Maria asked me to update Charles Staver’s ORCID iD in the submission template and on CGSpace, as his name was lower case before, and now he has corrected it
Maria asked me to update Charles Staver’s ORCID iD in the submission template and on CGSpace, as his name was lower case before, and now he has corrected it
<li>Maria asked me to update Charles Staver’s ORCID iD in the submission template and on CGSpace, as his name was lower case before, and now he has corrected it
<ul>
<li>I updated the fifty-eight existing items on CGSpace</li>
</ul>
</li>
<li>Looking into the items Udana had asked about last week that were missing Altmetric donuts:
<li><ahref="https://hdl.handle.net/10568/103225">The first</a> is still missing its DOI, so I added it and <ahref="https://twitter.com/mralanorth/status/1245632619661766657">tweeted its handle</a> (after a few hours there was a donut with score 222)</li>
<li><ahref="https://hdl.handle.net/10568/106899">The second item</a> now has a donut with score 2 since I <ahref="https://twitter.com/mralanorth/status/1243158045540134913">tweeted its handle</a> last week</li>
<li><ahref="https://hdl.handle.net/10568/107258">The third item</a> now has a donut with score 1 since I <ahref="https://twitter.com/mralanorth/status/1243158786392625153">tweeted it</a> last week</li>
</ul>
</li>
<li>On the same note, the <ahref="https://hdl.handle.net/10568/106573">one item</a> Abenet pointed out last week now has a donut with score of 104 after I <ahref="https://twitter.com/mralanorth/status/1243163710241345536">tweeted it</a> last week</li>
<li>Altmetric responded about <ahref="https://hdl.handle.net/10568/101286">one item</a> that had no donut since at least 2019-12 and said they fixed some problems with their bot’s user agent
<ul>
<li>I decided to <ahref="https://twitter.com/mralanorth/status/1245703049445851140">tweet the item</a>, as I can’t remember if I ever did it before</li>
<li>Update PostgreSQL JDBC driver to version 42.2.12</li>
</ul>
<h2id="2020-04-07">2020-04-07</h2>
<ul>
<li>Yesterday Atmire sent me their <ahref="https://github.com/ilri/DSpace/pull/445">pull request for DSpace 6 modules</a></li>
<li>Peter pointed out that some items have his ORCID identifier (<code>cg.creator.id</code>) twice
<ul>
<li>I think this is because my early <code>add-orcid-identifiers.py</code> script was adding identifiers to existing records without properly checking if there was already one present (at first it only checked if there was one with the exact <code>place</code> value)</li>
<li>As a test I dropped all his ORCID identifiers and added them back with the <code>add-orcid-identifiers.py</code> script:</li>
</ul>
</li>
</ul>
<pre><code>$ psql -h localhost -U postgres dspace -c "DELETE FROM metadatavalue WHERE resource_type_id=2 AND metadata_field_id=240 AND text_value LIKE '%Ballantyne%';"
<li>I used this CSV with the script (all records with his name have the name standardized like this):</li>
</ul>
<pre><code>dc.contributor.author,cg.creator.id
"Ballantyne, Peter G.","Peter G. Ballantyne: 0000-0001-9346-2893"
</code></pre><ul>
<li>Then I tried another way, to identify all duplicate ORCID identifiers for a given resource ID and group them so I can see if count is greater than 1:</li>
</ul>
<pre><code>dspace=# \COPY (SELECT DISTINCT(resource_id, text_value) as distinct_orcid, COUNT(*) FROM metadatavalue WHERE resource_type_id = 2 AND metadata_field_id = 240 GROUP BY distinct_orcid ORDER BY count DESC) TO /tmp/2020-04-07-duplicate-orcids.csv WITH CSV HEADER;
COPY 15209
</code></pre><ul>
<li>Of those, about nine authors had duplicate ORCID identifiers over about thirty records, so I created a CSV with all their name variations and ORCID identifiers:</li>
</ul>
<pre><code>dc.contributor.author,cg.creator.id
"Ballantyne, Peter G.","Peter G. Ballantyne: 0000-0001-9346-2893"
<li>Then I deleted <em>all</em> their existing ORCID identifier records:</li>
</ul>
<pre><code>dspace=# DELETE FROM metadatavalue WHERE resource_type_id=2 AND metadata_field_id=240 AND text_value SIMILAR TO '%(0000-0001-6543-0798|0000-0001-9346-2893|0000-0002-6950-4018|0000-0002-7583-3811|0000-0002-8044-583X|0000-0002-8599-7895|0000-0003-0934-1218|0000-0003-2765-7101)%';
DELETE 994
</code></pre><ul>
<li>And then I added them again using the <code>add-orcid-identifiers</code> records:</li>
<li>I started testing the <ahref="https://github.com/ilri/DSpace/pull/445">pull request</a> sent by Atmire yesterday
<ul>
<li>I notice that we now need <code>yarn</code> to build, and I need to bump the Node.js <code>engine</code> version in our Mirage 2 theme in order to get it to build on Node.js 10.x</li>
