<li>Testing adding <ahref="https://wiki.duraspace.org/display/DSDOC5x/ORCID+Integration#ORCIDIntegration-EditingexistingitemsusingBatchCSVEditing">ORCIDs to a CSV</a> file for a single item to see if the author orders get messed up</li>
<li>Need to test the following scenarios to see how author order is affected:
<ul>
<li>ORCIDs only</li>
<li>ORCIDs plus normal authors</li>
</ul></li>
<li>I exported a random item’s metadata as CSV, deleted <em>all columns</em> except id and collection, and made a new coloum called <code>ORCID:dc.contributor.author</code> with the following random ORCIDs from the ORCID registry:</li>
<li>Hmm, with the <code>dc.contributor.author</code> column removed, DSpace doesn’t detect any changes</li>
<li>With a blank <code>dc.contributor.author</code> column, DSpace wants to remove all non-ORCID authors and add the new ORCID authors</li>
<li>I added the <ahref="https://github.com/ilri/DSpace/issues/234">disclaimer text</a> to the About page, then added a footer link to the disclaimer’s ID, but there is a Bootstrap issue that causes the page content to disappear when using in-page anchors: <ahref="https://github.com/twbs/bootstrap/issues/1768">https://github.com/twbs/bootstrap/issues/1768</a></li>
</ul>
<p><imgsrc="2016/10/bootstrap-issue.png"alt="Bootstrap issue with in-page anchors"/></p>
<ul>
<li>Looks like we’ll just have to add the text to the About page (without a link) or add a separate page</li>
<pre><code>dspacetest=# \copy (select distinct text_value, count(*) as count from metadatavalue where metadata_field_id = (select metadata_field_id from metadatafieldregistry where element = 'contributor' and qualifier = 'author') AND resource_type_id = 2 AND resource_id IN (select item_id from collection2item where collection_id IN (select resource_id from handle where handle in ('10568/32729', '10568/5472', '10568/5473', '10568/10288', '10568/70974', '10568/3547', '10568/3549', '10568/3531','10568/16890','10568/5470','10568/3546', '10568/36024', '10568/66581', '10568/21789', '10568/5469', '10568/5468', '10568/3548', '10568/71053', '10568/25167'))) group by text_value order by count desc) to /tmp/ccafs-authors.csv with csv;
<li>Clean up Let’s Encrypt plumbing and submit pull request for rmg-ansible-public (<ahref="https://github.com/ilri/rmg-ansible-public/pull/60">#60</a>)</li>
</ul>
<h2id="2016-10-06">2016-10-06</h2>
<ul>
<li>Nice! DSpace Test (linode02) is now having <code>java.lang.OutOfMemoryError: Java heap space</code> errors…</li>
<li>Heap space is 2048m, and we have 5GB of RAM being used for OS cache (Solr!) so let’s just bump the memory to 3072m</li>
<li>Magdalena from CCAFS asked why the colors in the thumbnails for these <ahref="https://cgspace.cgiar.org/handle/10568/71249">two</a><ahref="https://cgspace.cgiar.org/handle/10568/71259">items</a> look different, even though they are the same in the PDF itself</li>
</ul>
<p><imgsrc="2016/10/cmyk-vs-srgb.jpg"alt="CMYK vs sRGB colors"/></p>
<ul>
<li>Turns out the first PDF was exported from InDesign using CMYK and the second one was using sRGB</li>
<li>Run all system updates on DSpace Test and reboot it</li>
<li>Re-deploy CGSpace with latest changes from late September and early October</li>
<li>Run fixes for ILRI subjects and delete blank metadata values:</li>
</ul>
<pre><code>dspace=# delete from metadatavalue where resource_type_id=2 and text_value='';
DELETE 11
</code></pre>
<ul>
<li>Run all system updates and reboot CGSpace</li>
<li>Delete ten gigs of old 2015 Tomcat logs that never got rotated (WTF?):</li>
</ul>
<pre><code>root@linode01:~# ls -lh /var/log/tomcat7/localhost_access_log.2015* | wc -l
47
</code></pre>
<ul>
<li>Delete 2GB <code>cron-filter-media.log</code> file, as it is just a log from a cron job and it doesn’t get rotated like normal log files (almost a year now maybe)</li>
<li>Run all system updates on DSpace Test and reboot server</li>
<li>Looking into some issues with Discovery filters in Atmire’s content and usage analysis module after adjusting the filter class</li>
<li>Looks like changing the filters from <code>configuration.DiscoverySearchFilterFacet</code> to <code>configuration.DiscoverySearchFilter</code> breaks them in Atmire CUA module</li>
