Add notes for 2020-04-12

content/posts/2020-04.md

@@ -89,6 +89,34 @@ $ ./add-orcid-identifiers-csv.py -i 2020-04-07-fix-duplicate-orcids.csv -db dspa
 - I ran the fixes on DSpace Test and CGSpace as well
 - I started testing the [pull request](https://github.com/ilri/DSpace/pull/445) sent by Atmire yesterday
   - I notice that we now need `yarn` to build, and I need to bump the Node.js `engine` version in our Mirage 2 theme in order to get it to build on Node.js 10.x
+  - Font Awesome icons for GitHub etc weren't loading, and after a bit of troubleshooting I replaced version 4.5.0 with 5.13.0 and to my surprise they now include Mendeley and ORCID so we can get rid of the Academicons dependency
 
+## 2020-04-12
+
+- Testing the Atmire DSpace 6.3 code with a clean CGSpace DSpace 5.8 database snapshot
+  - One Flyway migration failed so I had to manually remove it (and of course create the pgcrypto extension):
+
+```
+dspace63=# DELETE FROM schema_version WHERE version IN ('5.8.2015.12.03.3');
+dspace63=# CREATE EXTENSION pgcrypto;
+```
+
+- Then DSpace 6.3 started up OK and I was able to see some statistics in the Content and Usage Analysis (CUA) module, but not on community, collection, or item pages
+  - I also noticed at least one of these errors in the DSpace log:
+
+```
+2020-04-12 16:34:33,363 ERROR com.atmire.dspace.app.xmlui.aspect.statistics.editorparts.DataTableTransformer @ java.lang.IllegalArgumentException: Invalid UUID string: 1
+```
+
+- And I remembered I actually need to run the DSpace 6.4 Solr UUID migrations:
+
+```
+$ export JAVA_OPTS="-Xmx1024m -Dfile.encoding=UTF-8"
+$ ~/dspace63/bin/dspace solr-upgrade-statistics-6x
+```
+
+- Run system updates on DSpace Test (linode26) and reboot it
+- More work on the DSpace 6.3 stuff, improving the GDPR consent logic to use [haven](https://github.com/chiiya/haven) instead of cookieconsent
+  - It works better by injecting the Google Analytics script after the user clicks agree, and it also has a preferences section that gets automatically injected on the privacy page!
 
 <!-- vim: set sw=2 ts=2: -->

docs/2020-04/index.html

@@ -25,7 +25,7 @@ On the same note, the one item Abenet pointed out last week now has a donut with
 <meta property="og:type" content="article" />
 <meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2020-04/" />
 <meta property="article:published_time" content="2020-04-02T10:53:24+03:00" />
-<meta property="article:modified_time" content="2020-04-07T10:37:48+03:00" />
+<meta property="article:modified_time" content="2020-04-07T16:32:02+03:00" />
 
 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="April, 2020"/>
@@ -55,9 +55,9 @@ On the same note, the one item Abenet pointed out last week now has a donut with
   "@type": "BlogPosting",
   "headline": "April, 2020",
   "url": "https://alanorth.github.io/cgspace-notes/2020-04/",
-  "wordCount": "578",
+  "wordCount": "793",
   "datePublished": "2020-04-02T10:53:24+03:00",
-  "dateModified": "2020-04-07T10:37:48+03:00",
+  "dateModified": "2020-04-07T16:32:02+03:00",
   "author": {
     "@type": "Person",
     "name": "Alan Orth"
@@ -215,6 +215,38 @@ DELETE 994
 <li>I started testing the <a href="https://github.com/ilri/DSpace/pull/445">pull request</a> sent by Atmire yesterday
 <ul>
 <li>I notice that we now need <code>yarn</code> to build, and I need to bump the Node.js <code>engine</code> version in our Mirage 2 theme in order to get it to build on Node.js 10.x</li>
+<li>Font Awesome icons for GitHub etc weren&rsquo;t loading, and after a bit of troubleshooting I replaced version 4.5.0 with 5.13.0 and to my surprise they now include Mendeley and ORCID so we can get rid of the Academicons dependency</li>
+</ul>
+</li>
+</ul>
+<h2 id="2020-04-12">2020-04-12</h2>
+<ul>
+<li>Testing the Atmire DSpace 6.3 code with a clean CGSpace DSpace 5.8 database snapshot
+<ul>
+<li>One Flyway migration failed so I had to manually remove it (and of course create the pgcrypto extension):</li>
+</ul>
+</li>
+</ul>
+<pre><code>dspace63=# DELETE FROM schema_version WHERE version IN ('5.8.2015.12.03.3');
+dspace63=# CREATE EXTENSION pgcrypto;
+</code></pre><ul>
+<li>Then DSpace 6.3 started up OK and I was able to see some statistics in the Content and Usage Analysis (CUA) module, but not on community, collection, or item pages
+<ul>
+<li>I also noticed at least one of these errors in the DSpace log:</li>
+</ul>
+</li>
+</ul>
+<pre><code>2020-04-12 16:34:33,363 ERROR com.atmire.dspace.app.xmlui.aspect.statistics.editorparts.DataTableTransformer @ java.lang.IllegalArgumentException: Invalid UUID string: 1
+</code></pre><ul>
+<li>And I remembered I actually need to run the DSpace 6.4 Solr UUID migrations:</li>
+</ul>
+<pre><code>$ export JAVA_OPTS=&quot;-Xmx1024m -Dfile.encoding=UTF-8&quot;
+$ ~/dspace63/bin/dspace solr-upgrade-statistics-6x
+</code></pre><ul>
+<li>Run system updates on DSpace Test (linode26) and reboot it</li>
+<li>More work on the DSpace 6.3 stuff, improving the GDPR consent logic to use <a href="https://github.com/chiiya/haven">haven</a> instead of cookieconsent
+<ul>
+<li>It works better by injecting the Google Analytics script after the user clicks agree, and it also has a preferences section that gets automatically injected on the privacy page!</li>
 </ul>
 </li>
 </ul>

docs/sitemap.xml

@@ -4,27 +4,27 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/2020-04/</loc>
-    <lastmod>2020-04-07T10:37:48+03:00</lastmod>
+    <lastmod>2020-04-07T16:32:02+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/categories/</loc>
-    <lastmod>2020-04-07T10:37:48+03:00</lastmod>
+    <lastmod>2020-04-07T16:32:02+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2020-04-07T10:37:48+03:00</lastmod>
+    <lastmod>2020-04-07T16:32:02+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/categories/notes/</loc>
-    <lastmod>2020-04-07T10:37:48+03:00</lastmod>
+    <lastmod>2020-04-07T16:32:02+03:00</lastmod>
   </url>
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/posts/</loc>
-    <lastmod>2020-04-07T10:37:48+03:00</lastmod>
+    <lastmod>2020-04-07T16:32:02+03:00</lastmod>
   </url>
   
   <url>