Add notes for 2018-04-18

content/posts/2018-04.md

@@ -332,3 +332,37 @@ Total time: 4 minutes 12 seconds
 ## 2018-04-16
 
 - Communicate with Bioversity about their project to migrate their e-Library (Typo3) and Sci-lit databases to CGSpace
+
+## 2018-04-18
+
+- IWMI people are asking about building a search query that outputs RSS for their reports
+- They want the same results as this Discovery query: https://cgspace.cgiar.org/discover?filtertype_1=dateAccessioned&filter_relational_operator_1=contains&filter_1=2018&submit_apply_filter=&query=&scope=10568%2F16814&rpp=100&sort_by=dc.date.issued_dt&order=desc
+- They will need to use OpenSearch, but I can't remember all the parameters
+- Apparently search sort options for OpenSearch are in `dspace.cfg`:
+
+```
+webui.itemlist.sort-option.1 = title:dc.title:title
+webui.itemlist.sort-option.2 = dateissued:dc.date.issued:date
+webui.itemlist.sort-option.3 = dateaccessioned:dc.date.accessioned:date
+webui.itemlist.sort-option.4 = type:dc.type:text
+```
+
+- They want items by issue date, so we need to use sort option 2
+- According to the DSpace Manual there are only the following parameters to OpenSearch: format, scope, rpp, start, and sort_by
+- The OpenSearch `query` parameter expects a Discovery search filter that is defined in `dspace/config/spring/api/discovery.xml`
+- So for IWMI they should be able to use something like this: https://cgspace.cgiar.org/open-search/discover?query=dateIssued:2018&scope=10568/16814&sort_by=2&order=DESC&format=rss
+- There are also `rpp` (results per page) and `start` parameters but in my testing now on DSpace 5.5 they behave very strangely
+- For example, set `rpp=1` and then check the results for `start` values of 0, 1, and 2 and they are all the same!
+- If I have time I will check if this behavior persists on DSpace 6.x on the official DSpace demo and file a bug
+- Also, the DSpace Manual as of 5.x has very poor documentation for OpenSearch
+- They don't tell you to use Discovery search filters in the `query` (with format `query=dateIssued:2018`)
+- They don't tell you that the sort options are actually defined in `dspace.cfg` (ie, you need to use `2` instead of `dc.date.issued_dt`)
+- They are missing the `order` parameter (ASC vs DESC)
+- I notice that DSpace Test has crashed again, due to memory:
+
+```
+# grep -c 'java.lang.OutOfMemoryError: Java heap space' /var/log/tomcat7/catalina.out
+178
+```
+
+- I will increase the JVM heap size from 5120M to 6144M, though we don't have much room left to grow as DSpace Test (linode19) is using a smaller instance size than CGSpace

docs/2015-11/index.html

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docs/2015-12/index.html

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docs/2016-01/index.html

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docs/2016-02/index.html

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docs/2016-03/index.html

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docs/2016-04/index.html

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docs/2016-05/index.html

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docs/2016-06/index.html

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docs/2016-07/index.html

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docs/2016-08/index.html

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docs/2016-09/index.html

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docs/2016-10/index.html

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docs/2016-11/index.html

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docs/2016-12/index.html

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docs/2017-01/index.html

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docs/2017-02/index.html

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docs/2017-03/index.html

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docs/2017-04/index.html

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docs/2017-05/index.html

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 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="May, 2017"/>
 <meta name="twitter:description" content="2017-05-01  ICARDA apparently started working on CG Core on their MEL repository They have done a few cg.* fields, but not very consistent and even copy some of CGSpace items:  https://mel.cgiar.org/xmlui/handle/20.500.11766/6911?show=full https://cgspace.cgiar.org/handle/10568/73683   2017-05-02  Atmire got back about the Workflow Statistics issue, and apparently it&rsquo;s a bug in the CUA module so they will send us a pull request  2017-05-04  Sync DSpace Test with database and assetstore from CGSpace Re-deploy DSpace Test with Atmire&rsquo;s CUA patch for workflow statistics, run system updates, and restart the server Now I can see the workflow statistics and am able to select users, but everything returns 0 items Megan says there are still some mapped items are not appearing since last week, so I forced a full index-discovery -b Need to remember to check if the collection has more items (currently 39 on CGSpace, but 118 on the freshly reindexed DSPace Test) tomorrow: https://cgspace."/>
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docs/2017-06/index.html

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 <meta name="twitter:card" content="summary"/>
 <meta name="twitter:title" content="June, 2017"/>
 <meta name="twitter:description" content="2017-06-01  After discussion with WLE and CGSpace content people, we decided to just add one metadata field for the WLE Research Themes The cg.identifier.wletheme field will be used for both Phase I and Phase II Research Themes Then we&rsquo;ll create a new sub-community for Phase II and create collections for the research themes there The current &ldquo;Research Themes&rdquo; community will be renamed to &ldquo;WLE Phase I Research Themes&rdquo; Tagged all items in the current Phase I collections with their appropriate themes Create pull request to add Phase II research themes to the submission form: #328 Add cg."/>
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docs/2017-07/index.html

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docs/2017-08/index.html

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docs/2017-09/index.html

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docs/2017-10/index.html

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docs/2017-11/index.html

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docs/2017-12/index.html

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docs/2018-01/index.html

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docs/2018-02/index.html

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docs/2018-03/index.html

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docs/2018-04/index.html

@@ -21,7 +21,7 @@ Catalina logs at least show some memory errors yesterday:
 
 <meta property="article:published_time" content="2018-04-01T16:13:54&#43;02:00"/>
 
-<meta property="article:modified_time" content="2018-04-15T11:18:17&#43;03:00"/>
+<meta property="article:modified_time" content="2018-04-16T12:10:44&#43;03:00"/>
 
 
 
@@ -43,7 +43,7 @@ Catalina logs at least show some memory errors yesterday:
 
 
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@@ -53,9 +53,9 @@ Catalina logs at least show some memory errors yesterday:
   "@type": "BlogPosting",
   "headline": "April, 2018",
   "url": "https://alanorth.github.io/cgspace-notes/2018-04/",
-  "wordCount": "1613",
+  "wordCount": "1912",
   "datePublished": "2018-04-01T16:13:54&#43;02:00",
-  "dateModified": "2018-04-15T11:18:17&#43;03:00",
+  "dateModified": "2018-04-16T12:10:44&#43;03:00",
   "author": {
     "@type": "Person",
     "name": "Alan Orth"
@@ -494,6 +494,44 @@ Total time: 4 minutes 12 seconds
 <li>Communicate with Bioversity about their project to migrate their e-Library (Typo3) and Sci-lit databases to CGSpace</li>
 </ul>
 
+<h2 id="2018-04-18">2018-04-18</h2>
+
+<ul>
+<li>IWMI people are asking about building a search query that outputs RSS for their reports</li>
+<li>They want the same results as this Discovery query: <a href="https://cgspace.cgiar.org/discover?filtertype_1=dateAccessioned&amp;filter_relational_operator_1=contains&amp;filter_1=2018&amp;submit_apply_filter=&amp;query=&amp;scope=10568%2F16814&amp;rpp=100&amp;sort_by=dc.date.issued_dt&amp;order=desc">https://cgspace.cgiar.org/discover?filtertype_1=dateAccessioned&amp;filter_relational_operator_1=contains&amp;filter_1=2018&amp;submit_apply_filter=&amp;query=&amp;scope=10568%2F16814&amp;rpp=100&amp;sort_by=dc.date.issued_dt&amp;order=desc</a></li>
+<li>They will need to use OpenSearch, but I can&rsquo;t remember all the parameters</li>
+<li>Apparently search sort options for OpenSearch are in <code>dspace.cfg</code>:</li>
+</ul>
+
+<pre><code>webui.itemlist.sort-option.1 = title:dc.title:title
+webui.itemlist.sort-option.2 = dateissued:dc.date.issued:date
+webui.itemlist.sort-option.3 = dateaccessioned:dc.date.accessioned:date
+webui.itemlist.sort-option.4 = type:dc.type:text
+</code></pre>
+
+<ul>
+<li>They want items by issue date, so we need to use sort option 2</li>
+<li>According to the DSpace Manual there are only the following parameters to OpenSearch: format, scope, rpp, start, and sort_by</li>
+<li>The OpenSearch <code>query</code> parameter expects a Discovery search filter that is defined in <code>dspace/config/spring/api/discovery.xml</code></li>
+<li>So for IWMI they should be able to use something like this: <a href="https://cgspace.cgiar.org/open-search/discover?query=dateIssued:2018&amp;scope=10568/16814&amp;sort_by=2&amp;order=DESC&amp;format=rss">https://cgspace.cgiar.org/open-search/discover?query=dateIssued:2018&amp;scope=10568/16814&amp;sort_by=2&amp;order=DESC&amp;format=rss</a></li>
+<li>There are also <code>rpp</code> (results per page) and <code>start</code> parameters but in my testing now on DSpace 5.5 they behave very strangely</li>
+<li>For example, set <code>rpp=1</code> and then check the results for <code>start</code> values of 0, 1, and 2 and they are all the same!</li>
+<li>If I have time I will check if this behavior persists on DSpace 6.x on the official DSpace demo and file a bug</li>
+<li>Also, the DSpace Manual as of 5.x has very poor documentation for OpenSearch</li>
+<li>They don&rsquo;t tell you to use Discovery search filters in the <code>query</code> (with format <code>query=dateIssued:2018</code>)</li>
+<li>They don&rsquo;t tell you that the sort options are actually defined in <code>dspace.cfg</code> (ie, you need to use <code>2</code> instead of <code>dc.date.issued_dt</code>)</li>
+<li>They are missing the <code>order</code> parameter (ASC vs DESC)</li>
+<li>I notice that DSpace Test has crashed again, due to memory:</li>
+</ul>
+
+<pre><code># grep -c 'java.lang.OutOfMemoryError: Java heap space' /var/log/tomcat7/catalina.out
+178
+</code></pre>
+
+<ul>
+<li>I will increase the JVM heap size from 5120M to 6144M, though we don&rsquo;t have much room left to grow as DSpace Test (linode19) is using a smaller instance size than CGSpace</li>
+</ul>
+
   
 
   

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 <meta name="twitter:card" content="summary"/>
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 <meta name="twitter:description" content="Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."/>
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docs/sitemap.xml

@@ -4,7 +4,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/2018-04/</loc>
-    <lastmod>2018-04-15T11:18:17+03:00</lastmod>
+    <lastmod>2018-04-16T12:10:44+03:00</lastmod>
   </url>
   
   <url>
@@ -159,7 +159,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/</loc>
-    <lastmod>2018-04-15T11:18:17+03:00</lastmod>
+    <lastmod>2018-04-16T12:10:44+03:00</lastmod>
     <priority>0</priority>
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@@ -170,7 +170,7 @@
   
   <url>
     <loc>https://alanorth.github.io/cgspace-notes/tags/notes/</loc>
-    <lastmod>2018-04-15T11:18:17+03:00</lastmod>
+    <lastmod>2018-04-16T12:10:44+03:00</lastmod>
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@@ -182,13 +182,13 @@
   
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+    <lastmod>2018-04-16T12:10:44+03:00</lastmod>
     <priority>0</priority>
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   <url>
     <loc>https://alanorth.github.io/cgspace-notes/tags/</loc>
-    <lastmod>2018-04-15T11:18:17+03:00</lastmod>
+    <lastmod>2018-04-16T12:10:44+03:00</lastmod>
     <priority>0</priority>
   </url>
   

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docs/tags/notes/index.html

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docs/tags/notes/page/2/index.html

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docs/tags/notes/page/3/index.html

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docs/tags/notes/page/4/index.html

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