alanorth/cgspace-notes
1
0
Fork 0
mirror of https://github.com/alanorth/cgspace-notes.git synced 2024-11-04 14:23:01 +01:00
Code Issues Projects Releases Wiki Activity
28ab384194
cgspace-notes/docs/2018-09/index.html

247 lines
12 KiB
HTML
Raw Normal View History

Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta property="og:title" content="September, 2018" />
<meta property="og:description" content="2018-09-02
New PostgreSQL JDBC driver version 42.2.5
Update notes for 2018-09-02
2018-09-02 16:37:18 +02:00
I&rsquo;ll update the DSpace role in our Ansible infrastructure playbooks and run the updated playbooks on CGSpace and DSpace Test
Also, I&rsquo;ll re-run the postgresql tasks because the custom PostgreSQL variables are dynamic according to the system&rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&rsquo;m getting those autowire errors in Tomcat 8.5.30 again:
" />
<meta property="og:type" content="article" />
Add notes for 2018-09-03
2018-09-03 15:47:24 +02:00
<meta property="og:url" content="https://alanorth.github.io/cgspace-notes/2018-09/" /><meta property="article:published_time" content="2018-09-02T09:55:54&#43;03:00"/>
Add notes for 2018-09-04
2018-09-04 12:25:13 +02:00
<meta property="article:modified_time" content="2018-09-03T16:47:24&#43;03:00"/>
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<meta name="twitter:card" content="summary"/>
<meta name="twitter:title" content="September, 2018"/>
<meta name="twitter:description" content="2018-09-02
New PostgreSQL JDBC driver version 42.2.5
Update notes for 2018-09-02
2018-09-02 16:37:18 +02:00
I&rsquo;ll update the DSpace role in our Ansible infrastructure playbooks and run the updated playbooks on CGSpace and DSpace Test
Also, I&rsquo;ll re-run the postgresql tasks because the custom PostgreSQL variables are dynamic according to the system&rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&rsquo;m getting those autowire errors in Tomcat 8.5.30 again:
"/>
Add notes for 2018-09-03
2018-09-03 15:47:24 +02:00
<meta name="generator" content="Hugo 0.48" />
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "BlogPosting",
"headline": "September, 2018",
"url": "https://alanorth.github.io/cgspace-notes/2018-09/",
Add notes for 2018-09-04
2018-09-04 12:25:13 +02:00
"wordCount": "538",
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
"datePublished": "2018-09-02T09:55:54&#43;03:00",
Add notes for 2018-09-04
2018-09-04 12:25:13 +02:00
"dateModified": "2018-09-03T16:47:24&#43;03:00",
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
"author": {
"@type": "Person",
"name": "Alan Orth"
},
"keywords": "Notes"
}
</script>
<link rel="canonical" href="https://alanorth.github.io/cgspace-notes/2018-09/">
<title>September, 2018 | CGSpace Notes</title>
<!-- combined, minified CSS -->
<link href="https://alanorth.github.io/cgspace-notes/css/style.css" rel="stylesheet" integrity="sha384-Upm5uY/SXdvbjuIGH6fBjF5vOYUr9DguqBskM&#43;EQpLBzO9U&#43;9fMVmWEt&#43;TTlGrWQ" crossorigin="anonymous">
</head>
<body>
<div class="blog-masthead">
<div class="container">
<nav class="nav blog-nav">
<a class="nav-link " href="https://alanorth.github.io/cgspace-notes/">Home</a>
</nav>
</div>
</div>
<header class="blog-header">
<div class="container">
<h1 class="blog-title"><a href="https://alanorth.github.io/cgspace-notes/" rel="home">CGSpace Notes</a></h1>
<p class="lead blog-description">Documenting day-to-day work on the <a href="https://cgspace.cgiar.org">CGSpace</a> repository.</p>
</div>
</header>
<div class="container">
<div class="row">
<div class="col-sm-8 blog-main">
<article class="blog-post">
<header>
<h2 class="blog-post-title"><a href="https://alanorth.github.io/cgspace-notes/2018-09/">September, 2018</a></h2>
<p class="blog-post-meta"><time datetime="2018-09-02T09:55:54&#43;03:00">Sun Sep 02, 2018</time> by Alan Orth in
<i class="fa fa-tag" aria-hidden="true"></i>&nbsp;<a href="/cgspace-notes/tags/notes" rel="tag">Notes</a>
</p>
</header>
<h2 id="2018-09-02">2018-09-02</h2>
<ul>
<li>New <a href="https://jdbc.postgresql.org/documentation/changelog.html#version_42.2.5">PostgreSQL JDBC driver version 42.2.5</a></li>
Update notes for 2018-09-02
2018-09-02 16:37:18 +02:00
<li>I&rsquo;ll update the DSpace role in our <a href="https://github.com/ilri/rmg-ansible-public">Ansible infrastructure playbooks</a> and run the updated playbooks on CGSpace and DSpace Test</li>
<li>Also, I&rsquo;ll re-run the <code>postgresql</code> tasks because the custom PostgreSQL variables are dynamic according to the system&rsquo;s RAM, and we never re-ran them after migrating to larger Linodes last month</li>
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<li>I&rsquo;m testing the new DSpace 5.8 branch in my Ubuntu 18.04 environment and I&rsquo;m getting those autowire errors in Tomcat 8.5.30 again:</li>
</ul>
<p></p>
<pre><code>02-Sep-2018 11:18:52.678 SEVERE [localhost-startStop-1] org.apache.catalina.core.StandardContext.listenerStart Exception sending context initialized event to listener instance of class [org.dspace.servicemanager.servlet.DSpaceKernelServletContextListener]
java.lang.RuntimeException: Failure during filter init: Failed to startup the DSpace Service Manager: failure starting up spring service manager: Error creating bean with name 'conversionService' defined in file [/home/dspacetest.cgiar.org/config/spring/xmlui/spring-dspace-addon-cua-services.xml]: Cannot create inner bean 'com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter#4c5d5a2' of type [com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter] while setting bean property 'converters' with key [1]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter#4c5d5a2': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Could not autowire field: private com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$FilterConverter com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter.filterConverter; nested exception is org.springframework.beans.factory.NoSuchBeanDefinitionException: No matching bean of type [com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$FilterConverter] found for dependency: expected at least 1 bean which qualifies as autowire candidate for this dependency. Dependency annotations: {@org.springframework.beans.factory.annotation.Autowired(required=true)}
at org.dspace.servicemanager.servlet.DSpaceKernelServletContextListener.contextInitialized(DSpaceKernelServletContextListener.java:92)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4776)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5240)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:754)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:730)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:734)
at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:629)
at org.apache.catalina.startup.HostConfig$DeployDescriptor.run(HostConfig.java:1838)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.RuntimeException: Failed to startup the DSpace Service Manager: failure starting up spring service manager: Error creating bean with name 'conversionService' defined in file [/home/dspacetest.cgiar.org/config/spring/xmlui/spring-dspace-addon-cua-services.xml]: Cannot create inner bean 'com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter#4c5d5a2' of type [com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter] while setting bean property 'converters' with key [1]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter#4c5d5a2': Injection of autowired dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Could not autowire field: private com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$FilterConverter com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$ColumnsConverter.filterConverter; nested exception is org.springframework.beans.factory.NoSuchBeanDefinitionException: No matching bean of type [com.atmire.app.xmlui.aspect.statistics.mostpopular.MostPopularConfig$FilterConverter] found for dependency: expected at least 1 bean which qualifies as autowire candidate for this dependency. Dependency annotations:
</code></pre>
<ul>
<li>Full log here: <a href="https://gist.github.com/alanorth/1e4ae567b853fea9d9dbf1a030ecd8c2">https://gist.github.com/alanorth/1e4ae567b853fea9d9dbf1a030ecd8c2</a></li>
Update notes for 2018-09-02
2018-09-02 11:07:04 +02:00
<li>XMLUI fails to load, but the REST, SOLR, JSPUI, etc work</li>
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<li>The old <code>5_x-prod-dspace-5.5</code> branch does work in Ubuntu 18.04 with Tomcat 8.5.30-1ubuntu1.4, however!</li>
<li>And the <code>5_x-prod</code> DSpace 5.8 branch does work in Tomcat 8.5.x on my Arch Linux laptop&hellip;</li>
<li>I&rsquo;m not sure where the issue is then!</li>
</ul>
Add notes for 2018-09-03
2018-09-03 15:47:24 +02:00
<h2 id="2018-09-03">2018-09-03</h2>
<ul>
<li>Abenet says she&rsquo;s getting three emails about periodic statistics reports every day since the DSpace 5.8 upgrade last week</li>
<li>They are from the CUA module</li>
<li>Two of them have &ldquo;no data&rdquo; and one has a &ldquo;null&rdquo; title</li>
<li>The last one is a report of the top downloaded items, and includes a graph</li>
<li>She will try to click the &ldquo;Unsubscribe&rdquo; link in the first two to see if it works, otherwise we should contact Atmire</li>
<li>The only one she remembers subscribing to is the top downloads one</li>
</ul>
Add notes for 2018-09-04
2018-09-04 12:25:13 +02:00
<h2 id="2018-09-04">2018-09-04</h2>
<ul>
<li>I&rsquo;m looking over the latest round of IITA records from Sisay: <a href="https://dspacetest.cgiar.org/handle/10568/104230">Mercy1806_August_29</a>
<ul>
<li>All fields are split with multiple columns like <code>cg.authorship.types</code> and <code>cg.authorship.types[]</code></li>
<li>This makes it super annoying to do the checks and cleanup, so I will merge them (also time consuming)</li>
<li>Five issue dates had values like <code>2013-5</code> so I corrected them to be <code>2013-05</code></li>
<li>Several metadata fields had values with newlines in them (even in some titles!), which I fixed by trimming the consecutive whitespaces in Open Refine</li>
</ul></li>
</ul>
Add notes for 2018-09-02
2018-09-02 11:03:43 +02:00
<!-- vim: set sw=2 ts=2: -->
</article>
</div> <!-- /.blog-main -->
<aside class="col-sm-3 ml-auto blog-sidebar">
<section class="sidebar-module">
<h4>Recent Posts</h4>
<ol class="list-unstyled">
<li><a href="/cgspace-notes/2018-09/">September, 2018</a></li>
<li><a href="/cgspace-notes/2018-08/">August, 2018</a></li>
<li><a href="/cgspace-notes/2018-07/">July, 2018</a></li>
<li><a href="/cgspace-notes/2018-06/">June, 2018</a></li>
<li><a href="/cgspace-notes/2018-05/">May, 2018</a></li>
</ol>
</section>
<section class="sidebar-module">
<h4>Links</h4>
<ol class="list-unstyled">
<li><a href="https://cgspace.cgiar.org">CGSpace</a></li>
<li><a href="https://dspacetest.cgiar.org">DSpace Test</a></li>
<li><a href="https://github.com/ilri/DSpace">CGSpace @ GitHub</a></li>
</ol>
</section>
</aside>
</div> <!-- /.row -->
</div> <!-- /.container -->
<footer class="blog-footer">
<p>
Blog template created by <a href="https://twitter.com/mdo">@mdo</a>, ported to Hugo by <a href='https://twitter.com/mralanorth'>@mralanorth</a>.
</p>
<p>
<a href="#">Back to top</a>
</p>
</footer>
</body>
</html>
Reference in New Issue Copy Permalink