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Add notes for 2018-02-07

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Alan Orth 2018-02-07 12:34:36 +02:00
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content/post/2018-02.md
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@ -130,3 +130,12 @@ Tue Feb 6 09:30:32 UTC 2018
- Also, this will mean that when a search bot comes along and hammers the XMLUI, the REST and OAI applications will be fine
- I'm not actually sure if the Solr web application uses the database though, so I'll have to check later and remove it if necessary
- I deployed the changes on DSpace Test only for now, so I will monitor and make them on CGSpace later this week
## 2018-02-07
- Abenet wrote to ask a question about the ORCiD lookup not working for one CIAT user on CGSpace
- I tried on DSpace Test and indeed the lookup just doesn't work!
- The ORCiD code in DSpace appears to be using `http://pub.orcid.org/`, but when I go there in the browser it redirects me to `https://pub.orcid.org/v2.0/`
- According to [the announcement](https://groups.google.com/forum/#!topic/orcid-api-users/qfg-HwAB1bk) the v1 API was moved from `http://pub.orcid.org/` to `https://pub.orcid.org/v1.2` until March 1st when it will be discontinued for good
- But the old URL is hard coded in DSpace and it doesn't work anyways, because it currently redirects you to `https://pub.orcid.org/v2.0/v1.2`
- So I guess we have to disable that shit once and for all and switch to a controlled vocabulary

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@ -53,7 +53,7 @@ $ psql -c 'SELECT * from pg_stat_activity;' | grep idle | grep -c cgspac
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@ -55,7 +55,7 @@ Replace lzop with xz in log compression cron jobs on DSpace Test—it uses less
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@ -45,7 +45,7 @@ Update GitHub wiki for documentation of maintenance tasks.
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@ -59,7 +59,7 @@ Also, lots of things like &ldquo;COTE D`LVOIRE&rdquo; and &ldquo;COTE D IVOIRE&r
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@ -45,7 +45,7 @@ Reinstall my local (Mac OS X) DSpace stack with Tomcat 7, PostgreSQL 9.3, and Ja
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@ -49,7 +49,7 @@ Also, I noticed the checker log has some errors we should pay attention to:
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@ -53,7 +53,7 @@ There are 3,000 IPs accessing the REST API in a 24-hour period!
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@ -51,7 +51,7 @@ Working on second phase of metadata migration, looks like this will work for mov
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@ -67,7 +67,7 @@ In this case the select query was showing 95 results before the update
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@ -61,7 +61,7 @@ $ git rebase -i dspace-5.5
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public/2016-09/index.html
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@ -53,7 +53,7 @@ $ ldapsearch -x -H ldaps://svcgroot2.cgiarad.org:3269/ -b &quot;dc=cgiarad,dc=or
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@ -61,7 +61,7 @@ I exported a random item&rsquo;s metadata as CSV, deleted all columns except id
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@ -45,7 +45,7 @@ Add dc.type to the output options for Atmire&rsquo;s Listings and Reports module
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@ -69,7 +69,7 @@ Another worrying error from dspace.log is:
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@ -45,7 +45,7 @@ I asked on the dspace-tech mailing list because it seems to be broken, and actua
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@ -73,7 +73,7 @@ Looks like we&rsquo;ll be using cg.identifier.ccafsprojectpii as the field name
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@ -77,7 +77,7 @@ $ identify ~/Desktop/alc_contrastes_desafios.jpg
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public/2017-04/index.html
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@ -63,7 +63,7 @@ $ [dspace]/bin/dspace filter-media -f -i 10568/16498 -p &quot;ImageMagick PDF Th
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@ -29,7 +29,7 @@
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="May, 2017"/>
<meta name="twitter:description" content="2017-05-01 ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items: https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683 2017-05-02 Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request 2017-05-04 Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
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@ -29,7 +29,7 @@
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="June, 2017"/>
<meta name="twitter:description" content="2017-06-01 After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
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@ -57,7 +57,7 @@ We can use PostgreSQL&rsquo;s extended output format (-x) plus sed to format the
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@ -77,7 +77,7 @@ Then I cleaned up the author authorities and HTML characters in OpenRefine and s
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@ -53,7 +53,7 @@ Ask Sisay to clean up the WLE approvers a bit, as Marianne&rsquo;s user account
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@ -57,7 +57,7 @@ Add Katherine Lutz to the groups for content submission and edit steps of the CG
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@ -77,7 +77,7 @@ COPY 54701
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public/2017-12/index.html
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@ -47,7 +47,7 @@ The list of connections to XMLUI and REST API for today:
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public/2018-01/index.html
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@ -185,7 +185,7 @@ Danny wrote to ask for help renewing the wildcard ilri.org certificate and I adv
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public/2018-02/index.html
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@ -23,7 +23,7 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
<meta property="article:published_time" content="2018-02-01T16:28:54&#43;02:00"/>
<meta property="article:modified_time" content="2018-02-06T14:03:07&#43;02:00"/>
<meta property="article:modified_time" content="2018-02-06T14:03:46&#43;02:00"/>
@ -47,7 +47,7 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
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@ -57,9 +57,9 @@ I copied the logic in the jmx_tomcat_dbpools provided by Ubuntu&rsquo;s munin-pl
"@type": "BlogPosting",
"headline": "February, 2018",
"url": "https://alanorth.github.io/cgspace-notes/2018-02/",
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"author": {
"@type": "Person",
"name": "Alan Orth"
@ -265,6 +265,17 @@ Tue Feb 6 09:30:32 UTC 2018
<li>I deployed the changes on DSpace Test only for now, so I will monitor and make them on CGSpace later this week</li>
</ul>
<h2 id="2018-02-07">2018-02-07</h2>
<ul>
<li>Abenet wrote to ask a question about the ORCiD lookup not working for one CIAT user on CGSpace</li>
<li>I tried on DSpace Test and indeed the lookup just doesn&rsquo;t work!</li>
<li>The ORCiD code in DSpace appears to be using <code>http://pub.orcid.org/</code>, but when I go there in the browser it redirects me to <code>https://pub.orcid.org/v2.0/</code></li>
<li>According to <a href="https://groups.google.com/forum/#!topic/orcid-api-users/qfg-HwAB1bk">the announcement</a> the v1 API was moved from <code>http://pub.orcid.org/</code> to <code>https://pub.orcid.org/v1.2</code> until March 1st when it will be discontinued for good</li>
<li>But the old URL is hard coded in DSpace and it doesn&rsquo;t work anyways, because it currently redirects you to <code>https://pub.orcid.org/v2.0/v1.2</code></li>
<li>So I guess we have to disable that shit once and for all and switch to a controlled vocabulary</li>
</ul>

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@ -26,7 +26,7 @@
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="404 Page not found"/>
<meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
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@ -26,7 +26,7 @@
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<meta name="twitter:title" content="Categories"/>
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@ -26,7 +26,7 @@
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@ -29,7 +29,7 @@
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<meta name="twitter:title" content="CGIAR Library Migration"/>
<meta name="twitter:description" content="Notes on the migration of the CGIAR Library to CGSpace"/>
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@ -26,7 +26,7 @@
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@ -26,7 +26,7 @@
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@ -26,7 +26,7 @@
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@ -26,7 +26,7 @@
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@ -4,7 +4,7 @@
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@ -149,7 +149,7 @@
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@ -160,7 +160,7 @@
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@ -172,13 +172,13 @@
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