cgspace-notes/content/posts/2023-01.md

---
title: "January, 2023"
date: 2023-01-01T08:44:36+03:00
author: "Alan Orth"
categories: ["Notes"]
---

## 2023-01-01

- Apply some more ORCID identifiers to items on CGSpace using my `2022-09-22-add-orcids.csv` file
  - I want to update all ORCID names and refresh them in the database
  - I see we have some new ones that aren't in our list if I combine with this file:

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```console
$ cat dspace/config/controlled-vocabularies/cg-creator-identifier.xml | grep - oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort -u | wc -l                         
1939
$ cat dspace/config/controlled-vocabularies/cg-creator-identifier.xml 2022-09-22-add-orcids.csv| grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort -u | wc -l
1973
```

- I will extract and process them with my `resolve-orcids.py` script:

```console
$ cat dspace/config/controlled-vocabularies/cg-creator-identifier.xml 2022-09-22-add-orcids.csv| grep -oE '[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}-[A-Z0-9]{4}' | sort -u > /tmp/2023-01-01-orcids.txt
$ ./ilri/resolve-orcids.py -i /tmp/2023-01-01-orcids.txt -o /tmp/2023-01-01-orcids-names.txt -d
```

- 

```console
$ ./ilri/update-orcids.py -i /tmp/2023-01-01-orcids-names.txt -db dspace -u dspace -p 'fuuu' -m 247
```

- Load on CGSpace is high around 9.x
  - I see there is a CIAT bot harvesting via the REST API with IP 45.5.186.2
  - Other than that I don't see any particular system stats as alarming
  - There has been a marked increase in load in the last few weeks, perhaps due to Initiative activity...
  - Perhaps there are some stuck PostgreSQL locks from CLI tools?

```console
$ psql -c 'SELECT * FROM pg_locks pl LEFT JOIN pg_stat_activity psa ON pl.pid = psa.pid;' | grep -o -E '(dspaceWeb|dspaceApi|dspaceCli)' | sort | uniq -c
     58 dspaceCli
     46 dspaceWeb
```

- The current time on the server is 08:52 and I see the dspaceCli locks were started at 04:00 and 05:00... so I need to check which cron jobs those belong to as I think I noticed this last month too
  - I'm going to wait and see if they finish, but by tomorrow I will kill them

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