2023-07-04 07:03:36 +02:00
<!DOCTYPE html>
< html lang = "en" >
< head >
< meta charset = "utf-8" >
< meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" >
< meta property = "og:title" content = "CGSpace Notes" / >
< meta property = "og:description" content = "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." / >
< meta property = "og:type" content = "website" / >
< meta property = "og:url" content = "https://alanorth.github.io/cgspace-notes/" / >
2023-12-18 21:15:27 +01:00
< meta property = "og:updated_time" content = "2023-12-12T14:57:07+03:00" / >
2023-07-04 07:03:36 +02:00
< meta name = "twitter:card" content = "summary" / >
< meta name = "twitter:title" content = "CGSpace Notes" / >
< meta name = "twitter:description" content = "Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository." / >
2023-12-09 07:55:16 +01:00
< meta name = "generator" content = "Hugo 0.121.1" >
2023-07-04 07:03:36 +02:00
< script type = "application/ld+json" >
{
"@context": "http://schema.org",
"@type": "Blog",
"headline": "CGSpace Notes",
"url" : "https://alanorth.github.io/cgspace-notes/",
"author": {
"@type": "Person",
"name": "Alan Orth"
},
2023-12-02 08:38:09 +01:00
"dateModified": "2023-12-01T08:48:36+03:00",
2023-07-04 07:03:36 +02:00
"keywords": "notes, migration, notes",
"description":"Documenting day-to-day work on the [CGSpace](https://cgspace.cgiar.org) repository."
}
< / script >
< link rel = "canonical" href = "https://alanorth.github.io/cgspace-notes/" >
< title > CGSpace Notes< / title >
<!-- combined, minified CSS -->
< link href = "https://alanorth.github.io/cgspace-notes/css/style.c6ba80bc50669557645abe05f86b73cc5af84408ed20f1551a267bc19ece8228.css" rel = "stylesheet" integrity = "sha256-xrqAvFBmlVdkWr4F+GtzzFr4RAjtIPFVGiZ7wZ7Ogig=" crossorigin = "anonymous" >
<!-- minified Font Awesome for SVG icons -->
< script defer src = "https://alanorth.github.io/cgspace-notes/js/fontawesome.min.f5072c55a0721857184db93a50561d7dc13975b4de2e19db7f81eb5f3fa57270.js" integrity = "sha256-9QcsVaByGFcYTbk6UFYdfcE5dbTeLhnbf4HrXz+lcnA=" crossorigin = "anonymous" > < / script >
<!-- RSS 2.0 feed -->
< link rel = "alternate" type = "application/rss+xml" href = "https://alanorth.github.io/cgspace-notes/index.xml" title = "CGSpace Notes" / >
< / head >
< body >
< div class = "blog-masthead" >
< div class = "container" >
< nav class = "nav blog-nav" >
< a class = "nav-link active" href = "https://alanorth.github.io/cgspace-notes/" > Home< / a >
< / nav >
< / div >
< / div >
< header class = "blog-header" >
< div class = "container" >
< h1 class = "blog-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/" rel = "home" > CGSpace Notes< / a > < / h1 >
< p class = "lead blog-description" dir = "auto" > Documenting day-to-day work on the < a href = "https://cgspace.cgiar.org" > CGSpace< / a > repository.< / p >
< / div >
< / header >
< div class = "container" >
< div class = "row" >
< div class = "col-sm-8 blog-main" >
2023-12-02 08:38:09 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-06/" > June, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-06-01T10:51:07+03:00" > Tue Jun 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-06-01" > 2021-06-01< / h2 >
< ul >
< li > IWMI notified me that AReS was down with an HTTP 502 error
< ul >
< li > Looking at UptimeRobot I see it has been down for 33 hours, but I never got a notification< / li >
< li > I don’ t see anything in the Elasticsearch container logs, or the systemd journal on the host, but I notice that the < code > angular_nginx< / code > container isn’ t running< / li >
< li > I simply started it and AReS was running again:< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-06/' > Read more →< / a >
< / article >
2023-11-08 06:20:31 +01:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-05/" > May, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-05-02T09:50:54+03:00" > Sun May 02, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-05-01" > 2021-05-01< / h2 >
< ul >
< li > I looked at the top user agents and IPs in the Solr statistics for last month and I see these user agents:
< ul >
< li > “ RI/1.0” , 1337< / li >
< li > “ Microsoft Office Word 2014” , 941< / li >
< / ul >
< / li >
< li > I will add the RI/1.0 pattern to our DSpace agents overload and purge them from Solr (we had previously seen this agent with 9,000 hits or so in 2020-09), but I think I will leave the Microsoft Word one… as that’ s an actual user… < / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-05/' > Read more →< / a >
< / article >
2023-10-04 08:24:33 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-04/" > April, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-04-01T09:50:54+03:00" > Thu Apr 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-04-01" > 2021-04-01< / h2 >
< ul >
< li > I wrote a script to query Sherpa’ s API for our ISSNs: < code > sherpa-issn-lookup.py< / code >
< ul >
< li > I’ m curious to see how the results compare with the results from Crossref yesterday< / li >
< / ul >
< / li >
< li > AReS Explorer was down since this morning, I didn’ t see anything in the systemd journal
< ul >
< li > I simply took everything down with docker-compose and then back up, and then it was OK< / li >
< li > Perhaps one of the containers crashed, I should have looked closer but I was in a hurry< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-04/' > Read more →< / a >
< / article >
2023-09-02 16:37:15 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-03/" > March, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-03-01T10:13:54+02:00" > Mon Mar 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-03-01" > 2021-03-01< / h2 >
< ul >
< li > Discuss some OpenRXV issues with Abdullah from CodeObia
< ul >
< li > He’ s trying to work on the DSpace 6+ metadata schema autoimport using the DSpace 6+ REST API< / li >
< li > Also, we found some issues building and running OpenRXV currently due to ecosystem shift in the Node.js dependencies< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-03/' > Read more →< / a >
< / article >
2023-08-04 17:05:44 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/" > CGSpace CG Core v2 Migration< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-02-21T13:27:35+02:00" > Sun Feb 21, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< span class = "fas fa-tag" aria-hidden = "true" > < / span > < a href = "/tags/migration/" rel = "tag" > Migration< / a >
< / p >
< / header >
< p > Changes to CGSpace metadata fields to align more with DC, QDC, and DCTERMS as well as CG Core v2. Implemented on 2021-02-21.< / p >
< p > With reference to < a href = "https://agriculturalsemantics.github.io/cg-core/cgcore.html" > CG Core v2 draft standard< / a > by Marie-Angélique as well as < a href = "http://www.dublincore.org/specifications/dublin-core/dcmi-terms/" > DCMI DCTERMS< / a > .< / p >
< a href = 'https://alanorth.github.io/cgspace-notes/cgspace-cgcorev2-migration/' > Read more →< / a >
< / article >
2023-07-04 07:03:36 +02:00
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-02/" > February, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-02-01T10:13:54+02:00" > Mon Feb 01, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-02-01" > 2021-02-01< / h2 >
< ul >
< li > Abenet said that CIP found more duplicate records in their export from AReS
< ul >
< li > I re-opened < a href = "https://github.com/ilri/OpenRXV/issues/67" > the issue< / a > on OpenRXV where we had previously noticed this< / li >
< li > The shared link where the duplicates are is here: < a href = "https://cgspace.cgiar.org/explorer/shared/heEOz3YBnXdK69bR2ra6" > https://cgspace.cgiar.org/explorer/shared/heEOz3YBnXdK69bR2ra6< / a > < / li >
< / ul >
< / li >
< li > I had a call with CodeObia to discuss the work on OpenRXV< / li >
< li > Check the results of the AReS harvesting from last night:< / li >
< / ul >
< div class = "highlight" > < pre tabindex = "0" style = "color:#f8f8f2;background-color:#272822;-moz-tab-size:4;-o-tab-size:4;tab-size:4;" > < code class = "language-console" data-lang = "console" > < span style = "display:flex;" > < span > $ curl -s < span style = "color:#e6db74" > ' http://localhost:9200/openrxv-items-temp/_count?q=*& pretty' < / span >
< / span > < / span > < span style = "display:flex;" > < span > {
< / span > < / span > < span style = "display:flex;" > < span > " count" : 100875,
< / span > < / span > < span style = "display:flex;" > < span > " _shards" : {
< / span > < / span > < span style = "display:flex;" > < span > " total" : 1,
< / span > < / span > < span style = "display:flex;" > < span > " successful" : 1,
< / span > < / span > < span style = "display:flex;" > < span > " skipped" : 0,
< / span > < / span > < span style = "display:flex;" > < span > " failed" : 0
< / span > < / span > < span style = "display:flex;" > < span > }
< / span > < / span > < span style = "display:flex;" > < span > }
< / span > < / span > < / code > < / pre > < / div >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-02/' > Read more →< / a >
< / article >
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2021-01/" > January, 2021< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2021-01-03T10:13:54+02:00" > Sun Jan 03, 2021< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2021-01-03" > 2021-01-03< / h2 >
< ul >
< li > Peter notified me that some filters on AReS were broken again
< ul >
< li > It’ s the same issue with the field names getting < code > .keyword< / code > appended to the end that I already < a href = "https://github.com/ilri/OpenRXV/issues/66" > filed an issue on OpenRXV about last month< / a > < / li >
< li > I fixed the broken filters (careful to not edit any others, lest they break too!)< / li >
< / ul >
< / li >
< li > Fix an issue with start page number for the DSpace REST API and statistics API in OpenRXV
< ul >
< li > The start page had been “ 1” in the UI, but in the backend they were doing some gymnastics to adjust to the zero-based offset/limit/page of the DSpace REST API and the statistics API< / li >
< li > I adjusted it to default to 0 and added a note to the admin screen< / li >
< li > I realized that this issue was actually causing the first page of 100 statistics to be missing… < / li >
< li > For example, < a href = "https://cgspace.cgiar.org/handle/10568/66839" > this item< / a > has 51 views on CGSpace, but 0 on AReS< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2021-01/' > Read more →< / a >
< / article >
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-12/" > December, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-12-01T11:32:54+02:00" > Tue Dec 01, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2020-12-01" > 2020-12-01< / h2 >
< ul >
< li > Atmire responded about the issue with duplicate data in our Solr statistics
< ul >
< li > They noticed that some records in the statistics-2015 core haven’ t been migrated with the AtomicStatisticsUpdateCLI tool yet and assumed that I haven’ t migrated any of the records yet< / li >
< li > That’ s strange, as I checked all ten cores and 2015 is the only one with some unmigrated documents, as according to the < code > cua_version< / code > field< / li >
< li > I started processing those (about 411,000 records):< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-12/' > Read more →< / a >
< / article >
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/cgspace-dspace6-upgrade/" > CGSpace DSpace 6 Upgrade< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-11-15T13:27:35+02:00" > Sun Nov 15, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< span class = "fas fa-tag" aria-hidden = "true" > < / span > < a href = "/tags/migration/" rel = "tag" > Migration< / a >
< / p >
< / header >
< p > Notes about the DSpace 6 upgrade on CGSpace in 2020-11.< / p >
< a href = 'https://alanorth.github.io/cgspace-notes/cgspace-dspace6-upgrade/' > Read more →< / a >
< / article >
< article class = "blog-post" >
< header >
< h2 class = "blog-post-title" dir = "auto" > < a href = "https://alanorth.github.io/cgspace-notes/2020-11/" > November, 2020< / a > < / h2 >
< p class = "blog-post-meta" > < time datetime = "2020-11-01T13:11:54+02:00" > Sun Nov 01, 2020< / time > by Alan Orth in
< span class = "fas fa-folder" aria-hidden = "true" > < / span > < a href = "/categories/notes/" rel = "category tag" > Notes< / a >
< / p >
< / header >
< h2 id = "2020-11-01" > 2020-11-01< / h2 >
< ul >
< li > Continue with processing the statistics-2019 Solr core with the AtomicStatisticsUpdateCLI tool on DSpace Test
< ul >
< li > So far we’ ve spent at least fifty hours to process the statistics and statistics-2019 core… wow.< / li >
< / ul >
< / li >
< / ul >
< a href = 'https://alanorth.github.io/cgspace-notes/2020-11/' > Read more →< / a >
< / article >
< nav class = "blog-pagination" >
< a class = "btn btn-outline-primary" href = "/cgspace-notes/page/3/" rel = "prev" role = "button" > Previous page< / a >
< a class = "btn btn-outline-primary" href = "/cgspace-notes/page/5/" rel = "next" role = "button" > Next page< / a >
< / nav >
< / div > <!-- /.blog - main -->
< aside class = "col-sm-3 ml-auto blog-sidebar" >
< section class = "sidebar-module" >
< h4 > Recent Posts< / h4 >
< ol class = "list-unstyled" >
2023-12-02 08:38:09 +01:00
< li > < a href = "/cgspace-notes/2023-12/" > December, 2023< / a > < / li >
2023-11-08 06:20:31 +01:00
< li > < a href = "/cgspace-notes/2023-11/" > November, 2023< / a > < / li >
2023-10-04 08:24:33 +02:00
< li > < a href = "/cgspace-notes/2023-10/" > October, 2023< / a > < / li >
2023-09-02 16:37:15 +02:00
< li > < a href = "/cgspace-notes/2023-09/" > September, 2023< / a > < / li >
2023-08-04 17:05:44 +02:00
< li > < a href = "/cgspace-notes/2023-08/" > August, 2023< / a > < / li >
2023-07-04 07:03:36 +02:00
< / ol >
< / section >
< section class = "sidebar-module" >
< h4 > Links< / h4 >
< ol class = "list-unstyled" >
< li > < a href = "https://cgspace.cgiar.org" > CGSpace< / a > < / li >
< li > < a href = "https://dspacetest.cgiar.org" > DSpace Test< / a > < / li >
< li > < a href = "https://github.com/ilri/DSpace" > CGSpace @ GitHub< / a > < / li >
< / ol >
< / section >
< / aside >
< / div > <!-- /.row -->
< / div > <!-- /.container -->
< footer class = "blog-footer" >
< p dir = "auto" >
Blog template created by < a href = "https://twitter.com/mdo" > @mdo< / a > , ported to Hugo by < a href = 'https://twitter.com/mralanorth' > @mralanorth< / a > .
< / p >
< p >
< a href = "#" > Back to top< / a >
< / p >
< / footer >
< / body >
< / html >
