/ilri/DSpace/issues/301">#301</a>)</p></li>
<li><p>Looks like we&rsquo;ll be using <code>cg.identifier.ccafsprojectpii</code> as the field name</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-02/'>Read more →</a>
</article>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-01/">January, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-01-02T10:43:00&#43;03:00">Mon Jan 02, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2017-01-02">2017-01-02</h2>
<ul>
<li>I checked to see if the Solr sharding task that is supposed to run on January 1st had run and saw there was an error</li>
<li>I tested on DSpace Test as well and it doesn&rsquo;t work there either</li>
<li>I asked on the dspace-tech mailing list because it seems to be broken, and actually now I&rsquo;m not sure if we&rsquo;ve ever had the sharding task run successfully over all these years</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2017-01/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-12/">December, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-12-02T10:43:00&#43;03:00">Fri Dec 02, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-12-02">2016-12-02</h2>
<ul>
<li>CGSpace was down for five hours in the morning while I was sleeping</li>
<li><p>While looking in the logs for errors, I see tons of warnings about Atmire MQM:</p>
<pre><code>2016-12-02 03:00:32,352 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=CREATE, SubjectType=BUNDLE, SubjectID=70316, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632305, dispatcher=1544803905, detail=[null], transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=MODIFY_METADATA, SubjectType=BUNDLE, SubjectID =70316, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632309, dispatcher=1544803905, detail=&quot;dc.title&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=ADD, SubjectType=ITEM, SubjectID=80044, Object Type=BUNDLE, ObjectID=70316, TimeStamp=1480647632311, dispatcher=1544803905, detail=&quot;THUMBNAIL&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=ADD, SubjectType=BUNDLE, SubjectID=70316, Obje ctType=BITSTREAM, ObjectID=86715, TimeStamp=1480647632318, dispatcher=1544803905, detail=&quot;-1&quot;, transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
2016-12-02 03:00:32,353 WARN com.atmire.metadataquality.batchedit.BatchEditConsumer @ BatchEditConsumer should not have been given this kind of Subject in an event, skipping: org.dspace.event.Event(eventType=MODIFY, SubjectType=ITEM, SubjectID=80044, ObjectType=(Unknown), ObjectID=-1, TimeStamp=1480647632351, dispatcher=1544803905, detail=[null], transactionID=&quot;TX157907838689377964651674089851855413607&quot;)
</code></pre></li>
<li><p>I see thousands of them in the logs for the last few months, so it&rsquo;s not related to the DSpace 5.5 upgrade</p></li>
<li><p>I&rsquo;ve raised a ticket with Atmire to ask</p></li>
<li><p>Another worrying error from dspace.log is:</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-12/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-11/">November, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-11-01T09:21:00&#43;03:00">Tue Nov 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-11-01">2016-11-01</h2>
<ul>
<li>Add <code>dc.type</code> to the output options for Atmire&rsquo;s Listings and Reports module (<a href="https://github.com/ilri/DSpace/pull/286">#286</a>)</li>
</ul>
<p><img src="/cgspace-notes/2016/11/listings-and-reports.png" alt="Listings and Reports with output type" /></p>
<a href='https://alanorth.github.io/cgspace-notes/2016-11/'>Read more →</a>
</article>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-10/">October, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-10-03T15:53:00&#43;03:00">Mon Oct 03, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-10-03">2016-10-03</h2>
<ul>
<li>Testing adding <a href="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li><p>I exported a random item&rsquo;s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</p>
<pre><code>0000-0002-6115-0956||0000-0002-3812-8793||0000-0001-7462-405X
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-10/'>Read more →</a>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-09/">September, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-09-01T15:53:00&#43;03:00">Thu Sep 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-09-01">2016-09-01</h2>
<ul>
<li>Discuss helping CCAFS with some batch tagging of ORCID IDs for their authors</li>
<li>Discuss how the migration of CGIAR&rsquo;s Active Directory to a flat structure will break our LDAP groups in DSpace</li>
<li>We had been using <code>DC=ILRI</code> to determine whether a user was ILRI or not</li>
<li><p>It looks like we might be able to use OUs now, instead of DCs:</p>
<pre><code>$ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=org&quot; -D &quot;admigration1@cgiarad.org&quot; -W &quot;(sAMAccountName=admigration1)&quot;
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-09/'>Read more →</a>
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<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-07-01T10:53:00&#43;03:00">Fri Jul 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-07-01">2016-07-01</h2>
<ul>
<li>Add <code>dc.description.sponsorship</code> to Discovery sidebar facets and make investors clickable in item view (<a href="https://github.com/ilri/DSpace/issues/232">#232</a>)</li>
<li><p>I think this query should find and replace all authors that have &ldquo;,&rdquo; at the end of their names:</p>
<pre><code>dspacetest=# update metadatavalue set text_value = regexp_replace(text_value, '(^.+?),$', '\1') where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
UPDATE 95
dspacetest=# select text_value from metadatavalue where metadata_field_id=3 and resource_type_id=2 and text_value ~ '^.+?,$';
text_value
------------
(0 rows)
</code></pre></li>
<li><p>In this case the select query was showing 95 results before the update</p></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-07/'>Read more →</a>
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<h1 class="blog-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description" dir="auto">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
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<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-06/">June, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-06-01T10:53:00&#43;03:00">Wed Jun 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-06-01">2016-06-01</h2>
<ul>
<li>Experimenting with IFPRI OAI (we want to harvest their publications)</li>
<li>After reading the <a href="https://www.oclc.org/support/services/contentdm/help/server-admin-help/oai-support.en.html">ContentDM documentation</a> I found IFPRI&rsquo;s OAI endpoint: <a href="http://ebrary.ifpri.org/oai/oai.php">http://ebrary.ifpri.org/oai/oai.php</a></li>
<li>After reading the <a href="https://www.openarchives.org/OAI/openarchivesprotocol.html">OAI documentation</a> and testing with an <a href="http://validator.oaipmh.com/">OAI validator</a> I found out how to get their publications</li>
<li>This is their publications set: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc">http://ebrary.ifpri.org/oai/oai.php?verb=ListRecords&amp;from=2016-01-01&amp;set=p15738coll2&amp;metadataPrefix=oai_dc</a></li>
<li>You can see the others by using the OAI <code>ListSets</code> verb: <a href="http://ebrary.ifpri.org/oai/oai.php?verb=ListSets">http://ebrary.ifpri.org/oai/oai.php?verb=ListSets</a></li>
<li>Working on second phase of metadata migration, looks like this will work for moving CPWF-specific data in <code>dc.identifier.fund</code> to <code>cg.identifier.cpwfproject</code> and then the rest to <code>dc.description.sponsorship</code></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-06/'>Read more →</a>
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<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-05/">May, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-05-01T23:06:00&#43;03:00">Sun May 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-05-01">2016-05-01</h2>
<ul>
<li>Since yesterday there have been 10,000 REST errors and the site has been unstable again</li>
<li>I have blocked access to the API now</li>
<li><p>There are 3,000 IPs accessing the REST API in a 24-hour period!</p>
<pre><code># awk '{print $1}' /var/log/nginx/rest.log | uniq | wc -l
3168
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-05/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-04/">April, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-04-04T11:06:00&#43;03:00">Mon Apr 04, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-04-04">2016-04-04</h2>
<ul>
<li>Looking at log file use on CGSpace and notice that we need to work on our cron setup a bit</li>
<li>We are backing up all logs in the log folder, including useless stuff like solr, cocoon, handle-plugin, etc</li>
<li>After running DSpace for over five years I&rsquo;ve never needed to look in any other log file than dspace.log, leave alone one from last year!</li>
<li>This will save us a few gigs of backup space we&rsquo;re paying for on S3</li>
<li>Also, I noticed the <code>checker</code> log has some errors we should pay attention to:</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-04/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-03/">March, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-03-02T16:50:00&#43;03:00">Wed Mar 02, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-03-02">2016-03-02</h2>
<ul>
<li>Looking at issues with author authorities on CGSpace</li>
<li>For some reason we still have the <code>index-lucene-update</code> cron job active on CGSpace, but I&rsquo;m pretty sure we don&rsquo;t need it as of the latest few versions of Atmire&rsquo;s Listings and Reports module</li>
<li>Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Java JDK 1.7 to match environment on CGSpace server</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-03/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-02/">February, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-02-05T13:18:00&#43;03:00">Fri Feb 05, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-02-05">2016-02-05</h2>
<ul>
<li>Looking at some DAGRIS data for Abenet Yabowork</li>
<li>Lots of issues with spaces, newlines, etc causing the import to fail</li>
<li>I noticed we have a very <em>interesting</em> list of countries on CGSpace:</li>
</ul>
<p><img src="/cgspace-notes/2016/02/cgspace-countries.png" alt="CGSpace country list" /></p>
<ul>
<li>Not only are there 49,000 countries, we have some blanks (25)&hellip;</li>
<li>Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&rdquo;</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-02/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-01/">January, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-01-13T13:18:00&#43;03:00">Wed Jan 13, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-01-13">2016-01-13</h2>
<ul>
<li>Move ILRI collection <code>10568/12503</code> from <code>10568/27869</code> to <code>10568/27629</code> using the <a href="https://gist.github.com/alanorth/392c4660e8b022d99dfa">move_collections.sh</a> script I wrote last year.</li>
<li>I realized it is only necessary to clear the Cocoon cache after moving collections—rather than reindexing—as no metadata has changed, and therefore no search or browse indexes need to be updated.</li>
<li>Update GitHub wiki for documentation of <a href="https://github.com/ilri/DSpace/wiki/Maintenance-Tasks">maintenance tasks</a>.</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-01/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-12/">December, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-12-02T13:18:00&#43;03:00">Wed Dec 02, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-12-02">2015-12-02</h2>
<ul>
<li><p>Replace <code>lzop</code> with <code>xz</code> in log compression cron jobs on DSpace Test—it uses less space:</p>
<pre><code># cd /home/dspacetest.cgiar.org/log
# ls -lh dspace.log.2015-11-18*
-rw-rw-r-- 1 tomcat7 tomcat7 2.0M Nov 18 23:59 dspace.log.2015-11-18
-rw-rw-r-- 1 tomcat7 tomcat7 387K Nov 18 23:59 dspace.log.2015-11-18.lzo
-rw-rw-r-- 1 tomcat7 tomcat7 169K Nov 18 23:59 dspace.log.2015-11-18.xz
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2015-12/'>Read more →</a>
</article>
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2015-11/">November, 2015</a></h2>
<p class="blog-post-meta"><time datetime="2015-11-23T17:00:57&#43;03:00">Mon Nov 23, 2015</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2015-11-22">2015-11-22</h2>
<ul>
<li>CGSpace went down</li>
<li>Looks like DSpace exhausted its PostgreSQL connection pool</li>
<li><p>Last week I had increased the limit from 30 to 60, which seemed to help, but now there are many more idle connections:</p>
<pre><code>$ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspace
78
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2015-11/'>Read more →</a>
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<h4>Recent Posts</h4>
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<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
<li><a href="/cgspace-notes/2019-08/">August, 2019</a></li>
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
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<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
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@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
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@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
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@ -91,12 +91,49 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2019-01/">January, 2019</a></h2>
<p class="blog-post-meta"><time datetime="2019-01-02T09:48:30&#43;02:00">Wed Jan 02, 2019</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2019-01-02">2019-01-02</h2>
<ul>
<li>Linode alerted that CGSpace (linode18) had a higher outbound traffic rate than normal early this morning</li>
<li><p>I don&rsquo;t see anything interesting in the web server logs around that time though:</p>
<pre><code># zcat --force /var/log/nginx/*.log /var/log/nginx/*.log.1 | grep -E &quot;02/Jan/2019:0(1|2|3)&quot; | awk '{print $1}' | sort | uniq -c | sort -n | tail -n 10
92 40.77.167.4
99 210.7.29.100
120 38.126.157.45
177 35.237.175.180
177 40.77.167.32
216 66.249.75.219
225 18.203.76.93
261 46.101.86.248
357 207.46.13.1
903 54.70.40.11
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2019-01/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-12/">December, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-12-02T02:09:30&#43;02:00">Sun Dec 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -125,8 +162,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-11/">November, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-11-01T16:41:30&#43;02:00">Thu Nov 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -155,8 +192,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-10/">October, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-10-01T22:31:54&#43;03:00">Mon Oct 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -178,8 +215,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -203,8 +240,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-08/">August, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-08-01T11:52:54&#43;03:00">Wed Aug 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -242,8 +279,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-07/">July, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-07-01T12:56:54&#43;03:00">Sun Jul 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -272,8 +309,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-06/">June, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-06-04T19:49:54-07:00">Mon Jun 04, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -315,8 +352,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-05/">May, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-05-01T16:43:54&#43;03:00">Tue May 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -344,8 +381,8 @@ sys 2m7.289s
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-04/">April, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-04-01T16:13:54&#43;02:00">Sun Apr 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -362,28 +399,6 @@ sys 2m7.289s
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
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@ -408,6 +423,8 @@ sys 2m7.289s
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -416,8 +433,6 @@ sys 2m7.289s
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

62
docs/tags/page/3/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,12 +91,34 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-03/">March, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-03-02T16:07:54&#43;02:00">Fri Mar 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
</p>
</header>
<h2 id="2018-03-02">2018-03-02</h2>
<ul>
<li>Export a CSV of the IITA community metadata for Martin Mueller</li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2018-03/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-02/">February, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-02-01T16:28:54&#43;02:00">Thu Feb 01, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -120,8 +142,8 @@
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2018-01/">January, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2018-01-02T08:35:54-08:00">Tue Jan 02, 2018</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -212,8 +234,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-12/">December, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-12-01T13:53:54&#43;03:00">Fri Dec 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -237,8 +259,8 @@ dspace.log.2018-01-02:34
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-11/">November, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-11-02T09:37:54&#43;02:00">Thu Nov 02, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -275,8 +297,8 @@ COPY 54701
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-10/">October, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in <p class="blog-post-meta"><time datetime="2017-10-01T08:07:54&#43;03:00">Sun Oct 01, 2017</time> by Alan Orth in
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p> </p>
</header> </header>
@ -307,6 +329,8 @@ COPY 54701
<i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a> <i class="fa fa-folder" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/categories/notes" rel="category tag">Notes</a>
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/migration" rel="tag">Migration</a>
</p> </p>
</header> </header>
<p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p> <p>Rough notes for importing the CGIAR Library content. It was decided that this content would go to a new top-level community called <em>CGIAR System Organization</em>.</p>
@ -415,24 +439,6 @@ COPY 54701
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/2/" rel="prev" role="button">Previous page</a>
@ -457,6 +463,8 @@ COPY 54701
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -465,8 +473,6 @@ COPY 54701
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

61
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View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,24 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-06/">June, 2017</a></h2>
<p class="blog-post-meta"><time datetime="2017-06-01T10:14:52&#43;03:00">Thu Jun 01, 2017</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg.
<a href='https://alanorth.github.io/cgspace-notes/2017-06/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2017-05/">May, 2017</a></h2>
@ -367,39 +385,6 @@ DELETE 1
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<nav class="blog-pagination"> <nav class="blog-pagination">
<a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/3/" rel="prev" role="button">Previous page</a> <a class="btn btn-outline-primary" href="/cgspace-notes/tags/page/3/" rel="prev" role="button">Previous page</a>
@ -424,6 +409,8 @@ $ git rebase -i dspace-5.5
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -432,8 +419,6 @@ $ git rebase -i dspace-5.5
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>

43
docs/tags/page/5/index.html
View File

@ -10,7 +10,7 @@
<meta property="og:type" content="website" /> <meta property="og:type" content="website" />
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" /> <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/tags/" />
<meta property="og:updated_time" content="2019-10-01T13:20:51+03:00" /> <meta property="og:updated_time" content="2019-10-28T13:27:35+02:00" />
<meta name="twitter:card" content="summary"/> <meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="Tags"/> <meta name="twitter:title" content="Tags"/>
@ -29,8 +29,8 @@
"@type": "Person", "@type": "Person",
"name": "Alan Orth" "name": "Alan Orth"
}, },
"dateModified": "2019-10-01T13:20:51+03:00", "dateModified": "2019-10-28T13:27:35+02:00",
"keywords": "notes,notes,", "keywords": "notes,migration,notes,",
"description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository." "description": "Documenting day-to-day work on the [CGSpace](https:\/\/cgspace.cgiar.org) repository."
} }
</script> </script>
@ -91,6 +91,39 @@
<article class="blog-post">
<header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-08/">August, 2016</a></h2>
<p class="blog-post-meta"><time datetime="2016-08-01T15:53:00&#43;03:00">Mon Aug 01, 2016</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2016-08-01">2016-08-01</h2>
<ul>
<li>Add updated distribution license from Sisay (<a href="https://github.com/ilri/DSpace/issues/259">#259</a>)</li>
<li>Play with upgrading Mirage 2 dependencies in <code>bower.json</code> because most are several versions of out date</li>
<li>Bootstrap is at 3.3.0 but upstream is at 3.3.7, and upgrading to anything beyond 3.3.1 breaks glyphicons and probably more</li>
<li>bower stuff is a dead end, waste of time, too many issues</li>
<li>Anything after Bootstrap 3.3.1 makes glyphicons disappear (HTTP 404 trying to access from incorrect path of <code>fonts</code>)</li>
<li><p>Start working on DSpace 5.1 → 5.5 port:</p>
<pre><code>$ git checkout -b 55new 5_x-prod
$ git reset --hard ilri/5_x-prod
$ git rebase -i dspace-5.5
</code></pre></li>
</ul>
<a href='https://alanorth.github.io/cgspace-notes/2016-08/'>Read more →</a>
</article>
<article class="blog-post"> <article class="blog-post">
<header> <header>
<h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2> <h2 class="blog-post-title" dir="auto"><a href="https://alanorth.github.io/cgspace-notes/2016-07/">July, 2016</a></h2>
@ -367,6 +400,8 @@ text_value
<ol class="list-unstyled"> <ol class="list-unstyled">
<li><a href="/cgspace-notes/cgspace-cgcorev2-migration/">CGSpace CG Core v2 Migration</a></li>
<li><a href="/cgspace-notes/2019-10/">October, 2019</a></li> <li><a href="/cgspace-notes/2019-10/">October, 2019</a></li>
<li><a href="/cgspace-notes/2019-09/">September, 2019</a></li> <li><a href="/cgspace-notes/2019-09/">September, 2019</a></li>
@ -375,8 +410,6 @@ text_value
<li><a href="/cgspace-notes/2019-07/">July, 2019</a></li> <li><a href="/cgspace-notes/2019-07/">July, 2019</a></li>
<li><a href="/cgspace-notes/2019-06/">June, 2019</a></li>
</ol> </ol>
</section> </section>